this is probably a very basic question. I am using the bash shell still (Catalina). And I downloaded gromacs. Every time I open a new terminal window I first have to put
source /usr/local/gromacs/bin/GMXRC
in first, otherwise I will just get command not found.
How can I permanently source this so that I don't have to reenter it all the time?
I tried editing the /etc/paths file but that didn't work.
If you are still using the bash shell on macOS, all you have to do is:
Put the line:
source /usr/local/gromacs/bin/GMXRC
at the end in .bash_profile.
.bash_profile is in home directory, so you can open it like:
open ~/.bash_profile
Why .bash_profile?
.bash_profile is executed whenever a login interactive shell starts and on mac, every interactive shell is a login shell by default.
If in case you switch to zsh, instead of .bash_profile, I think .zlogin should be used.
But that would depend entirely on your need. Read about zsh configuration files in case you ever need that.
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On Linux, how can I add a directory to the $PATH so it remains persistent across different sessions?
Background
I'm trying to add a directory to my path so it will always be in my Linux path. I've tried:
export PATH=$PATH:/path/to/dir
This works, however each time I exit the terminal and start a new terminal instance, this path is lost, and I need to run the export command again.
How can I do it so this will be set permanently?
You need to add it to your ~/.profile or ~/.bashrc file.
export PATH="$PATH:/path/to/dir"
Depending on what you're doing, you also may want to symlink to binaries:
cd /usr/bin
sudo ln -s /path/to/binary binary-name
Note that this will not automatically update your path for the remainder of the session. To do this, you should run:
source ~/.profile
or
source ~/.bashrc
There are multiple ways to do it. The actual solution depends on the purpose.
The variable values are usually stored in either a list of assignments or a shell script that is run at the start of the system or user session. In case of the shell script you must use a specific shell syntax and export or set commands.
System wide
/etc/environment List of unique assignments. Allows references. Perfect for adding system-wide directories like /usr/local/something/bin to PATH variable or defining JAVA_HOME. Used by PAM and systemd.
/etc/environment.d/*.conf List of unique assignments. Allows references. Perfect for adding system-wide directories like /usr/local/something/bin to PATH variable or defining JAVA_HOME. The configuration can be split into multiple files, usually one per each tool (Java, Go, and Node.js). Used by systemd that by design do not pass those values to user login shells.
/etc/xprofile Shell script executed while starting X Window System session. This is run for every user that logs into X Window System. It is a good choice for PATH entries that are valid for every user like /usr/local/something/bin. The file is included by other script so use POSIX shell syntax not the syntax of your user shell.
/etc/profile and /etc/profile.d/* Shell script. This is a good choice for shell-only systems. Those files are read only by shells in login mode.
/etc/<shell>.<shell>rc. Shell script. This is a poor choice because it is single shell specific. Used in non-login mode.
User session
~/.pam_environment. List of unique assignments, no references allowed. Loaded by PAM at the start of every user session irrelevant if it is an X Window System session or shell. You cannot reference other variables including HOME or PATH so it has limited use. Used by PAM.
~/.xprofile Shell script. This is executed when the user logs into X Window System system. The variables defined here are visible to every X application. Perfect choice for extending PATH with values such as ~/bin or ~/go/bin or defining user specific GOPATH or NPM_HOME. The file is included by other script so use POSIX shell syntax not the syntax of your user shell. Your graphical text editor or IDE started by shortcut will see those values.
~/.profile, ~/.<shell>_profile, ~/.<shell>_login Shell script. It will be visible only for programs started from terminal or terminal emulator. It is a good choice for shell-only systems. Used by shells in login mode.
~/.<shell>rc. Shell script. This is a poor choice because it is single shell specific. Used by shells in non-login mode.
Notes
GNOME on Wayland starts a user login shell to get the environment. It effectively uses the login shell configurations ~/.profile, ~/.<shell>_profile, ~/.<shell>_login files.
Man pages
environment
environment.d https://linux.die.net/man/1/environment.d
bash
dash
Distribution-specific documentation
Ubuntu
Arch Linux
Related
Difference between Login Shell and Non-Login Shell?
In Ubuntu, edit /etc/environment. Its sole purpose is to store environment variables. Originally the $PATH variable is defined here.
This is a paste from my /etc/environment file:
PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games"
So you can just open up this file as root and add whatever you want.
For immediate results,
Run (try as normal user and root):
source /etc/environment && export PATH
If you use Z shell (zsh), add this line right after the comments in /etc/zsh/zshenv file:
source /etc/environment
I encountered this little quirk on Ubuntu 15.10 (Wily Werewolf), but if your zsh is not getting the correct PATH, this could be why.
For Bash, you can put the export declaration in ~/.bashrc. For example, my .bashrc contains this line:
export PATH=/var/lib/gems/1.8/bin:/home/ash/.bin:$PATH
You may set $PATH permanently in two ways.
To set the path for a particular user:
You may need to make the entry in file .bash_profile in the home directory for the user.
E.g, in my case I will set the java path in the Tomcat user profile*
echo "export PATH=$PATH:/path/to/dir" >> /home/tomcat/.bash_profile
To set a common path for all system users, you may need to set the path like this:
echo "export PATH=$PATH:/path/to/dir" >> /etc/profile
You can use on CentOS or Red Hat Linux (RHEL) for the local user:
echo $"export PATH=\$PATH:$(pwd)" >> ~/.bash_profile
This adds the current directory (or you can use another directory) to the PATH. This makes it permanent, but it takes effect at the next user logon.
If you don't want do a re-logon, then you can use:
source ~/.bash_profile
That reloads the # User specific environment and startup programs. This comment is present in file .bash_profile.
You can also set it permanently, editing one of these files:
/etc/profile (for all users)
~/.bash_profile (for current user)
~/.bash_login (for current user)
~/.profile (for current user)
You can also use /etc/environment to set a permanent PATH environment variable, but it does not support variable expansion.
Extracted from: Linux: Añadir ruta al PATH
I think the most elegant way is:
Add this in the ~/.bashrc file.
Run this command:
gedit ~/.bashrc
Add your path inside it:
export PATH=$PATH:/opt/node/bin
source ~/.bashrc
(Ubuntu)
Modify the "/etc/profile" file:
vi /etc/profile
Press the I key to enter editing mode and move the cursor to the end of the file. Additional entries：
export PATH=$PATH:/path/to/dir;
Press the Esc key to exit edit mode, and :wq to save the file.
Make the configuration effective
source /etc/profile
Explanation：
The profile file works for all users. If you want it to be valid only for the active user, change the ".bashrc" file.
I stumbled across this question yesterday when searching for a way to add a folder containing my own scripts to the PATH - and was surprised to find out that my own ~/.profile file (on Linux Mint 18.1) already contained this:
# set PATH so it includes user's private bin if it exists
if [ -d "$HOME/bin" ] ; then
PATH="$HOME/bin:$PATH"
fi
Thus, all I had to do was create the folder ~/bin and put my scripts there.
You can add that line to your console configuration files (e.g., .bashrc, or to .profile).
After so much research, I found a simple solution for this (I am using Elementary OS), inspired by Flutter – Step by Step Installation on Linux – Ubuntu.
Run the following command to open the .bashrc file in edit mode. (You
may also use vi or any other editor).
~$ sudo nano ~/.bashrc
Add the following line at the end of the file and save.
export PATH="[FLUTTER_SDK_PATH]/flutter/bin:$PATH"
For example:
export PATH="/home/rageshl/dev/flutter/bin:$PATH"
I believe this is the permanent solution for setting the path in Flutter in a Ubuntu distribution.
It can be directly added by using the following command:
echo 'export PATH=$PATH:/new/directory' >> ~/.zshrc
source ~/.zshrc
One way to add a permanent path, which worked for me, is:
cd /etc/profile.d
touch custom.sh
vi custom.sh
export PATH=$PATH:/path according to your setting/
Restart your computer and here we go; the path will be there permanently.
Add script file [name_of_script].sh to the /etc/profile.d folder with the line:
export PATH=$PATH:/dir
Every script within the /etc/profile.d folder is automatically executed by /etc/profile on login.
My answer is in reference to the setting up of a Go environment on Ubuntu Linux (amd64). I have faced the same trouble of setting the path of environment variables (GOPATH and GOBIN), losing it on terminal exit and rebuilding it using the source <file_name> every time.
The mistake was to put the path (GOPATH and GOBIN) in ~/.bash_profile file. After wasting a few good hours, I found that the solution was to put GOPATH and GOBIN in the ~/.bash_rc file in the manner:
export GOPATH=$HOME/go
export GOBIN=$GOPATH/bin
export PATH=$PATH:$GOPATH:$GOBIN
And in doing so, the Go installation worked fine and there were no path losses.
The reason with which this issue can be related is that settings for non-login shells, like your Ubuntu terminal or GNOME terminal where we run the Go code, are taken from the ~./bash_rc file and the settings for login shells are taken from ~/.bash_profile file. And from the ~/.profile file if the ~/.bash_profile file is unreachable.
The files where you add the export command depends on if you are in login-mode or non-login-mode.
If you are in login-mode, the files you are looking for are either /etc/bash or /etc/bash.bashrc.
If you are in non-login-mode, you are looking for the file /.profile or for the files within the directory /.profiles.d
The files mentioned above is where the system variables are.
Permanently add to the PATH variable
Global:
echo "export PATH=$PATH:/new/path/variable" >> /etc/profile
Local (for the current user only):
echo "export PATH=$PATH:/new/path/variable" >> ~/.profile
For global, restart. For local, relogin.
Example
Before:
$ cat /etc/profile
#!/bin/sh
export PATH=/usr/bin:/usr/sbin:/bin:/sbin
After:
$ cat /etc/profile
#!/bin/sh
export PATH=/usr/bin:/usr/sbin:/bin:/sbin
export PATH=/usr/bin:/usr/sbin:/bin:/sbin:/new/path/variable
Alternatively you can just edit file "profile":
$ cat /etc/profile
#!/bin/sh
export PATH=/usr/bin:/usr/sbin:/bin:/sbin:/new/path/variable
Another way (thanks gniourf_gniourf):
echo 'PATH=$PATH:/new/path/variable' >> /etc/profile
You shouldn't use double quotes here! echo 'export
PATH=$PATH:/new/path/variable'... And by the way, the export keyword
is very likely useless as the PATH variable is very likely already
marked as exported. – gniourf_gniourf
Zues77 has the right idea. The OP didn't say "How can I hack my way through this?". The OP wanted to know how to permanently append to $PATH:
sudo nano /etc/profile
This is where it is set for everything and is the best place to change it for all things needing $PATH.
Let's say you're running macOS. You have a binary you trust and would like to make available across your system, but don't necessarily want the directory in which the binary is to be added to your PATH.
You can opt to copy/move the binary to /usr/local/bin, which should already be in your PATH. This will make the binary executable like any other binary you may already have access to in your terminal.
The simplest way is the following line,
PATH="<directory you want to include>:$PATH"
in your .bashrc file in the home directory.
It will not get reset even if you close the terminal or reboot your PC. It's permanent.
This is a one-liner. It adds a line to the .bashrc. That line is going to check if the directory has already been added to the path and append if not. This will prevent duplicating your directory in the path every time you source .bashrc.
echo "[[ \":\$PATH:\" != *\":$(pwd)/path/to/add:\"* ]] && export PATH=\"\${PATH:+\${PATH}}:$(pwd)/path/to/add\"" >> ~/.bashrc
source ~/.bashrc
I think the most elegant way is:
Add this in the ~./bashrc file:
if [ -d "new-path" ]; then
PATH=$PATH:new-path
fi
source *~/.bashrc*
(Ubuntu)
For a Debian distribution, you have to:
edit file ~/.bashrc. E.g: vim ~/.bashrc
add export PATH=$PATH:/path/to/dir
then restart your computer. Be aware that if you edit file ~/.bashrc as root, your environment variable you added will work only for root
I created a.bash_profile and defined
export PATH=/user/local/bin
rather than
export PATH=/user/local/bin:$PATH
Then, I ran
source ~/.bash_profile
Now none of the command, e.g., ls works. Is there a way to back out this change? Thank you.
If you have fixed your .bash_profile file, you just restart bash to get your $PATH back. If that's not an option, or you can't fix the file externally, you can do export PATH="/bin:/usr/bin:/usr/local/bin", which should give you enough to get to vi or some other text editor so you can fix your .bash_profile, then you can restart bash.
So I'm installing some things for coding and personal usage, and I need to run this in the terminal (I'm on Mac if you didn't read the title).
~/.bash_profile
It just says permission denied, Im running OSX 10.8.4 Mountain Lion. How do I bypass this?
On MacOS: add source ~/.bash_profile to the end of ~/.zshrc.
Then this profile will be in effect when you open zsh.
You would never want to run that, but you may want to source it.
. ~/.bash_profile
source ~/.bash_profile
both should work. But this is an odd request, because that file should be sourced automatically when you start bash, unless you're explicitly starting it non-interactively. From the man page:
When bash is invoked as an interactive login shell, or as a non-interactive shell with the --login option, it first reads and executes commands from the file /etc/profile, if that file exists. After reading that file, it looks for ~/.bash_profile, ~/.bash_login, and ~/.profile, in that order, and reads and executes commands from the first one that exists and is readable. The --noprofile option may be used when the shell is started to inhibit this behavior.
If you change .bash_profile, it only applies to new Terminal sessions.
To apply it to an existing session, run source ~/.bash_profile. You can run any Bash script this way - think of executing source as the same as typing commands in the Terminal window (from the specified script).
More info: How to reload .bash_profile from the command line?
Bonus: You can make environment variables available to OSX applications - not just the current Bash session but apps like Visual Studio Code or IntelliJ - using launchctl setenv GOPATH "${GOPATH:-}"
As #kojiro said, you don't want to "run" this file. Source it as he says. It should get "sourced" at startup. Sourcing just means running every line in the file, including the one you want to get run. If you want to make sure a folder is in a certain path environment variable (as it seems you want from one of your comments on another solution), execute
$ echo $PATH
At the command line. If you want to check that your ~/.bash_profile is being sourced, either at startup as it should be, or when you source it manually, enter the following line into your ~/.bash_profile file:
$ echo "Hello I'm running stuff in the ~/.bash_profile!"
No need to start, it would automatically executed while you startup your mac terminal / bash. Whenever you do a change, you may need to restart the terminal.
~ is the default path for .bash_profile
I was getting this error on zsh(mac os Big Sur 11.3), This is how i solved this :-
Go to Terminal.
cd /users/<yourusername>
Once you reach here issue a command :
ls -al
You will see a lot of files and one specific file .zprofile. This is your user profile. We need to edit this.
After this we need to edit the file. Issue the below command :
nano .zprofile
Once you issue this command file will be opened for edit. Add the path details for maven.
M2_PATH="/Users//code/apache-maven-3.8.1/bin" //add your path of maven diretory
PATH="${PATH}:${M2_PATH}"
export PATH
press ctrl + X and save the file.
Issue command after saving the file :
source .zprofile
Once done, you will be able to run the mvn command.
If the problem is that you are not seeing your changes to the file take effect, just open a new terminal window, and it will be "sourced". You will be able to use the proper PATH etc with each subsequent terminal window.