Storing arrays of integers in database - performance

I am creating a database that will store 100.000 (and probably more in the future) users. While this obviously happens in a table with 1 row per user, every user can (and will) store hundreds of items. In programming language this would mean the user has 2 arrays (or one 2-dimensional array) of integers: a column for the itemid's and a column for the amounts.
My instincts tell me to create a table to hold all these items, with rows like (userid, itemid, amount). However this would result in a huge table. 200.000 users with 250 items each... that's 50 million entries in one table. This, plus the fact that the table will undergo continuous and rapid change, frightens me. (How rapid? I estimate up to 100 modifications per second.)
Typically there will be anywhere between 100 and 2000 users, all adding and removing items, and modifying amounts. These actions can and will happen in programming code. It would go as follows:
User starts session, program loads all the users items from the database
User modifies the item list
Every few minutes, the changes are saved into the database
When the user ends the session, it is also saved into the database
It is worth noting that there is a maximum to the number of items a user can store.
Are there any alternatives to using a separate table? Perhaps save the values in a formatted text string? Or is this one of the instances where using a MySQL database is actually a Bad Idea™?
Thank you for your time and insights.

My instincts tell me to create a table to hold all these items
Your instincts are right.
1) avoid premature optimisation
2) don't break the rules of normalization unless you've got a very good and real reason to do so
3) why do you suspect that the multi-table approach will be faster?
that's 50 million entries in one table
So what? Even if you only have an index on userid, the difference in performance compared with a single table per user will not be noticeably slower (in practice, with 200,000 users, it will be much, much faster - since the DBMS can comfortably keep an open file handle for each table!).
I estimate up to 100 modifications per second
Should be possible using MySQL and fairly basic hardware, but if it were me, and I wanted a bit of headroom, I'd go with a pair of mirrored SATA disks, tables on one mirror, indexes on the other.
The only issue I'd be concerned about (which applies regardless of which of the 2 models you choose) is supporting 2000 concurrent connections. Do the connections have to be concurrent? Or can each user download a working set (optionally using an optimistic locking strategy) and close off the connection, then push back the changes on a new connection? If not, then you'll probably want a good whack of memory and CPU.
But leaving aside whether to use one big table or lots of little ones, if this is the only use for the data, and access is not concurrent to particular data items, then why bother with a relational database at all? NoSQL or a shared filesystem might work just as well.

Putting data into one field as a array is alwmost always a mistake. It makes querying the data much harder and much more timeconsuming as well as much less likely to use indexes. It is ok, if the values were just text where you would never need to find one or more elements fo the array but it is my experience that this situation is rarely encountered. Modern databases can handle 50 million records without even breaking a sweat. That's a small table in daatbase terms.

It should be OK to do it as you described using two tables. The database should be able to handle millions of records.
The important points to look at:
1- Optimize your queries as much as possible.
2- Create the appropriate index(es) to speed up your queries.
3- Use InnoDB if you have concurrent read/update operations as it supports row-level locking as opposed to MyISAM.
4- Provide good hardware to support the database server.
5- Run the database server on a dedicated server if affordable.

Related

What is the actual use of partitions in clickhouse?

It says partitions make it easier to drop or move data so that there is hit only on limited data. In various blogs it is suggested to use month as a partitioning key (toYYYYMM(date)). In many places it is also suggested to not have more than a couple of partitions. I am using clickhouse as a database to store time series data which do not undergo frequent deletions. What would be the advisable partitioning key for timeseries data of high volume? Does there have to be one if I do not want to perform deletes frequently?
In production I noticed that startup was very slow and I was suspecting that having too many partitions is the culprit. So I decided to test it out by inserting time-series data fresh into a table (which created >2300 partitions for ~20Bil rows) by selecting data from another table (so that it doesn't have an opportunity to optimize the table). Immediately I dropped the original table and tried a restart. It finished fast in about 10s. This is in complete opposite to what I observed in production with 800GB+ of data (with many databases and tables as opposed to my test node which had only one table).
Edit: As it was pointed out, I mixed up parts and partitions. Regarding startup time of clickhouse being affected, I'd better post another question.
This is a pretty common question, and for disclosure, I work at ClickHouse.
Partitions are particularly useful when you have timeseries data, as you noted. When determining the number of partitions, we often recommend a few guidelines:
The use of partitioning should be determined by a couple of questions as to why you're using them:
are you generally going to query only a single partition? For example, if your queries are often for results within a one day or one month period, it could make sense to partition at that period duration
are you wanting to "tier" or set a TTL on your data such that once the partition reaches an age of X (e.g., 91 days old, 7 months old), you want to do something special with it? (e.g., TTL to lower cost tier storage, backup and delete from ClickHouse, etc.)
We often recommend to keep the number of partitions less than around 100. Up to 1000 partitions can work, but it is suboptimal and will have some performance impact at the filesystem and index/memory sizes, which can impact startup time insert/query time
Given these guidelines, hoping that helps with your question. It is probably most common to partition at the day or month, but since ClickHouse can manage large tables quite easily, might want to move towards fewer partitions if possible - partitioning by month probably most common.
I didn't fully understand your test results so please feel free to expand. 2300 partitions sounds like too many but might work, just with some performance implications. Reducing your number of partitions (and therefore increasing the partition size) seems like a good recommendation.

SQL Server - Merging large tables without locking the data

I have a very large set of data (~3 million records) which needs to be merged with updates and new records on a daily schedule. I have a stored procedure that actually breaks up the record set into 1000 record chunks and uses the MERGE command with temp tables in an attempt to avoid locking the live table while the data is updating. The problem is that it doesn't exactly help. The table still "locks up" and our website that uses the data receives timeouts when attempting to access the data. I even tried splitting it up into 100 record chunks and even tried a WAITFOR DELAY '000:00:5' to see if it would help to pause between merging the chunks. It's still rather sluggish.
I'm looking for any suggestions, best practices, or examples on how to merge large sets of data without locking the tables.
Thanks
Change your front end to use NOLOCK or READ UNCOMMITTED when doing the selects.
You can't NOLOCK MERGE,INSERT, or UPDATE as the records must be locked in order to perform the update. However, you can NOLOCK the SELECTS.
Note that you should use this with caution. If dirty reads are okay, then go ahead. However, if the reads require the updated data then you need to go down a different path and figure out exactly why merging 3M records is causing an issue.
I'd be willing to bet that most of the time is spent reading data from the disk during the merge command and/or working around low memory situations. You might be better off simply stuffing more ram into your database server.
An ideal amount would be to have enough ram to pull the whole database into memory as needed. For example, if you have a 4GB database, then make sure you have 8GB of RAM.. in an x64 server of course.
I'm afraid that I've quite the opposite experience. We were performing updates and insertions where the source table had only a fraction of the number of rows as the target table, which was in the millions.
When we combined the source table records across the entire operational window and then performed the MERGE just once, we saw a 500% increase in performance. My explanation for this is that you are paying for the up front analysis of the MERGE command just once instead of over and over again in a tight loop.
Furthermore, I am certain that merging 1.6 million rows (source) into 7 million rows (target), as opposed to 400 rows into 7 million rows over 4000 distinct operations (in our case) leverages the capabilities of the SQL server engine much better. Again, a fair amount of the work is in the analysis of the two data sets and this is done only once.
Another question I have to ask is well is whether you are aware that the MERGE command performs much better with indexes on both the source and target tables? I would like to refer you to the following link:
http://msdn.microsoft.com/en-us/library/cc879317(v=SQL.100).aspx
From personal experience, the main problem with MERGE is that since it does page lock it precludes any concurrency in your INSERTs directed to a table. So if you go down this road it is fundamental that you batch all updates that will hit a table in a single writer.
For example: we had a table on which INSERT took a crazy 0.2 seconds per entry, most of this time seemingly being wasted on transaction latching, so we switched this over to using MERGE and some quick tests showed that it allowed us to insert 256 entries in 0.4 seconds or even 512 in 0.5 seconds, we tested this with load generators and all seemed to be fine, until it hit production and everything blocked to hell on the page locks, resulting in a much lower total throughput than with the individual INSERTs.
The solution was to not only batch the entries from a single producer in a MERGE operation, but also to batch the batch from producers going to individual DB in a single MERGE operation through an additional level of queue (previously also a single connection per DB, but using MARS to interleave all the producers call to the stored procedure doing the actual MERGE transaction), this way we were then able to handle many thousands of INSERTs per second without problem.
Having the NOLOCK hints on all of your front-end reads is an absolute must, always.

Oracle select query performance

I am working on a application. It is in its initial stage so the number of records in table is not large, but later on it will have around 1 million records in the same table.
I want to know what points I should consider while writing select query which will fetch a huge amount of data from table so it does not slow down performance.
First rule:
Don't fetch huge amounts of data back to the application.
Unless you are going to display every single one of the items in the huge amount of data, do not fetch it. Communication between the DBMS and the application is (relatively) slow, so avoid it when possible. It isn't so slow that you shouldn't use the DBMS or anything like that, but if you can reduce the amount of data flowing between DBMS and application, the overall performance will usually improve.
Often, one easy way to do this is to list only those columns you actually need in the application, rather than using 'SELECT *' to retrieve all columns when you'll only use 4 of the 24 that exist.
Second rule:
Try to ensure that the DBMS does not have to look at huge amounts of data.
To the extent possible, minimize the work that the DBMS has to do. It is busy, and typically it is busy on behalf of many people at any given time. If you can reduce the amount of work that the DBMS has to do to process your query, everyone will be happier.
Consider things like ensuring you have appropriate indexes on the table - not too few, not too many. Designed judiciously, indexes can greatly improve the performance of many queries. Always remember, though, that each index has to be maintained, so inserts, deletes and updates are slower when there are more indexes to manage on a given table.
(I should mention: none of this advice is specific to Oracle - you can apply it to any DBMS.)
To get good performance with a database there is a lot of things you need to have in mind. At first, it is the design, and here you should primary think about normalization and denormalization (split up tables but still not as much as performance heavy joins are required).
There are often a big bunch of tuning when it comes to performance. However, 80% of the performance is determined from the SQL-code. Below are some links that might help you.
http://www.smart-soft.co.uk/Oracle/oracle-performance-tuning-part7.htm
http://www.orafaq.com/wiki/Oracle_database_Performance_Tuning_FAQ
A few points to remember:
Fetch only the columns you need to use on the client side.
Ensure you set up the correct indexes that are going to help you find records. These can be done later, but it is better to plan for them if you can.
Ensure you have properly accounted for column widths and data sizes. Don't use an INT when a TINYINT will hold all possible values. A row with 100 TINYINT fields will fetch faster than a row with 100 INT fields, and you'll also be able to fetch more rows per read.
Depending on how clean you need the data to be, it may be permissable to do a "dirty read", where the database fetches data while an update is in progress. This can speed things up significantly in some cases, though it means the data you get might not be the absolute latest.
Give your DBA beer. And hugs.
Jason

DB Index speed vs caching

We have about 10K rows in a table. We want to have a form where we have a select drop down that contains distinct values of a given column in this table. We have an index on the column in question.
To increase performance I created a little cache table that contains the distinct values so we didn't need to do a select distinct field from table against 10K rows. Surprisingly it seems doing select * from cachetable (10 rows) is no faster than doing the select distinct against 10K rows. Why is this? Is the index doing all the work? At what number of rows in our main table will there be a performance improvement by querying the cache table?
For a DB, 10K rows is nothing. You're not seeing much difference because the actual calculation time is minimal, with most of it consumed by other, constant, overhead.
It's difficult to predict when you'd start noticing a difference, but it would probably be at around a million rows.
If you've already set up caching and it's not detrimental, you may as well leave it in.
10k rows is not much... start caring when you reach 500k ~ 1 million rows.
Indexes do a great job, specially if you just have 10 different values for that index.
This depends on numerous factors - the amount of memory your DB has, the size of the rows in the table, use of a parameterised query and so forth, but generally 10K is not a lot of rows and particularly if the table is well indexed then it's not going to cause any modern RDBMS any sweat at all.
As a rule of thumb I would generally only start paying close attention to performance issues on a table when it passes the 100K rows mark, and 500K doesn't usually cause much of a problem if indexed correctly and accessed by such. Performance usually tends to fall off catastrophically on large tables - you may be fine on 500K rows but crawling on 600K - but you have a long way to go before you are at all likely to hit such problems.
Is the index doing all the work?
You can tell how the query is being executed by viewing the execution plan.
For example, try this:
explain plan for select distinct field from table;
select * from table(dbms_xplan.display);
I notice that you didn't include an ORDER BY on that. If you do not include ORDER BY then the order of the result set may be random, particularly if oracle uses the HASH algorithm for making a distinct list. You ought to check that.
So I'd look at the execution plans for the original query that you think is using an index, and at the one based on the cache table. Maybe post them and we can comment on what's really going on.
Incidentaly, the cache table would usually be implemented as a materialised view, particularly if the master table is generally pretty static.
Serious premature optimization. Just let the database do its job, maybe with some tweaking to the configuration (especially if it's MySQL, which has several cache types and settings).
Your query in 10K rows most probably uses HASH SORT UNIQUE.
As 10K most probably fit into db_buffers and hash_area_size, all operations are performed in memory, and you won't note any difference.
But if the query will be used as a part of a more complex query, or will be swapped out by other data, you may need disk I/O to access the data, which will slow your query down.
Run your query in a loop in several sessions (as many sessions as there will be users connected), and see how it performs in that case.
For future plans and for scalability, you may want to look into an indexing service that uses pure memory or something faster than the TCP DB round-trip. A lot of people (including myself) use Lucene to achieve this by normalizing the data into flat files.
Lucene has a built-in Ram Drive directory indexer, which can build the index all in memory - removing the dependency on the file system, and greatly increasing speed.
Lately, I've architected systems that have a single Ram drive index wrapped by a Webservice. Then, I have my Ajax-like dropdowns query into that Webservice for high availability and high speed - no db layer, no file system, just pure memory and if remote tcp packet speed.
If you have an index on the column, then all the values are in the index and the dbms never has to look in the table. It just looks in the index which just has 10 entries. If this is mostly read only data, then cache it in memory. Caching helps scalability and a lot by relieving the database of work. A query that is quick on a database with no users, might perform poorly if a 30 queries are going on at the same time.

Database speed optimization: few tables with many rows, or many tables with few rows?

I have a big doubt.
Let's take as example a database for a whatever company's orders.
Let's say that this company make around 2000 orders per month, so, around 24K order per year, and they don't want to delete any orders, even if it's 5 years old (hey, this is an example, numbers don't mean anything).
In the meaning of have a good database query speed, its better have just one table, or will be faster having a table for every year?
My idea was to create a new table for the orders each year, calling such orders_2008, orders_2009, etc..
Can be a good idea to speed up db queries?
Usually the data that are used are those of the current year, so there are less lines the better is..
Obviously, this would give problems when I search in all the tables of the orders simultaneously, because should I will to run some complex UNION .. but this happens in the normal activities very rare.
I think is better to have an application that for 95% of the query is fast and the remaining somewhat slow, rather than an application that is always slow.
My actual database is on 130 tables, the new version of my application should have about 200-220 tables.. of which about 40% will be replicated annually.
Any suggestion?
EDIT: the RDBMS will be probably Postgresql, maybe (hope not) Mysql
Smaller tables are faster. Period.
If you have history that is rarely used, then getting the history into other tables will be faster.
This is what a data warehouse is about -- separate operational data from historical data.
You can run a periodic extract from operational and a load to historical. All the data is kept, it's just segregated.
Before you worry about query speed, consider the costs.
If you split the code into separate code, you will have to have code that handles it. Every bit of code you write has the chance to be wrong. You are asking for your code to be buggy at the expense of some unmeasured and imagined performance win.
Also consider the cost of machine time vs. programmer time.
If you use indexes properly, you probably need not split it into multiple tables. Most modern DBs will optimize access.
Another option you might consider is to have a table for the current year, and at the end append the data to another table which has data for all the previous years. ?
I would not split tables by year.
Instead I would archive data to a reporting database every year, and use that when needed.
Alternatively you could partition the data, amongst drives, thus maintaining performance, although i'm unsure if this is possible in postgresql.
For the volume of data you're looking at splitting the data seems like a lot of trouble for little gain. Postgres can do partitioning, but the fine manual [1] says that as a rule of thumb you should probably only consider it for tables that exceed the physical memory of the server. In my experience, that's at least a million rows.
http://www.postgresql.org/docs/current/static/ddl-partitioning.html
I agree that smaller tables are faster. But it depends on your business logic if it makes sense to split a single entity over multiple tables. If you need a lot of code to manage all the tables than it might not be a good idea.
It also depends on the database what logic you're able to use to tackle this problem. In Oracle a table can be partitioned (on year for example). Data is stored physically in different table spaces which should make it faster to address (as I would assume that all data of a single year is stored together)
An index will speed things up but if the data is scattered across the disk than a load of block reads are required which can make it slow.
Look into partitioning your tables in time slices. Partitioning is good for the log-like table case where no foreign keys point to the tables.

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