I recently tried installing IJulia on OS X 10.6.8, with Julia v0.2.1. After installing IPython, I ran Pkg.build("IJulia") and got the following console errors:
julia> Pkg.build("IJulia")
INFO: Building Homebrew
INFO: Cloning brew from https://github.com/staticfloat/homebrew.git
Cloning into '/Users/peterrichter/.julia/v0.2/Homebrew/deps/usr'...
dyld: Library not loaded: /usr/lib/libcurl.4.dylib
Referenced from: /Applications/Julia-0.2.1.app/Contents/Resources/julia/libexec/git-core/git-remote-https
Reason: Incompatible library version: git-remote-https requires version 7.0.0 or later, but libcurl.4.dylib provides version 6.0.0
==============================[ ERROR: Homebrew ]===============================
brew_prefix! not defined
at /Users/peterrichter/.julia/v0.2/Homebrew/src/Homebrew.jl:200
at /Users/peterrichter/.julia/v0.2/Homebrew/deps/build.jl:1
================================================================================
It seems to be complaining about an old version of libcurl (?), but when I run curl -V in Terminal, it says I am using curl 7.19.7. Likewise, executing ipython --version shows that I'm using 2.0.0, the latest version of IPython. Am I misreading the error message? If so, what steps should I take to fix it?
Additional Errors
In addition to the error text I pasted above, it also printed the following:
INFO: Building Nettle
INFO: Attempting to Create directory /Users/peterrichter/.julia/v0.2/Nettle/deps/downloads
INFO: Directory /Users/peterrichter/.julia/v0.2/Nettle/deps/downloads already created
INFO: Downloading file http://www.lysator.liu.se/~nisse/archive/nettle-2.7.1.tar.gz
INFO: Done downloading file http://www.lysator.liu.se/~nisse/archive/nettle-2.7.1.tar.gz
INFO: Attempting to Create directory /Users/peterrichter/.julia/v0.2/Nettle/deps/src
INFO: Directory /Users/peterrichter/.julia/v0.2/Nettle/deps/src already created
INFO: Attempting to Create directory /Users/peterrichter/.julia/v0.2/Nettle/deps
INFO: Directory /Users/peterrichter/.julia/v0.2/Nettle/deps already created
INFO: Attempting to Create directory /Users/peterrichter/.julia/v0.2/Nettle/deps/src/nettle-2.7.1
INFO: Directory /Users/peterrichter/.julia/v0.2/Nettle/deps/src/nettle-2.7.1 already created
INFO: Attempting to Create directory /Users/peterrichter/.julia/v0.2/Nettle/deps/builds/nettle
INFO: Directory /Users/peterrichter/.julia/v0.2/Nettle/deps/builds/nettle already created
INFO: Changing Directory to /Users/peterrichter/.julia/v0.2/Nettle/deps/builds/nettle
checking build system type... x86_64-apple-darwin10.8.0
checking host system type... x86_64-apple-darwin10.8.0
checking for -R flag... none
Searching for libraries
checking /Users/peterrichter/.julia/v0.2/Nettle/deps/usr/lib... not found
checking /usr/local/lib... added
checking /sw/local/lib... not found
checking /sw/lib... not found
checking /usr/gnu/lib... not found
checking /opt/gnu/lib... not found
checking /sw/gnu/lib... not found
checking /usr/freeware/lib... not found
checking /usr/pkg/lib... not found
checking for gcc... gcc
checking whether the C compiler works... no
configure: error: in `/Users/peterrichter/.julia/v0.2/Nettle/deps/builds/nettle':
configure: error: C compiler cannot create executables
See `config.log' for more details
===============================[ ERROR: Nettle ]================================
failed process: Process(`/Users/peterrichter/.julia/v0.2/Nettle/deps/src/nettle-2.7.1/configure --disable-openssl --libdir=/Users/peterrichter/.julia/v0.2/Nettle/deps/usr/lib --prefix=/Users/peterrichter/.julia/v0.2/Nettle/deps/usr`, ProcessExited(77)) [77]
at /Users/peterrichter/.julia/v0.2/Nettle/deps/build.jl:35
================================================================================
INFO: Building ZMQ
INFO: Building IJulia
Found IPython version 2.0.0 ... ok.
Creating julia profile in IPython...
(Existing KernelManager.kernel_cmd setting in ipython_config.py is untouched.)
(Existing IPythonWidget.execute_on_complete_input setting in ipython_qtconsole_config.py is untouched.)
(Existing FrontendWidget.lexer_class setting in ipython_qtconsole_config.py is untouched.)
(Existing NotebookApp.port setting in ipython_notebook_config.py is untouched.)
(Existing ipynblogo.png file untouched.)
(Existing ipynblogo.svg file untouched.)
(Existing favicon.ico file untouched.)
(Existing custom.js file untouched.)
(Existing julia.js file untouched.)
================================[ BUILD ERRORS ]================================
WARNING: Homebrew and Nettle had build errors.
- packages with build errors remain installed in /Users/peterrichter/.julia/v0.2
- build a package and all its dependencies with `Pkg.build(pkg)`
- build a single package by running its `deps/build.jl` script
================================================================================
It looks like you don't have a C compiler installed so the Pkg.add is failing on some of IJulia's nettle dependency.
Your first errors dependency though looks like it's a linking conflict between the bundled git implementation for your julia distribution and the system provided library.
You can see exactly what shared library the git app is using with otool.
otool -L /Applications/Julia-0.2.1.app/Contents/Resources/julia/libexec/git-core/git-remote-https
This should list the full path of the libcurl dylib that the git-remote-https binary is linking to.
You can compare that against the output for otool -L $(which curl) and see if they are linking to the same library.
You can also run otool -L on the referenced libraries themselves to see what versions they are. This should at least tell you what the conflict is. It's possible that you will need to upgrade the git version that your julia distribution uses. But I'm not sure what would be involved there. I just install julia from source which bypasses this particular problem.
You might find it easier to do the same.
What worked for me might be of help to you:
Using latest Anaconda free python, download windows32 exe file from github and extract, start julia.bat, then in the Julia command window type Pkg.add("IJulia"), In another command window type
ipython notebook --profile=julia and enjoy the webpage that opens in your default browser(Chrome)!!
I had trouble because of the syntax of the --profile=julia command part.
I too use macports and not Homebrew.
I seem to have fixed this by changing lines 21,22 in ~/.julia/v0.3/Nettle/deps/build.jl to:
libdirs = String["$(julia_usrdir)/lib"; "/opt/local/lib"]
includedirs = String["$(julia_usrdir)/include"; "/opt/local/include"]
i.e. I added the macports lib and include dirs explicitly.
Can someone please notify the appropriate authorities, cheers.
Related
On OS X 12.1, with I'm building an app that is complaining about:
dyld[12690]: Library not loaded: #rpath/lib/libgstvulkan-1.0.0.dylib
I've installed the following with Homebrew:
GStreamer 1.18.5 installed form homebrew
gst-plugins-ugly
gst-plugins-base
gst-plugins-bad
gst-plugins-good
I've been able to find all the required .dylib files so far, except for libgstvulkan-1.0.0.dylib, which should be included with gst-plugins-bad but doesn't appear to be in the Homebrew install.
Questions:
what am I missing? why don't I have libgstvulkan-1.0.0.dylib on my system and where do I get it?
I'd like to know how I can avoid Homebrew and just install the packages directly but I don't see how to get the bad plugins from that side. Do I need to build from source?
My understanding is there is no vulcan dependency in the homebrew formula, thus when building the artifact, there is no libgstvulkan-1.0.0.dylib artifact.
I tried to include molten-vk for the build and turned on vulkan flag, but it has some issue of finding the vulkan_core.h (which is already in /opt/homebrew/Cellar/molten-vk/1.1.8/libexec/include/vulkan/vulkan_core.h).
Local build error:
==> meson --prefix=/opt/homebrew/Cellar/gst-plugins-bad/1.18.5_1 --libdir=/opt/homebrew/Cellar/gst-plugins-bad/1.18.5_1/lib --buildtype=release --wrap-mode=nofallback -Dintrosp
Last 15 lines from /Users/rui/Library/Logs/Homebrew/gst-plugins-bad/01.meson:
Program g-ir-compiler found: YES (/opt/homebrew/Cellar/gobject-introspection/1.70.0_3/bin/g-ir-compiler)
Program glib-mkenums found: YES (/opt/homebrew/opt/glib/bin/glib-mkenums)
Program glib-mkenums found: YES (/opt/homebrew/opt/glib/bin/glib-mkenums)
Program glib-mkenums found: YES (/opt/homebrew/opt/glib/bin/glib-mkenums)
Program glib-mkenums found: YES (/opt/homebrew/opt/glib/bin/glib-mkenums)
Did not find CMake 'cmake'
Found CMake: NO
Run-time dependency opencv found: NO (tried pkgconfig, framework and cmake)
Run-time dependency opencv4 found: NO (tried pkgconfig, framework and cmake)
Library MoltenVK found: YES
Has header "vulkan/vulkan_core.h" : NO
../gst-libs/gst/vulkan/meson.build:146:2: ERROR: Problem encountered: vulkan plugin enabled, but vulkan.h not found
A full log can be found at /private/tmp/gst-plugins-bad-20220227-60197-31i3hx/gst-plugins-bad-1.18.5/build/meson-logs/meson-log.txt
Feel free to kick off a PR and we can get this forward.
I am using SVN against my will. The current team I work with uses it for version control and they are not always available to help me. I am just trying to go from SVN Version 1.8.13 to the latest 1.9.4
I have download it and I have ran this command too
curl -o subversion-latest.tar.gz http://apache.mirrors.tds.net/subversion/subversion-1.9.4.tar.gz
tar -xvf subversion-latest.tar.gz
I have combined these two different tutorials with no luck.
svn update version
stackover flow issue
I am STUCK at with the configure part..
mymac ~/Downloads/subversion-1.9.4/serf
$ ./configure
-bash: ./configure: No such file or directory
mymac ~/Downloads/subversion-1.9.4/serf
UPDATE
I exited out of serf path and on
`mymac ~/Downloads/subversion-1.9.4` file path i ran the `./configure` My command line ran a bunch of "checks"
configure: Configuring Subversion 1.9.4
configure: creating config.nice checking for gcc...
gcc checking whether the C compiler works...
yes but eventually shot an error at the end...
configure: error: failed to recognize APR_INT64_T_FMT on this platform
mymac ~/Downloads/subversion-1.9.4
I have the latest version of XCode..
UPDATE2 tried neon, again
mymac ~/Downloads/subversion-1.9.4
$ sh get-deps.sh neon
Local directory 'serf' already exists; the downloaded copy won't be used
Local directory 'apr' already exists; the downloaded copy won't be used
Local directory 'apr-util' already exists; the downloaded copy won't be used
get-deps.sh: line 151: get_neon: command not found
Usage: get-deps.sh
Usage: get-deps.sh [ apr | serf | zlib | sqlite | gmock ] ...
mymac ~/Downloads/subversion-1.9.4
$ cd neon
-bash: cd: neon: No such file or directory
UPDATE 3
ran this command first ..
mymac ~/Downloads/subversion-1.9.4
$ ./configure --prefix=/usr/local --with-serf=/usr/local/serf
configure: Configuring Subversion 1.9.4
configure: creating config.nice
checking for gcc... gcc
checking whether the C compiler works... yes
I guess I should install a new version of serf?
checking was serf enabled... no
An appropriate version of serf could not be found, so libsvn_ra_serf
will not be built. If you want to build libsvn_ra_serf, please
install serf 1.3.4 or newer.
configure: error: Serf was explicitly enabled but an appropriate version was not found.
I have no clue where to go from here and how to get around it. I already figure out that neon is no longer supported and I am using serf Can someone offer a different way to go about this? Please? Thanks!
Consider using Brew or MacPorts, if possible. Then this can be as simple as:
brew install svn
If you really must install from source,
it might not be as complicated as the steps you described so far.
Try these much simpler steps exactly:
cd /tmp
curl -o subversion-latest.tar.gz http://apache.mirrors.tds.net/subversion/subversion-1.9.4.tar.gz
tar -xvf subversion-latest.tar.gz
cd subversion-1.9.4
./configure --prefix=/tmp/local
make
make install
This will (hopefully) build Subversion and install it into /tmp/local. Test with this command:
/tmp/local/bin/svn --version
If the output looks good, then repeat from the start, but use a different value for --prefix, as appropriate in your environment.
(I tried, and this worked well for me, right now, btw.)
Maybe it's not so simple. In that case please update your question with the output where you get stuck.
checking whether cairo's PNG functions feature could be enabled... no
I have been following the setup for configuring node canvas. Cairo is needed but i am having issues trying to set it up. https://github.com/Automattic/node-canvas/wiki/Installation---OSX
If libpng fails and you get the error "error: recommended PNG functions feature could not be enabled", try installing this binary and re-running the configure step.
I followed above by installing the binaries on Mac OS 9 and run the configuration command and still no luck. I am running the install shell script in node-canvas repository:
https://github.com/Automattic/node-canvas/blob/master/install
In my /usr/local/lib I currently have:
dtrace libjpeg.8.dylib libpng.a libpng14.a
libfreetype.6.dylib libjpeg.a libpng.dylib libpng14.dylib
libfreetype.a libjpeg.dylib libpng.la libpng14.la
libfreetype.dylib libjpeg.la libpng12.0.dylib libpng15.15.dylib
libfreetype.la libpixman-1.0.dylib libpng12.0.dylib.dSYM libpng15.15.dylib.dSYM
libgif.4.1.6.dylib libpixman-1.a libpng12.a libpng15.a
libgif.4.dylib libpixman-1.dylib libpng12.dylib libpng15.dylib
libgif.a libpixman-1.la libpng12.la libpng15.la
libgif.dylib libpng.3.dylib libpng14.14.dylib node_modules
libgif.la libpng.3.dylib.dSYM libpng14.14.dylib.dSYM pkgconfig
Libpng-1.6.10 has been replaced by libpng-1.6.12.
In your install script, change
LIBPNG="http://downloads.sourceforge.net/project/libpng/libpng16/1.6.10/libpng-1.6.10.tar.gz"
to
LIBPNG="http://downloads.sourceforge.net/project/libpng/libpng16/1.6.12/libpng-1.6.12.tar.gz"
I have a set of detailed instructions for building cairo here:
https://github.com/soegaard/racket-osx-libs
There resulting libraries are here:
https://github.com/soegaard/racket-osx-libs/tree/master/lib
I'm trying to install rpy2 for Python3 with the following command:
easy_install-3.2 rpy2
This gives a few warnings and an error:
warning: no previously-included files matching '*patch*' found anywhere in distribution
warning: no previously-included files matching '*diff*' found anywhere in distribution
warning: no previously-included files matching '.hg' found anywhere in distribution
no previously-included directories found matching 'dist'
gcc-4.2 not found, using clang instead
Compiling with an SDK that doesn't seem to exist: /Developer/SDKs/MacOSX10.6.sdk
Please check your Xcode installation
build/python3_rpy/rpy/rinterface/_rinterface.c:51:10: fatal error: 'signal.h' file not found
#include <signal.h>
^
1 error generated.
error: Setup script exited with error: command 'clang' failed with exit status 1
The file /Developer/SDKs/MacOSX10.6.sdk seems to be missing even though I have xcode 4.5.1 installed.
There is no file called MacOSX10.6.sdk in the "Downloads for Apple Developers" on the Apple home page. What do I do?
Ps. It all works well if I do not specify python3.
What is happening is that python was built with a pre-4.3 version of Xcode where the tools and SDKs were installed in /Developer. This is no longer the case with Xcode 4.3 where the tools and SDKs are part of the Xcode.app bundle. It also looks like python was compiled using gcc rather than clang.
I would recommend dumping the installation of python3 you have and installing it via macports, which will use the latest Xcode to build its ports and will therefore be able to compile additional python modules.
Once you have installed macports, simply do:
$ sudo port install python33
There is also a good chance those python modules can be installed by simply doing:
$ sudo port install whizzopymod
EDIT: Scratch that last part as macports doesn't have rpy2 for python3. You'll have to continue using easy_install I guess.
I work off my i: drive
I've downloaded the following mono source file mono-2.11.2.tar.bz2
I've installed the windows version of mono v2.11.2 to "I:\Mono-2.11.2"
I installed cygwin as per the following instructions found on the following webpage http://shana.worldofcoding.com/en/mono_cygwin_tutorial.html
I replaced the "make.exe" with the one from the mono website as per instruction. I had to get one more file "cygintl-2.dll" which resides in cygwin package libintl2/libintl2-0.12.1-3
I added the following my .bashrc file. I had to change "c/Mono-2.11.2/bin" to "i/Mono-2.11.2/bin"
PATH=.:/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/cygdrive/i/Mono-2.11.2/bin
PKG_CONFIG_PATH=.:/lib/pkgconfig:/cygdrive/i/Mono-2.11.2/lib/pkgconfig
LD_LIBRARY_PATH=.:/usr/local/lib:/usr/lib:/lib:/cygdrive/i/Mono-2.11.2/lib
export PATH PKG_CONFIG_PATH LD_LIBRARY_PATH
I placed my mono source under the folder specified: /usr/src/mono/
So my dirs looks like:
i:
i:\cygwin\
i:\cygwin\usr\src\mono
i:\cygwin\usr\src\mono\mono
i:\cygwin\usr\src\mono\mcs etc etc
i:\Mono-2.11.2\bin etc
Now the instructions says I must change dirs to /usr/src/mono/mono and run "./autogen.sh --prefix=/usr/local" from the cygwin terminal
However that doesnt work. Running the above command from /usr/src/mono/ works fine.
Now heres the problem. The next instruction is to run "make". However this comes up with :
$ make
make: *** No targets specified and no makefile found. Stop.
I even tried running it from the /usr/src/mono/mono dir. Still no luck.
Can someone please suggest what I should do to be able to build the mono source on windows 7?
Update:
I needed to install the **gnu c++ compiler (g++)**. I just ran the cygwin setup again, searched for g++ and installed that. The autogen.sh ran to completion
The last lines of ./autogen.sh --prefix=/usr/local output should
look like bellow with Now type make to compile at the end. And it
generats Makefile in the same directory.
I think in your case ./autogen.sh failed. You can keep a log file
and check what it is complaining about.
./autogen.sh --prefix=/usr/local 2>&1 | tee autogen.log
More info: http://en.wikipedia.org/wiki/GNU_build_system
The end of the ./autogen.sh ouptut:
config.status: executing quiet-libtool commands
config.status: executing default commands
mcs source: mcs
olive source:
Engine:
GC: sgen and bundled Boehm GC with typed GC and parallel mark
TLS: __thread
SIGALTSTACK: yes
Engine: Building and using the JIT
oprofile: no
BigArrays: no
DTrace: no
LLVM Back End: no (dynamically loaded: no)
Libraries:
Moon Profile: no (boehm)
MonoDroid: no
MonoTouch: no
Mobile: no
JNI support: IKVM Native
libgdiplus: assumed to be installed
zlib: system zlib
Now type `make' to compile