bash script not getting piped data - bash

I'm trying to write a bash script that will manipulate the data piped from xsel.
...
ary=()
while read data; do
echo $data
ary=( "${ary[#]}" "$data" )
done
The problem is there is nothing being read when I call:
xsel | myscript.sh
I have tried
echo "testing testing" | myscript.sh
and that works, and I also made sure there was something coming from xsel
xsel | festival --tts --pipe
# will read the clipboard string piped from xsel aloud
Any Suggestions? Thanks in advance

read fails if it can't read a full line, and xsel doesn't output a line feed.
Replace your loop with:
readarray ary # new in Bash 4
If you're only adding lines in an array as a proxy for sticking all the data in a variable, you can instead do:
input=$(cat)

Related

This loop will only ever run once. Bad quoting or missing glob/expansion?

Im working on a bash script that recive a list of processes and do a bunch of things with them, however when I want to analyze them with a loop this error happens.
Here is some code:
#! /bin/bash
ls /proc | grep ^9 > processes.txt
cat processes.txt
for line in $processes.txt
do
echo "$line"
done
PD: Im preatty new to bash
$ does parameter expansion; it does not expand a file name to the contents of the file.
Use a while read loop instead.
while IFS= read -r line; do
echo "$line"
done < processes.txt

How to redirect stdin to file in bash

Consider this very simple bash script:
#!/bin/bash
cat > /tmp/file
It redirects whatever you pipe into it to a file. e.g.
echo "hello" | script.sh
and "hello" will be in the file /tmp/file. This works... but it seems like there should be a native bash way of doing this without using "cat". But I can't figure it out.
NOTE:
It must be in a script. I want the script to operate on the file contents afterwards.
It must be in a file, the steps afterward in my case involve a tool that only reads from a file.
I already have a pretty good way of doing this - its just that it seems like a hack. Is there a native way? Like "/tmp/file < 0 " or "0> /tmp/file". I thought bash would have a native syntax to do this...
You could simply do
cp /dev/stdin myfile.txt
Terminate your input with Ctrl+D or Ctrl+Z and, viola! You have your file created with text from the stdin.
echo "$(</dev/stdin)" > /tmp/file
terminate your input with ENTERctrl+d
I don't think there is a builtin that reads from stdin until EOF, but you can do this:
#!/bin/bash
exec > /tmp/file
while IFS= read -r line; do
printf '%s\n' "$line"
done
Another way of doing it using pure BASH:
#!/bin/bash
IFS= read -t 0.01 -r -d '' indata
[[ -n $indata ]] && printf "%s" "$indata" >/tmp/file
IFS= and -d '' causes all of stdin data to be read into a variable indata.
Reason of using -t 0.01: When this script is called with no input pipe then read will timeout after negligible 0.01 seconds delay. If there is any data available in input it will be read in indata variable and it will be redirected to >/tmp/file.
Another option: dd of=/tmp/myfile/txt
Note: This is not a built-in, however, it might help other people looking for a simple solution.
Why don't you just
GENERATE INPUT | (
# do whatever you like to the input here
)
But sometimes, especially when you want to complete the input first, then operate on the modified output, you should still use temporary files:
TMPFILE="/tmp/fileA-$$"
GENERATE INPUT | (
# modify input
) > "$TMPFILE"
(
# do something with the input from TMPFILE
) < "$TMPFILE"
rm "$TMPFILE"
If you don't want the program to end after reaching EOF, this might be helpful.
#!/bin/bash
exec < <(tail -F /tmp/a)
cat -

Reusing output from last command in Bash

Is the output of a Bash command stored in any register? E.g. something similar to $? capturing the output instead of the exit status.
I could assign the output to a variable with:
output=$(command)
but that's more typing...
You can use $(!!)
to recompute (not re-use) the output of the last command.
The !! on its own executes the last command.
$ echo pierre
pierre
$ echo my name is $(!!)
echo my name is $(echo pierre)
my name is pierre
The answer is no. Bash doesn't allocate any output to any parameter or any block on its memory. Also, you are only allowed to access Bash by its allowed interface operations. Bash's private data is not accessible unless you hack it.
Very Simple Solution
One that I've used for years.
Script (add to your .bashrc or .bash_profile)
# capture the output of a command so it can be retrieved with ret
cap () { tee /tmp/capture.out; }
# return the output of the most recent command that was captured by cap
ret () { cat /tmp/capture.out; }
Usage
$ find . -name 'filename' | cap
/path/to/filename
$ ret
/path/to/filename
I tend to add | cap to the end of all of my commands. This way when I find I want to do text processing on the output of a slow running command I can always retrieve it with ret.
If you are on mac, and don't mind storing your output in the clipboard instead of writing to a variable, you can use pbcopy and pbpaste as a workaround.
For example, instead of doing this to find a file and diff its contents with another file:
$ find app -name 'one.php'
/var/bar/app/one.php
$ diff /var/bar/app/one.php /var/bar/two.php
You could do this:
$ find app -name 'one.php' | pbcopy
$ diff $(pbpaste) /var/bar/two.php
The string /var/bar/app/one.php is in the clipboard when you run the first command.
By the way, pb in pbcopy and pbpaste stand for pasteboard, a synonym for clipboard.
One way of doing that is by using trap DEBUG:
f() { bash -c "$BASH_COMMAND" >& /tmp/out.log; }
trap 'f' DEBUG
Now most recently executed command's stdout and stderr will be available in /tmp/out.log
Only downside is that it will execute a command twice: once to redirect output and error to /tmp/out.log and once normally. Probably there is some way to prevent this behavior as well.
Inspired by anubhava's answer, which I think is not actually acceptable as it runs each command twice.
save_output() {
exec 1>&3
{ [ -f /tmp/current ] && mv /tmp/current /tmp/last; }
exec > >(tee /tmp/current)
}
exec 3>&1
trap save_output DEBUG
This way the output of last command is in /tmp/last and the command is not called twice.
Yeah, why type extra lines each time; agreed.
You can redirect the returned from a command to input by pipeline, but redirecting printed output to input (1>&0) is nope, at least not for multiple line outputs.
Also you won't want to write a function again and again in each file for the same. So let's try something else.
A simple workaround would be to use printf function to store values in a variable.
printf -v myoutput "`cmd`"
such as
printf -v var "`echo ok;
echo fine;
echo thankyou`"
echo "$var" # don't forget the backquotes and quotes in either command.
Another customizable general solution (I myself use) for running the desired command only once and getting multi-line printed output of the command in an array variable line-by-line.
If you are not exporting the files anywhere and intend to use it locally only, you can have Terminal set-up the function declaration. You have to add the function in ~/.bashrc file or in ~/.profile file. In second case, you need to enable Run command as login shell from Edit>Preferences>yourProfile>Command.
Make a simple function, say:
get_prev() # preferably pass the commands in quotes. Single commands might still work without.
{
# option 1: create an executable with the command(s) and run it
#echo $* > /tmp/exe
#bash /tmp/exe > /tmp/out
# option 2: if your command is single command (no-pipe, no semi-colons), still it may not run correct in some exceptions.
#echo `"$*"` > /tmp/out
# option 3: (I actually used below)
eval "$*" > /tmp/out # or simply "$*" > /tmp/out
# return the command(s) outputs line by line
IFS=$(echo -en "\n\b")
arr=()
exec 3</tmp/out
while read -u 3 -r line
do
arr+=($line)
echo $line
done
exec 3<&-
}
So what we did in option 1 was print the whole command to a temporary file /tmp/exe and run it and save the output to another file /tmp/out and then read the contents of the /tmp/out file line-by-line to an array.
Similar in options 2 and 3, except that the commands were exectuted as such, without writing to an executable to be run.
In main script:
#run your command:
cmd="echo hey ya; echo hey hi; printf `expr 10 + 10`'\n' ; printf $((10 + 20))'\n'"
get_prev $cmd
#or simply
get_prev "echo hey ya; echo hey hi; printf `expr 10 + 10`'\n' ; printf $((10 + 20))'\n'"
Now, bash saves the variable even outside previous scope, so the arr variable created in get_prev function is accessible even outside the function in the main script:
#get previous command outputs in arr
for((i=0; i<${#arr[#]}; i++))
do
echo ${arr[i]}
done
#if you're sure that your output won't have escape sequences you bother about, you may simply print the array
printf "${arr[*]}\n"
Edit:
I use the following code in my implementation:
get_prev()
{
usage()
{
echo "Usage: alphabet [ -h | --help ]
[ -s | --sep SEP ]
[ -v | --var VAR ] \"command\""
}
ARGS=$(getopt -a -n alphabet -o hs:v: --long help,sep:,var: -- "$#")
if [ $? -ne 0 ]; then usage; return 2; fi
eval set -- $ARGS
local var="arr"
IFS=$(echo -en '\n\b')
for arg in $*
do
case $arg in
-h|--help)
usage
echo " -h, --help : opens this help"
echo " -s, --sep : specify the separator, newline by default"
echo " -v, --var : variable name to put result into, arr by default"
echo " command : command to execute. Enclose in quotes if multiple lines or pipelines are used."
shift
return 0
;;
-s|--sep)
shift
IFS=$(echo -en $1)
shift
;;
-v|--var)
shift
var=$1
shift
;;
-|--)
shift
;;
*)
cmd=$option
;;
esac
done
if [ ${#} -eq 0 ]; then usage; return 1; fi
ERROR=$( { eval "$*" > /tmp/out; } 2>&1 )
if [ $ERROR ]; then echo $ERROR; return 1; fi
local a=()
exec 3</tmp/out
while read -u 3 -r line
do
a+=($line)
done
exec 3<&-
eval $var=\(\${a[#]}\)
print_arr $var # comment this to suppress output
}
print()
{
eval echo \${$1[#]}
}
print_arr()
{
eval printf "%s\\\n" "\${$1[#]}"
}
Ive been using this to print space-separated outputs of multiple/pipelined/both commands as line separated:
get_prev -s " " -v myarr "cmd1 | cmd2; cmd3 | cmd4"
For example:
get_prev -s ' ' -v myarr whereis python # or "whereis python"
# can also be achieved (in this case) by
whereis python | tr ' ' '\n'
Now tr command is useful at other places as well, such as
echo $PATH | tr ':' '\n'
But for multiple/piped commands... you know now. :)
-Himanshu
Like konsolebox said, you'd have to hack into bash itself. Here is a quite good example on how one might achieve this. The stderred repository (actually meant for coloring stdout) gives instructions on how to build it.
I gave it a try: Defining some new file descriptor inside .bashrc like
exec 41>/tmp/my_console_log
(number is arbitrary) and modify stderred.c accordingly so that content also gets written to fd 41. It kind of worked, but contains loads of NUL bytes, weird formattings and is basically binary data, not readable. Maybe someone with good understandings of C could try that out.
If so, everything needed to get the last printed line is tail -n 1 [logfile].
Not sure exactly what you're needing this for, so this answer may not be relevant. You can always save the output of a command: netstat >> output.txt, but I don't think that's what you're looking for.
There are of course programming options though; you could simply get a program to read the text file above after that command is run and associate it with a variable, and in Ruby, my language of choice, you can create a variable out of command output using 'backticks':
output = `ls` #(this is a comment) create variable out of command
if output.include? "Downloads" #if statement to see if command includes 'Downloads' folder
print "there appears to be a folder named downloads in this directory."
else
print "there is no directory called downloads in this file."
end
Stick this in a .rb file and run it: ruby file.rb and it will create a variable out of the command and allow you to manipulate it.
If you don't want to recompute the previous command you can create a macro that scans the current terminal buffer, tries to guess the -supposed- output of the last command, copies it to the clipboard and finally types it to the terminal.
It can be used for simple commands that return a single line of output (tested on Ubuntu 18.04 with gnome-terminal).
Install the following tools: xdootool, xclip , ruby
In gnome-terminal go to Preferences -> Shortcuts -> Select all and set it to Ctrl+shift+a.
Create the following ruby script:
cat >${HOME}/parse.rb <<EOF
#!/usr/bin/ruby
stdin = STDIN.read
d = stdin.split(/\n/)
e = d.reverse
f = e.drop_while { |item| item == "" }
g = f.drop_while { |item| item.start_with? "${USER}#" }
h = g[0]
print h
EOF
In the keyboard settings add the following keyboard shortcut:
bash -c '/bin/sleep 0.3 ; xdotool key ctrl+shift+a ; xdotool key ctrl+shift+c ; ( (xclip -out | ${HOME}/parse.rb ) > /tmp/clipboard ) ; (cat /tmp/clipboard | xclip -sel clip ) ; xdotool key ctrl+shift+v '
The above shortcut:
copies the current terminal buffer to the clipboard
extracts the output of the last command (only one line)
types it into the current terminal
I have an idea that I don't have time to try to implement immediately.
But what if you do something like the following:
$ MY_HISTORY_FILE = `get_temp_filename`
$ MY_HISTORY_FILE=$MY_HISTORY_FILE bash -i 2>&1 | tee $MY_HISTORY_FILE
$ some_command
$ cat $MY_HISTORY_FILE
$ # ^You'll want to filter that down in practice!
There might be issues with IO buffering. Also the file might get too huge. One would have to come up with a solution to these problems.
I think using script command might help. Something like,
script -c bash -qf fifo_pid
Using bash features to set after parsing.
Demo for non-interactive commands only: http://asciinema.org/a/395092
For also supporting interactive commands, you'd have to hack the script binary from util-linux to ignore any screen-redrawing console codes, and run it from bashrc to save your login session's output to a file.
You can use -exec to run a command on the output of a command. So it will be a reuse of the output as an example given with a find command below:
find . -name anything.out -exec rm {} \;
you are saying here -> find a file called anything.out in the current folder, if found, remove it. If it is not found, the remaining after -exec will be skipped.

How to wrap piped input to stdout in a bash script?

I want to write a bash script that will wrap piped input with some text.
Based on Googling and trying to pick from examples.
Here is what I have so far, that does not work:
#!/bin/sh
if readlink /proc/$$/fd/0 | grep -q "^pipe:"; then
echo "{ "template":{"name":"contact sheet template","root":"root","parameters": ["pages"]},"pages":"
cat
echo "}"
fi
I am receiving a JSON list from another program as piped input and I want to output before and afterwards with the above text before I pipe the results to the next program.
program_1 | wrapper.sh | program_2 > outputfile
But it doesn't output anything.
Can someone with more bash expertise point me in the right direction?
Personally I'll search in this way :
myscript.sh
echo 'BEFORE' $(cat) 'AFTER'
Do you mean your script is reading standard input from a pipe, such as
$ other-process | my-script
?
Then the commands in your script will simply inherit standard input from the pipe
#!/bin/sh
# Output preamble
cat <<EOF
{ "template":{"name":"contact sheet template","root":"root","parameters": ["pages"]},"pages":
EOF
cat # This reads from standard input inherited from your script
# Output the closing
cat <<EOF
}
EOF

bash tee remove color

I'm currently using the following to capture everything that goes to the terminal and throw it into a log file
exec 4<&1 5<&2 1>&2>&>(tee -a $LOG_FILE)
however, I don't want color escape codes/clutter going into the log file. so i have something like this that sorta works
exec 4<&1 5<&2 1>&2>&>(
while read -u 0; do
#to terminal
echo "$REPLY"
#to log file (color removed)
echo "$REPLY" | sed -r 's/\x1B\[([0-9]{1,2}(;[0-9]{1,2})?)?[m|K]//g' >> $LOG_FILE
done
unset REPLY #tidy
)
except read waits for carriage return which isn't ideal for some portions of the script (e.g. echo -n "..." or printf without \n).
Follow-up to Jonathan Leffler's answer:
Given the example script test.sh:
#!/bin/bash
LOG_FILE="./test.log"
echo -n >$LOG_FILE
exec 4<&1 5<&2 1>&2>&>(tee -a >(sed -r 's/\x1B\[([0-9]{1,2}(;[0-9]{1,2})?)?[m|K]//g' > $LOG_FILE))
##### ##### #####
# Main
echo "starting execution"
printf "\n\n"
echo "color test:"
echo -e "\033[0;31mhello \033[0;32mworld\033[0m!"
printf "\n\n"
echo -e "\033[0;36mEnvironment:\033[0m\n foo: cat\n bar: dog\n your wife: hot\n fix: A/C"
echo -n "Before we get started. Is the above information correct? "
read YES
echo -e "\n[READ] $YES" >> $LOG_FILE
YES=$(echo "$YES" | sed 's/^\s*//;s/\s*$//')
test ! "$(echo "$YES" | grep -iE '^y(es)?$')" && echo -e "\nExiting... :(" && exit
printf "\n\n"
#...some hundreds of lines of code later...
echo "Done!"
##### ##### #####
# End
exec 1<&4 4>&- 2<&5 5>&-
echo "Log File: $LOG_FILE"
The output to the terminal is as expected and there is no color escape codes/clutter in the log file as desired. However upon examining test.log, I do not see the [READ] ... (see line 21 of test.sh).
The log file [of my actual bash script] contains the line Log File: ... at the end of it even after closing the 4 and 5 fds. I was able to resolve the issue by putting a sleep 1 before the second exec - I assume there's a race condition or fd shenanigans to blame for it. Unfortunately for you guys, I am not able to reproduce this issue with test.sh but I'd be interested in any speculation anyone may have.
Consider using the pee program discussed in Is it possible to distribute stdin over parallel processes. It would allow you to send the log data through your sed script, while continuing to send the colours to the actual output.
One major advantage of this is that it would remove the 'execute sed once per line of log output'; that is really diabolical for performance (in terms of number of processes executed, if nothing else).
I know it's not a perfect solution, but cat -v will make non visible chars like \x1B to be converted into visible form like ^[[1;34m. The output will be messy, but it will be ascii text at least.
I use to do stuff like this by setting TERM=dumb before running my command. That pretty much removed any control characters except for tab, CR, and LF. I have no idea if this works for your situation, but it's worth a try. The problem is that you won't see color encodings on your terminal either since it's a dumb terminal.
You can also try either vis or cat (especially the -v parameter) and see if these do something for you. You'd simply put them in your pipeline like this:
exec 4<&1 5<&2 1>&2>&>(tee -a | cat -v | $LOG_FILE)
By the way, almost all terminal programs have an option to capture the input, and most clean it up for you. What platform are you on, and what type of terminal program are you using?
You could attempt to use the -n option for read. It reads in n characters instead of waiting for a new line. You could set it to one. This would increase the number of iteration the code runs, but it would not wait for newlines.
From the man:
-n NCHARS read returns after reading NCHARS characters rather than waiting for a complete line of input.
Note: I have not tested this
You can use ANSIFilter to strip or transform console output with ANSI escape sequences.
See http://www.andre-simon.de/zip/download.html#ansifilter
Might not screen -L or the script commands be viable options instead of this exec loop?

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