Piping and redirecting with cat - bash

Looking over the Dokku source code, I noticed two uses of pipe and redirect that I am not familiar with.
One is: cat | command
Example: id=$(cat | docker run -i -a stdin progrium/buildstep /bin/bash -c "mkdir -p /app && tar -xC /app")
The other is cat > file
Example: id=$(cat "$HOME/$APP/ENV" | docker run -i -a stdin $IMAGE /bin/bash -c "mkdir -p /app/.profile.d && cat > /app/.profile.d/app-env.sh")
What is the use of pipe and redirect in the two cases?

Normally, both usages are completely useless.
cat without arguments reads from stdin, and writes to stdout.
cat | command is equivalent with command.
&& cat >file is equivalent with >file, assuming the previous command processed the stdin input.
Looking at it more closely, the sole purpose of that cat command in the second example is to read from stdin. Without it, you would redirect the output of mkdir to the file. So the command first makes sure the directory exists, then writes to the file whatever you feed to it through the stdin.

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I am trying to automate the addition of a repository source in my arch's pacman.conf file but using the echo command in my shell script. However, it fails like this:-
sudo echo "[archlinuxfr]" >> /etc/pacman.conf
sudo echo "Server = http://repo.archlinux.fr/\$arch" >> /etc/pacman.conf
sudo echo " " >> /etc/pacman.conf
-bash: /etc/pacman.conf: Permission denied
If I make changes to /etc/pacman.conf manually using vim, by doing
sudo vim /etc/pacman.conf
and quiting vim with :wq, everything works fine and my pacman.conf has been manually updated without "Permission denied" complaints.
Why is this so? And how do I get sudo echo to work? (btw, I tried using sudo cat too but that failed with Permission denied as well)
As #geekosaur explained, the shell does the redirection before running the command. When you type this:
sudo foo >/some/file
Your current shell process makes a copy of itself that first tries to open /some/file for writing, then if that succeeds it makes that file descriptor its standard output, and only if that succeeds does it execute sudo. This is failing at the first step.
If you're allowed (sudoer configs often preclude running shells), you can do something like this:
sudo bash -c 'foo >/some/file'
But I find a good solution in general is to use | sudo tee instead of > and | sudo tee -a instead of >>. That's especially useful if the redirection is the only reason I need sudo in the first place; after all, needlessly running processes as root is precisely what sudo was created to avoid. And running echo as root is just silly.
echo '[archlinuxfr]' | sudo tee -a /etc/pacman.conf >/dev/null
echo 'Server = http://repo.archlinux.fr/$arch' | sudo tee -a /etc/pacman.conf >/dev/null
echo ' ' | sudo tee -a /etc/pacman.conf >/dev/null
I added > /dev/null on the end because tee sends its output to both the named file and its own standard output, and I don't need to see it on my terminal. (The tee command acts like a "T" connector in a physical pipeline, which is where it gets its name.) And I switched to single quotes ('...') instead of doubles ("...") so that everything is literal and I didn't have to put a backslash in front of the $ in $arch. (Without the quotes or backslash, $arch would get replaced by the value of the shell parameter arch, which probably doesn't exist, in which case the $arch is replaced by nothing and just vanishes.)
So that takes care of writing to files as root using sudo. Now for a lengthy digression on ways to output newline-containing text in a shell script. :)
To BLUF it, as they say, my preferred solution would be to just feed a here-document into the above sudo tee command; then there is no need for cat or echo or printf or any other commands at all. The single quotation marks have moved to the sentinel introduction <<'EOF', but they have the same effect there: the body is treated as literal text, so $arch is left alone:
sudo tee -a /etc/pacman.conf >/dev/null <<'EOF'
[archlinuxfr]
Server = http://repo.archlinux.fr/$arch
EOF
But while that's how I'd do it, there are alternatives. Here are a few:
You can stick with one echo per line, but group all of them together in a subshell, so you only have to append to the file once:
(echo '[archlinuxfr]'
echo 'Server = http://repo.archlinux.fr/$arch'
echo ' ') | sudo tee -a /etc/pacman.conf >/dev/null
If you add -e to the echo (and you're using a shell that supports that non-POSIX extension), you can embed newlines directly into the string using \n:
# NON-POSIX - NOT RECOMMENDED
echo -e '[archlinuxfr]\nServer = http://repo.archlinux.fr/$arch\n ' |
sudo tee -a /etc/pacman.conf >/dev/null
But as it says above, that's not POSIX-specified behavior; your shell might just echo a literal -e followed by a string with a bunch of literal \ns instead. The POSIX way of doing that is to use printf instead of echo; it automatically treats its argument like echo -e does, but doesn't automatically append a newline at the end, so you have to stick an extra \n there, too:
printf '[archlinuxfr]\nServer = http://repo.archlinux.fr/$arch\n \n' |
sudo tee -a /etc/pacman.conf >/dev/null
With either of those solutions, what the command gets as an argument string contains the two-character sequence \n, and it's up to the command program itself (the code inside printf or echo) to translate that into a newline. In many modern shells, you have the option of using ANSI quotes $'...', which will translate sequences like \n into literal newlines before the command program ever sees the string. That means such strings work with any command whatsoever, including plain old -e-less echo:
echo $'[archlinuxfr]\nServer = http://repo.archlinux.fr/$arch\n ' |
sudo tee -a /etc/pacman.conf >/dev/null
But, while more portable than echo -e, ANSI quotes are still a non-POSIX extension.
And again, while those are all options, I prefer the straight tee <<EOF solution above.
The problem is that the redirection is being processed by your original shell, not by sudo. Shells are not capable of reading minds and do not know that that particular >> is meant for the sudo and not for it.
You need to:
quote the redirection ( so it is passed on to sudo)
and use sudo -s (so that sudo uses a shell to process the quoted redirection.)
http://www.innovationsts.com/blog/?p=2758
As the instructions are not that clear above I am using the instructions from that blog post. With examples so it is easier to see what you need to do.
$ sudo cat /root/example.txt | gzip > /root/example.gz
-bash: /root/example.gz: Permission denied
Notice that it’s the second command (the gzip command) in the pipeline that causes the error. That’s where our technique of using bash with the -c option comes in.
$ sudo bash -c 'cat /root/example.txt | gzip > /root/example.gz'
$ sudo ls /root/example.gz
/root/example.gz
We can see form the ls command’s output that the compressed file creation succeeded.
The second method is similar to the first in that we’re passing a command string to bash, but we’re doing it in a pipeline via sudo.
$ sudo rm /root/example.gz
$ echo "cat /root/example.txt | gzip > /root/example.gz" | sudo bash
$ sudo ls /root/example.gz
/root/example.gz
sudo bash -c 'echo "[archlinuxfr]" >> /etc/pacman.conf'
STEP 1 create a function in a bash file (write_pacman.sh)
#!/bin/bash
function write_pacman {
tee -a /etc/pacman.conf > /dev/null << 'EOF'
[archlinuxfr]
Server = http://repo.archlinux.fr/\$arch
EOF
}
'EOF' will not interpret $arch variable.
STE2 source bash file
$ source write_pacman.sh
STEP 3 execute function
$ write_pacman
append files (sudo cat):
cat <origin-file> | sudo tee -a <target-file>
append echo to file (sudo echo):
echo <origin> | sudo tee -a <target-file>
(EXTRA) disregard the ouput:
echo >origin> | sudo tee -a <target-file> >/dev/null

Testing whether stdin is a file vs. a pipe vs. a tty

I know for bash and zsh, one can use e.g. [ -t 1 ] to determine if STDIN is an interactive tty session.
However, there doesn't seem to be a way to test whether stdin is being redirected from a file, versus being piped in from a command:
foo < ./file
bar | foo
Is there any way to detect the difference between these two? Separately, is there any way to get the path of the file being redirected from (outside of /proc/self, which is unavailable on macOS)?
You can check if /dev/stdin is a regular file or a pipe:
$ cat tmp.sh
#!/bin/bash
if [ -f /dev/stdin ]; then
echo "file"
elif [ -p /dev/stdin ]; then
echo "pipe"
fi
$ bash tmp.sh < foo.txt
file
$ echo foo | bash tmp.sh
pipe
This relies on /dev/stdin being in your file system, though.
You can also use the stat command, which will return information about standard input given no file name argument. As you mentioned you are using macOS, you can use the %HT format:
$ stat -f %HT
Character Device
$ stat -f %HT < foo.txt
Regular File
$ echo foo | stat -f %HT
Fifo File

tee not working in script but working in bash

So i'm trying to take the line-by-line output of a program, then send it to a file if it matches "CPU", also I want every line to go to the screen.
This command works but only after quitting the script with ^C:
cpuminer-multi/cpuminer -u user -p pass -a sha256d -o stratum+tcp://stratum.pool.com:3333 -t cputhreads | tee >(grep "CPU" >> cpu.txt);
but then if I copy and paste it into a bash script "start.sh"
#!/bin/bash
cpuminer-multi/cpuminer -u user -p pass -a sha256d -o stratum+tcp://stratum.pool.com:3333 -t cputhreads | tee >(grep "CPU" >> cpu.txt);
and run it from bash as "./start.sh", it populates cpu.txt with nothing, even after quitting with ^C
So my questions are
A: Why does it only populate the cpu.txt file after ^C?
B: Why does it work as a plain bash command, but not in a script?

Bash output from expect script to two different files

I am trying to output to two different files using tee. My first file will basically be tail -f /myfile and my second output will be a subset of the first file. I have looked online that they were saying we can use `|
tee >(proc1) >(proc2)
I have tried the above but both my files are blank.
Here is what i have so far:
myscript.sh
ssh root#server 'tail -f /my/dir/text.log' | tee >(/mydir/my.log) >(grep 'string' /mydir/my.log > /mydir/mysecond.log)
myexpect.sh
#!/usr/bin/expect -f
set pass password
spawn /my/dir/myexpect.sh
expect {
"key fingerprint" {send "yes/r"; exp_contiue}
"assword: " {send "$pass\r"}
}
interact
In your script, there are some problems in the usage of tee,
tee >(/mydir/my.log): can be substitute with tee /mydir/my.log, since tee would write to stdout and files, i.e. /mydir/my.log
grep 'string' /mydir/my.log > /mydir/mysecond.log: as I mentioned, tee would also write to stdout, so no need to grep the string from file, you can grep from stdout directly. Use pipeline to do it.
So the whole command shall be modified as followed,
ssh root#server 'tail -f /my/dir/text.log | tee /mydir/my.log | grep --line-buffered "string" > /mydir/mysecond.log'
Edit:
For your further question
The command would hang because of tail -f was still waiting for output the growing file. If you don't want the command hanged, try to remove -f for tail.
Depends on the option -f existed for tail, you shall use two different way to allow the grep write file.
For tail case: grep can successfully write file
For tail -f case: --line-buffered for grep would use line buffering on output

How to refer to redirection file from within a bash script?

I'd like to write a bash script myscript such that issuing this command:
myscript > filename.txt
would return the name of the filename that it's output is being redirected to, filename.txt. Is this possible?
If you are running on Linux, check where /proc/self/fd/1 links to.
For example, the script can do the following:
#!/bin/bash
readlink /proc/self/fd/1
And then run it:
$ ./myscript > filename.txt
$ cat filename.txt
/tmp/filename.txt
Note that if you want to save the value of the output file to a variable or something, you can't use /proc/self since it will be different in the subshell, but you can still use $$:
outputfile=$(readlink /proc/$$/fd/1)
Using lsof:
outfile=$(lsof -p $$ | awk '/1w/{print $NF}')
echo $outfile

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