Unable to partition hive table backed by HDFS - hadoop

Maybe this is an easy question but, I am having a difficult time resolving the issue. At this time, I have an pseudo-distributed HDFS that contains recordings that are encoded using protobuf 3.0.0. Then, using Elephant-Bird/Hive I am able to put that data into Hive tables to query. The problem that I am having is partitioning the data.
This is the table create statement that I am using
CREATE EXTERNAL TABLE IF NOT EXISTS test_messages
PARTITIONED BY (dt string)
ROW FORMAT SERDE
"com.twitter.elephantbird.hive.serde.ProtobufDeserializer"
WITH serdeproperties (
"serialization.class"="path.to.my.java.class.ProtoClass")
STORED AS SEQUENCEFILE;
The table is created and I do not receive any runtime errors when I query the table.
When I attempt to load data as follows:
ALTER TABLE test_messages_20180116_20180116 ADD PARTITION (dt = '20171117') LOCATION '/test/20171117'
I receive an "OK" statement. However, when I query the table:
select * from test_messages limit 1;
I receive the following error:
Failed with exception java.io.IOException:java.lang.IllegalArgumentException: FieldDescriptor does not match message type.
I have been reading up on Hive table and have seen that the partition columns do not need to be part of the data being loaded. The reason I am trying to partition the date is both for performance but, more so, because the "LOAD DATA ... " statements move the files between directories in HDFS.
P.S. I have proven that I am able to run queries against hive table without partitioning.
Any thoughts ?

I see that you have created EXTERNAL TABLE. So you cannot add or drop partition using hive. you need to create a folder using hdfs or MR or SPARK. EXTERNAL table can only be read by hive but not managed by HDFS. You can check the hdfs location '/test/dt=20171117' and you will see that folder has not been created.
My suggestion is create the folder(partition) using "hadoop fs -mkdir '/test/20171117'" then try to query the table. although it will give 0 row. but you can add the data to that folder and read from Hive.

You need to specify a LOCATION for an EXTERNAL TABLE
CREATE EXTERNAL TABLE
...
LOCATION '/test';
Then, is the data actually a sequence file? All you've said is that it's protobuf data. I'm not sure how the elephantbird library works, but you'll want to double check that.
Then, your table locations need to look like /test/dt=value in order for Hive to read them.
After you create an external table over HDFS location, you must run MSCK REPAIR TABLE table_name for the partitions to be added to the Hive metastore

Related

data deleted from hdfs after using hive load command [duplicate]

When load data from HDFS to Hive, using
LOAD DATA INPATH 'hdfs_file' INTO TABLE tablename;
command, it looks like it is moving the hdfs_file to hive/warehouse dir.
Is it possible (How?) to copy it instead of moving it, in order, for the file, to be used by another process.
from your question I assume that you already have your data in hdfs.
So you don't need to LOAD DATA, which moves the files to the default hive location /user/hive/warehouse. You can simply define the table using the externalkeyword, which leaves the files in place, but creates the table definition in the hive metastore. See here:
Create Table DDL
eg.:
create external table table_name (
id int,
myfields string
)
location '/my/location/in/hdfs';
Please note that the format you use might differ from the default (as mentioned by JigneshRawal in the comments). You can use your own delimiter, for example when using Sqoop:
row format delimited fields terminated by ','
I found that, when you use EXTERNAL TABLE and LOCATION together, Hive creates table and initially no data will present (assuming your data location is different from the Hive 'LOCATION').
When you use 'LOAD DATA INPATH' command, the data get MOVED (instead of copy) from data location to location that you specified while creating Hive table.
If location is not given when you create Hive table, it uses internal Hive warehouse location and data will get moved from your source data location to internal Hive data warehouse location (i.e. /user/hive/warehouse/).
An alternative to 'LOAD DATA' is available in which the data will not be moved from your existing source location to hive data warehouse location.
You can use ALTER TABLE command with 'LOCATION' option. Here is below required command
ALTER TABLE table_name ADD PARTITION (date_col='2017-02-07') LOCATION 'hdfs/path/to/location/'
The only condition here is, the location should be a directory instead of file.
Hope this will solve the problem.

Where is HIVE metadata stored by default?

I have created an external table in Hive using following:
create external table hpd_txt(
WbanNum INT,
YearMonthDay INT ,
Time INT,
HourlyPrecip INT)
ROW FORMAT DELIMITED
FIELDS TERMINATED BY ','
LINES TERMINATED BY '\n'
stored as textfile
location 'hdfs://localhost:9000/user/hive/external';
Now this table is created in location */hive/external.
Step-1: I loaded data in this table using:
load data inpath '/input/hpd.txt' into table hpd_txt;
the data is successfully loaded in the specified path ( */external/hpd_txt)
Step-2: I delete the table from */hive/external path using following:
hadoop fs -rmr /user/hive/external/hpd_txt
Questions:
why is the table deleted from original path? (*/input/hpd.txt is deleted from hdfs but table is created in */external path)
After I delete the table from HDFS as in step 2, and again I use show tables; It still gives the table hpd_txt in the external path.
so where is this coming from.
Thanks in advance.
Hive doesn't know that you deleted the files. Hive still expects to find the files in the location you specified. You can do whatever you want in HDFS and this doesn't get communicated to hive. You have to tell hive if things change.
hadoop fs -rmr /user/hive/external/hpd_txt
For instance the above command doesn't delete the table it just removes the file. The table still exists in hive metastore. If you want to delete the table then use:
drop if exists tablename;
Since you created the table as an external table this will drop the table from hive. The files will remain if you haven't removed them. If you want to delete an external table and the files the table is reading from you can do one of the following:
Drop the table and then remove the files
Change the table to managed and drop the table
Finally the location of the metastore for hive is by default located here /usr/hive/warehouse.
The EXTERNAL keyword lets you create a table and provide a LOCATION so that Hive does not use a default location for this table. This comes is handy if you already have data generated. Else, you will have data loaded (conventionally or by creating a file in the directory being pointed by the hive table)
When dropping an EXTERNAL table, data in the table is NOT deleted from the file system.
An EXTERNAL table points to any HDFS location for its storage, rather than being stored in a folder specified by the configuration property hive.metastore.warehouse.dir.
Source: Hive docs
So, in your step 2, removing the file /user/hive/external/hpd_txt removes the data source(data pointing to the table) but the table still exists and would continue to point to hdfs://localhost:9000/user/hive/external as it was created
#Anoop : Not sure if this answers your question. let me know if you have any questions further.
Do not use load path command. The Load operation is used to MOVE ( not COPY) the data into corresponding Hive table. Use put Or copyFromLocal to copy file from non HDFS format to HDFS format. Just provide HDFS file location in create table after execution of put command.
Deleting a table does not remove HDFS file from disk. That is the advantage of external table. Hive tables just stores metadata to access data files. Hive tables store actual data of data file in HIVE tables. If you drop the table, the data file is untouched in HDFS file location. But in case of internal tables, both metadata and data will be removed if you drop table.
After going through you helping comments and other posts, I have found answer to my question.
If I use LOAD INPATH command then it "moves" the source file to the location where external table is being created. Which although, wont be affected in case of dropping the table, but changing the location is not good. So use local inpath in case of loading data in Internal tables .
To load data in external tables from a file located in the HDFS, use the location in the CREATE table query which will point to the source file, for example:
create external table hpd(WbanNum string,
YearMonthDay string ,
Time string,
hourprecip string)
ROW FORMAT DELIMITED
FIELDS TERMINATED BY ','
LINES TERMINATED BY '\n'
stored as textfile
location 'hdfs://localhost:9000/input/hpd/';
So this sample location will point to the data already present in HDFS in this path. so no need to use LOAD INPATH command here.
Its a good practice to store a source files in their private dedicated directories. So that there is no ambiguity while external tables are created as data is in a properly managed directory system.
Thanks a lot for helping me understand this concept guys! Cheers!

Data in HDFS files not seen under hive table

I have to create a hive table from data present in oracle tables.
I'm doing a sqoop, thereby converting the oracle data into HDFS files. Then I'm creating a hive table on the HDFS files.
The sqoop completes successfully and the files also get generated in the HDFS target directory.
Then I run the create table script in hive. The tables gets created. But it is an empty table, no data is seen in the hive table.
Has anyone faced a similar problem?
Hive default delimiter is ctrlA, if you don't specify any delimiter it will take default delimiter. Add below line in your hive script .
row format delimited fields terminated by '\t'
Your Hive script and your expectation is wrong. You are trying to create a partitioned table on the data that you have already imported, partitions won't work that way. If your query has no partition in it then you can able to see data.
Basically If you want partitioned table , you can't create on the under lying data like you have tried above. If you want hive partition load the data from intermediate table or that sqoop directory to your partitioned table to get Hive partitions.

Why hive doesn't allow create external table with CTAS?

In hive, create external table by CTAS is a semantic error, why?
The table created by CTAS is atomic, while external table means data will not be deleted when dropping table, they do not seem to conflict.
In Hive when we create a table(NOT external) the data will be stored in /user/hive/warehouse.
But during External hive table creation the file will be anywhere else, we are just pointing to that hdfs directory and exposing the data as hive table to run hive queries etc.
This SO answer more precisely Create hive table using "as select" or "like" and also specify delimiter
Am I missing something here?
Try this...You should be able to create an external table with CTAS.
CREATE TABLE ext_table LOCATION '/user/XXXXX/XXXXXX'
AS SELECT * from managed_table;
I was able to create one. I am using 0.12.
i think its a semantic error because it misses the most imp parameter of external table definition viz. the External Location of the data file! by definition, 1. External means the data is outside hive control residing outside the hive data warehouse dir. 2. if table is dropped data remains intact only table definition is removed from hive metastore. so,
i. if CTAS is with managed table, the new ext table will have file in warehouse which will be removed with drop table making #2 wrong
ii. if CTAS is with other external table, the 2 tables will point to same file location.
CTAS creates a managed hive table with the new name using the schema and data of the said table.
You can convert it to an external table using:
ALTER TABLE <TABLE_NAME> SET TBLPROPERTIES('EXTERNAL'='TRUE');

how to load data in hive automatically

recently I want to load the log files into hive tables, I want a tool which can read data from a certain directory and load them into hive automatically. This directory may include lots of subdirectories, for example, the certain directory is '/log' and the subdirectories are '/log/20130115','/log/20130116','/log/201301017'. Is there some ETL tools which can achieve the function that:once the new data is stored in the certain directory, the tool can detect this data automatically and load them into hive table. Is there such tools, do I have to write script by myself?
You can easily do this using Hive external tables and partitioning your table by day. For example, create your table as such:
create external table mytable(...)
partitioned by (day string)
location '/user/hive/warehouse/mytable';
This will essentially create an empty table in the metastore and make it point to /user/hive/warehouse/mytable.
Then you can load your data in this directory with the format key=value where key is your partition name (here "day") and value is the value of your partition. For example:
hadoop fs -put /log/20130115 /user/hive/warehouse/mytable/day=20130115
Once your data is loaded there, it is in the HDFS directory, but the Hive metastore doesn't know yet that it belongs to the table, so you can add it this way:
alter table mytable add partition(day='20130115');
And you should be good to go, the metastore will be updated with your new partition, and you can now query your table on this partition.
This should be trivial to script, you can create a cron job running once a day that will do these command in order and find the partition to load with the date command, for example continuously doing this command:
hadoop fs -test /log/`date +%Y%m%d`
and checking if $? is equal to 0 will tell you if the file is here and if it is, you can transfer it and add the partition as described above.
You can make use of LOAD DATA command provided by Hive. It exactly matches your use case. Specify a directory in your local file system and make Hive tables from it.
Example usage -
LOAD DATA LOCAL INPATH '/home/user/some-directory'
OVERWRITE INTO TABLE table

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