Cannot delete table starting with underscores - hadoop

I have a table named "__refactorlog" created by importing all tables from a RDBMS source using Sqoop. Since this table does not contain business data I'm trying to delete it now using:
DROP TABLE __refactorlog;
However, I get the following error:
FAILED: ParseException line 1:11 mismatched input ''__refactorlog'' expecting Identifier near 'table' in table name
I've checked that I'm in the correct database, that the table shows up normally using "show tables;", qualifying it with the db name and even quoting the table name, but I always get the same error.
The table is located in HDFS under /user/hive/warehouse/databasename.db/__refactorlog and it contains a small part-m-00000 file. I've also been able to delete other non-business tables without any issues, but they all had alfanumeric names.
Any idea how to delete the table (esp. the metadata, the HDFS files I can delete manually if needed)?
BTW, I'm using Hive 0.10 bundled in CDH 4.7.

Related

data deleted from hdfs after using hive load command [duplicate]

When load data from HDFS to Hive, using
LOAD DATA INPATH 'hdfs_file' INTO TABLE tablename;
command, it looks like it is moving the hdfs_file to hive/warehouse dir.
Is it possible (How?) to copy it instead of moving it, in order, for the file, to be used by another process.
from your question I assume that you already have your data in hdfs.
So you don't need to LOAD DATA, which moves the files to the default hive location /user/hive/warehouse. You can simply define the table using the externalkeyword, which leaves the files in place, but creates the table definition in the hive metastore. See here:
Create Table DDL
eg.:
create external table table_name (
id int,
myfields string
)
location '/my/location/in/hdfs';
Please note that the format you use might differ from the default (as mentioned by JigneshRawal in the comments). You can use your own delimiter, for example when using Sqoop:
row format delimited fields terminated by ','
I found that, when you use EXTERNAL TABLE and LOCATION together, Hive creates table and initially no data will present (assuming your data location is different from the Hive 'LOCATION').
When you use 'LOAD DATA INPATH' command, the data get MOVED (instead of copy) from data location to location that you specified while creating Hive table.
If location is not given when you create Hive table, it uses internal Hive warehouse location and data will get moved from your source data location to internal Hive data warehouse location (i.e. /user/hive/warehouse/).
An alternative to 'LOAD DATA' is available in which the data will not be moved from your existing source location to hive data warehouse location.
You can use ALTER TABLE command with 'LOCATION' option. Here is below required command
ALTER TABLE table_name ADD PARTITION (date_col='2017-02-07') LOCATION 'hdfs/path/to/location/'
The only condition here is, the location should be a directory instead of file.
Hope this will solve the problem.

Unable to partition hive table backed by HDFS

Maybe this is an easy question but, I am having a difficult time resolving the issue. At this time, I have an pseudo-distributed HDFS that contains recordings that are encoded using protobuf 3.0.0. Then, using Elephant-Bird/Hive I am able to put that data into Hive tables to query. The problem that I am having is partitioning the data.
This is the table create statement that I am using
CREATE EXTERNAL TABLE IF NOT EXISTS test_messages
PARTITIONED BY (dt string)
ROW FORMAT SERDE
"com.twitter.elephantbird.hive.serde.ProtobufDeserializer"
WITH serdeproperties (
"serialization.class"="path.to.my.java.class.ProtoClass")
STORED AS SEQUENCEFILE;
The table is created and I do not receive any runtime errors when I query the table.
When I attempt to load data as follows:
ALTER TABLE test_messages_20180116_20180116 ADD PARTITION (dt = '20171117') LOCATION '/test/20171117'
I receive an "OK" statement. However, when I query the table:
select * from test_messages limit 1;
I receive the following error:
Failed with exception java.io.IOException:java.lang.IllegalArgumentException: FieldDescriptor does not match message type.
I have been reading up on Hive table and have seen that the partition columns do not need to be part of the data being loaded. The reason I am trying to partition the date is both for performance but, more so, because the "LOAD DATA ... " statements move the files between directories in HDFS.
P.S. I have proven that I am able to run queries against hive table without partitioning.
Any thoughts ?
I see that you have created EXTERNAL TABLE. So you cannot add or drop partition using hive. you need to create a folder using hdfs or MR or SPARK. EXTERNAL table can only be read by hive but not managed by HDFS. You can check the hdfs location '/test/dt=20171117' and you will see that folder has not been created.
My suggestion is create the folder(partition) using "hadoop fs -mkdir '/test/20171117'" then try to query the table. although it will give 0 row. but you can add the data to that folder and read from Hive.
You need to specify a LOCATION for an EXTERNAL TABLE
CREATE EXTERNAL TABLE
...
LOCATION '/test';
Then, is the data actually a sequence file? All you've said is that it's protobuf data. I'm not sure how the elephantbird library works, but you'll want to double check that.
Then, your table locations need to look like /test/dt=value in order for Hive to read them.
After you create an external table over HDFS location, you must run MSCK REPAIR TABLE table_name for the partitions to be added to the Hive metastore

Can Hive table automatically update when underlying directory is changed

If I build a Hive table on top of some S3 (or HDFS) directory like so:
create external table newtable (name string)
row format delimited
fields terminated by ','
stored as textfile location 's3a://location/subdir/';
When I add files to that S3 location, the Hive table doesn't automatically update. The new data is only included if I create a new Hive table on that location. Is there a way to build a Hive table (maybe using partitions) so that whenever new files are added to the underlying directory, the Hive table automatically shows that data (without having to recreate the Hive table)?
On HDFS each file scanned each time table being queried as #Dudu Markovitz pointed. And files in HDFS are immediately consistent.
Update: S3 is also strongly consistent now, so removed part about eventual consistency.
Also there may be a problem with using statistics when querying table after adding files, see here: https://stackoverflow.com/a/39914232/2700344
Everything #leftjoin says is correct, with one extra detail: s3 doesn't offer immediate consistency on listings. A new blob can be uploaded, HEAD/GET will return it but a list operation on the parent path may not see it. This means that Hive code which lists the directory may not see the data. Using unique names doesn't fix this, only using a consistent DB like Dynamo which is updated as files are added/removed. Even there, you have added a new thing to keep in sync...

Hive error - Select * from table ;

I created one external table in hive which was successfully created.
create external table load_tweets(id BIGINT,text STRING)
ROW FORMAT SERDE 'org.apache.hive.hcatalog.data.JsonSerDe'
LOCATION '/user/cloudera/data/tweets_raw';
But, when I did:
hive> select * from load_tweets;
I got the below error:
Failed with exception java.io.IOException:org.apache.hadoop.hive.serde2.SerDeException: org.codehaus.jackson.JsonParseException: Unexpected character ('O' (code 79)): expected a valid value (number, String, array, object, 'true', 'false' or 'null')
at [Source: java.io.ByteArrayInputStream#5dfb0646; line: 1, column: 2]**
Please suggest me how to fix this. Is it the twitter o/p file which was created using flume was corrupted or anything else?
You'll need to do two additional things.
1) Put data into the file (perhaps using INSERT). Or maybe it's already there. In either case, you'll then need to
2) from Hive, msck repair table load_tweets;
For Hive tables, the schema and other meta-information about the data is stored in what's called the Hive Metastore -- it's actually a relational database under the covers. When you perform operations on Hive tables created without the LOCATION keyword (that is, internal, not external tables), the Hive will automatically update the metastore.
But most Hive use-cases cause data to be appended to files that are updated using other processes, and thus external tables are common. If new partitions are created externally, before you can query them with Hive you need to force the metastore to sync with the current state of the data using msck repair table <tablename>;.

Where is HIVE metadata stored by default?

I have created an external table in Hive using following:
create external table hpd_txt(
WbanNum INT,
YearMonthDay INT ,
Time INT,
HourlyPrecip INT)
ROW FORMAT DELIMITED
FIELDS TERMINATED BY ','
LINES TERMINATED BY '\n'
stored as textfile
location 'hdfs://localhost:9000/user/hive/external';
Now this table is created in location */hive/external.
Step-1: I loaded data in this table using:
load data inpath '/input/hpd.txt' into table hpd_txt;
the data is successfully loaded in the specified path ( */external/hpd_txt)
Step-2: I delete the table from */hive/external path using following:
hadoop fs -rmr /user/hive/external/hpd_txt
Questions:
why is the table deleted from original path? (*/input/hpd.txt is deleted from hdfs but table is created in */external path)
After I delete the table from HDFS as in step 2, and again I use show tables; It still gives the table hpd_txt in the external path.
so where is this coming from.
Thanks in advance.
Hive doesn't know that you deleted the files. Hive still expects to find the files in the location you specified. You can do whatever you want in HDFS and this doesn't get communicated to hive. You have to tell hive if things change.
hadoop fs -rmr /user/hive/external/hpd_txt
For instance the above command doesn't delete the table it just removes the file. The table still exists in hive metastore. If you want to delete the table then use:
drop if exists tablename;
Since you created the table as an external table this will drop the table from hive. The files will remain if you haven't removed them. If you want to delete an external table and the files the table is reading from you can do one of the following:
Drop the table and then remove the files
Change the table to managed and drop the table
Finally the location of the metastore for hive is by default located here /usr/hive/warehouse.
The EXTERNAL keyword lets you create a table and provide a LOCATION so that Hive does not use a default location for this table. This comes is handy if you already have data generated. Else, you will have data loaded (conventionally or by creating a file in the directory being pointed by the hive table)
When dropping an EXTERNAL table, data in the table is NOT deleted from the file system.
An EXTERNAL table points to any HDFS location for its storage, rather than being stored in a folder specified by the configuration property hive.metastore.warehouse.dir.
Source: Hive docs
So, in your step 2, removing the file /user/hive/external/hpd_txt removes the data source(data pointing to the table) but the table still exists and would continue to point to hdfs://localhost:9000/user/hive/external as it was created
#Anoop : Not sure if this answers your question. let me know if you have any questions further.
Do not use load path command. The Load operation is used to MOVE ( not COPY) the data into corresponding Hive table. Use put Or copyFromLocal to copy file from non HDFS format to HDFS format. Just provide HDFS file location in create table after execution of put command.
Deleting a table does not remove HDFS file from disk. That is the advantage of external table. Hive tables just stores metadata to access data files. Hive tables store actual data of data file in HIVE tables. If you drop the table, the data file is untouched in HDFS file location. But in case of internal tables, both metadata and data will be removed if you drop table.
After going through you helping comments and other posts, I have found answer to my question.
If I use LOAD INPATH command then it "moves" the source file to the location where external table is being created. Which although, wont be affected in case of dropping the table, but changing the location is not good. So use local inpath in case of loading data in Internal tables .
To load data in external tables from a file located in the HDFS, use the location in the CREATE table query which will point to the source file, for example:
create external table hpd(WbanNum string,
YearMonthDay string ,
Time string,
hourprecip string)
ROW FORMAT DELIMITED
FIELDS TERMINATED BY ','
LINES TERMINATED BY '\n'
stored as textfile
location 'hdfs://localhost:9000/input/hpd/';
So this sample location will point to the data already present in HDFS in this path. so no need to use LOAD INPATH command here.
Its a good practice to store a source files in their private dedicated directories. So that there is no ambiguity while external tables are created as data is in a properly managed directory system.
Thanks a lot for helping me understand this concept guys! Cheers!

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