bash process data from two files - bash

file1:
456
445
2323
file2:
433
456
323
I want get the deficit of the data in the two files and output to output.txt, that is:
23
-11
2000
How do I realize this? thank you.

$ paste file1 file2 | awk '{ print $1 - $2 }'
23
-11
2000

Use paste to create the formulae, and use bc to perform the calculations:
paste -d - file1 file2 | bc

In pure bash, with no external tools:
while read -u 4 line1 && read -u 5 line2; do
printf '%s\n' "$(( line1 - line2 ))"
done 4<file1 5<file2
This works by opening both files (attaching them to file descriptors 4 and 5); going into a loop in which we read one line from each descriptor per iteration (exiting the loop if either has no value), and calculate and print the result.

You could use paste and awk to operate between columns:
paste -d" " file1 file2 | awk -F" " '{print ($1-$2)}'
Or even pipe to a file:
paste -d" " file1 file2 | awk -F" " '{print ($1-$2)}' > output.txt
Hope it helps!

Related

How to merge in one file, two files in bash line by line [duplicate]

What's the easiest/quickest way to interleave the lines of two (or more) text files? Example:
File 1:
line1.1
line1.2
line1.3
File 2:
line2.1
line2.2
line2.3
Interleaved:
line1.1
line2.1
line1.2
line2.2
line1.3
line2.3
Sure it's easy to write a little Perl script that opens them both and does the task. But I was wondering if it's possible to get away with fewer code, maybe a one-liner using Unix tools?
paste -d '\n' file1 file2
Here's a solution using awk:
awk '{print; if(getline < "file2") print}' file1
produces this output:
line 1 from file1
line 1 from file2
line 2 from file1
line 2 from file2
...etc
Using awk can be useful if you want to add some extra formatting to the output, for example if you want to label each line based on which file it comes from:
awk '{print "1: "$0; if(getline < "file2") print "2: "$0}' file1
produces this output:
1: line 1 from file1
2: line 1 from file2
1: line 2 from file1
2: line 2 from file2
...etc
Note: this code assumes that file1 is of greater than or equal length to file2.
If file1 contains more lines than file2 and you want to output blank lines for file2 after it finishes, add an else clause to the getline test:
awk '{print; if(getline < "file2") print; else print ""}' file1
or
awk '{print "1: "$0; if(getline < "file2") print "2: "$0; else print"2: "}' file1
#Sujoy's answer points in a useful direction. You can add line numbers, sort, and strip the line numbers:
(cat -n file1 ; cat -n file2 ) | sort -n | cut -f2-
Note (of interest to me) this needs a little more work to get the ordering right if instead of static files you use the output of commands that may run slower or faster than one another. In that case you need to add/sort/remove another tag in addition to the line numbers:
(cat -n <(command1...) | sed 's/^/1\t/' ; cat -n <(command2...) | sed 's/^/2\t/' ; cat -n <(command3) | sed 's/^/3\t/' ) \
| sort -n | cut -f2- | sort -n | cut -f2-
With GNU sed:
sed 'R file2' file1
Output:
line1.1
line2.1
line1.2
line2.2
line1.3
line2.3
Here's a GUI way to do it: Paste them into two columns in a spreadsheet, copy all cells out, then use regular expressions to replace tabs with newlines.
cat file1 file2 |sort -t. -k 2.1
Here its specified that the separater is "." and that we are sorting on the first character of the second field.

bash shell-How to swift a file specific content with another file after a match pattern found

>cat file1.txt
aa bb
ccc dd
ee fff
>cat file2.txt
1
2
3
I want to get the result like below:
aa1bb
ccc2dd
ee3fff
The space in file1.txt will be replaced by number in file2.txt.
paste + awk approach:
paste file1.txt file2.txt | awk '{ print $1$3$2 }'
The output:
aa1bb
ccc2dd
ee3fff
A straight forward way by awk,
$ awk 'NR==FNR{a[NR]=$0;next}{sub(/\ /,a[FNR])}1' file2 file1
aa1bb
ccc2dd
ee3fff
Brief explanation,
NR==FNR{a[NR]=$0;next}: store each record in file2 to array a
sub(/\ /,a[FNR]): substitute the space by a[FNR] in file2, where FNR would be the record number in the file2.
Appended 1would print each processed line in file2
This works:
$ paste <(cut -d " " -f1 file1.txt) file2.txt <(cut -d " " -f2 file1.txt) | tr -d $'\t'
aa1bb
ccc2dd
ee3fff
with a bash while-read loop
while read -u3 a b; read -u4 n; do
echo "$a$n$b"
done 3<file1.txt 4<file2.txt

Bind two files by column in bash

when i have two files such as file A
012
658
458
895
235
and file B
1
2
3
4
5
how could they be joined in bash? The output shoudl just be
1012
2658
3458
4895
5235
really I just want to bind by column such as in R (cbind).
Assuming columns are in equal length in both files, you can use paste command:
paste --delimiters='' fileB fileA
The default delimiter for paste command is TAB. So '' make sure no delimiter is in place.
Like this maybe:
paste -d'\0' B A
Or, if you like awk:
awk 'FNR==NR{A[FNR]=$0;next} {print $0,A[FNR]}' OFS='' A B
Using pure Bash and no external commands:
while read -u 3 A && read -u 4 B; do
echo "${B}${A}"
done 3< File_A.txt 4< File_B.txt
grep "run complete" *.err | awk -F: '{print $1}'|sort > a
ls ../bam/*bam | grep -v temp | awk -F[/_] '{print $3".err"}' | sort > b
diff <(grep "run complete" *.err | awk -F: '{print $1}'|sort) <(ls ../bam/*bam | grep -v temp | awk -F[/_] '{print $3".err"}' )
paste a b

Need to replace a character in file2 with string in file1

Here is what I am trying to do.
File1:
abc
bcd
cde
def
efg
fgh
ghi
File2:
ip:/vol0/scratch/&
ip:/vol0/sysbuild/
ip:/vol0/cde
ip:/vol0/mnt/cm/&
ip:/vol0/&
ip:/vol0/mnt/fgh
ip:/vol0/mnt/&
As you can see File2 has & at the end of some lines, I need to replace the & with corresponding line in File1 and ignore the lines without the & For example, if line 2 and line 3 doesn't have & the script would skip line 2 and 3 in both files and go to line 4 to replace the &
How would I achieve this with shell script.
Using paste and awk:
$ paste file2 file1 | awk 'sub(/&\s+/,"")'
ip:/vol0/scratch/abc
ip:/vol0/mnt/cm/def
ip:/vol0/efg
ip:/vol0/mnt/ghi
Wasn't 100% clear if you wanted the lines not ending in & in the output:
$ paste file2 file1 | awk '{sub(/&\s+/,"");print $1}'
ip:/vol0/scratch/abc
ip:/vol0/sysbuild/
ip:/vol0/cde
ip:/vol0/mnt/cm/def
ip:/vol0/efg
ip:/vol0/mnt/fgh
ip:/vol0/mnt/ghi
With sed:
$ paste file2 file1 | sed -rn '/&/s/&\s+//p'
ip:/vol0/scratch/abc
ip:/vol0/mnt/cm/def
ip:/vol0/efg
ip:/vol0/mnt/ghi
awk 'NR==FNR{a[NR]=$0;next} sub(/&/,a[FNR])' file1 file2
paste file1 file2 | awk 'gsub( /&/, $1 )' | cut -f2-
try this
awk '{if (NR == FNR){f[NR]= $0;}else {gsub("&",f[FNR],$0); print $0}}' file1.txt file2.txt
This might work for you (GNU sed):
sed = file1 | sed -r 'N;s/(.*)\n(.*)/\1s|\&$|\2|/' | sed -f - file2
sed = file1 generate line numbers
sed -r 'N;s/(.*)\n(.*)/\1s|\&$|\2|/' combine line number with data line and produce a sed substitution command using the line number as an address.
sed -f - file2 feed the above commands into a sed invocation using the -f switch and the standard input -

comparing 2 files and extracting elements from file

I have two files. one has list of names (only one column) and the second file is with three columns with names, phone number, country.
What I want is to extract the data of the people whose names are not present in file 1, but only present in file2.
#!/bin/bash
for i in `cat file1 `
do
cat file2 | awk '{ if ($1 != "'$i'") {print $1 "\t" $2 "\t" $3 }}'>>NonResp
done
What I get is a weird result with more data than expected.
Kindly help.
You can do this with grep:
grep -v -F -f file1 file2
awk '{print $1}' file2 | comm -1 -3 file1 - | join file2 -
The files must already be sorted for this to work properly.
Explanation:
=> awk '{print $1}' file2 |
print only the first fileld of file2 and feed it to the next command (|)
=> comm -1 -3 file1 - |
compare file1 and the output of the last command (-) and suppress lines only in file1 (-1) as well as lines in both files (-3); that leaves lines in file2 only and feed this to the next command (|)
=> join file2 -
join the original file2 and the output from the last command (-) and write out the fields fo the matching lines (whitespace between fields is truncated, however)
Testcase:
cat <<EOF >file1
alan
bert
cindy
dave
fred
sunny
ted
EOF
cat <<EOF >file2
bert 01 AU
cindy 03 CZ
ginny 05 CN
ted 07 CH
zorro 09 AG
EOF
awk '{print $1}' file2 | comm -1 -3 file1 - | join file2 -
assuming the field delimiter as "," in file2
awk -F, 'FNR==NR{a[$1];next}!($1 in a)' file1 file2
if "," is not the delimiter ,then simply
awk 'FNR==NR{a[$1];next}!($1 in a)' file1 file2
would be sufficient.

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