I'm trying to execute a spark program in cluster mode in Amazon Ec2 using
spark-submit --master spark://<master-ip>:7077 --deploy-mode cluster --class com.mycompany.SimpleApp ./spark.jar
And the class has a line that tries to read a file:
JavaRDD<String> logData = sc.textFile("/user/input/CHANGES.txt").cache();
I'm unable to read this txt file in cluster mode even if I'm able to read in standalone mode. In cluster mode, it's looking to read from hdfs. So I put the file in hdfs at /root/persistent-hdfs using
hadoop fs -mkdir -p /wordcount/input
hadoop fs -put /app/hadoop/tmp/input.txt /wordcount/input/input.txt
And I can see the file using hadoop fs -ls /workcount/input. But Spark is still unable to read the file. Any idea what I'm doing wrong. Thanks.
You might want to check the following points:
Is the file really in the persistent HDFS?
It seems that you just copy the input file from /app/hadoop/tmp/input.txt to /wordcount/input/input.txt, all in the node disk. I believe you misunderstand the functionality of the hadoop commands.
Instead, you should try putting the file explicitly in the persistent HDFS (root/persistent-hdfs/), and then loading it using the hdfs://... prefix.
Is the persistent HDFS server up?
Please take a look here, it seems Spark only starts the ephemeral HDFS server by default. In order to switch to the persistent HDFS server, you must do the following:
1) Stop the ephemeral HDFS server: /root/ephemeral-hdfs/bin/stop-dfs.sh
2) Start the persistent HDFS server: /root/persistent-hdfs/bin/start-dfs.sh
Please try these things, I hope they can serve you well.
Related
May I know how to execute HDFS copy commands on DataProc cluster using airflow.
After the cluster is created using airflow, I have to copy few jar files from Google storage to the HDFS master node folder.
You can execute hdfs commands on dataproc cluster using something like this
gcloud dataproc jobs submit hdfs 'ls /hdfs/path/' --cluster=my-cluster --
region=europe-west1
The easiest way is [1] via
gcloud dataproc jobs submit pig --execute 'fs -ls /'
or otherwise [2] as a catch-all for other shell commands.
For a single small file
You can copy a single file from Google Cloud Storage (GCS) to HDFS using the hdfs copy command. Note that you need to run this from a node within the cluster:
hdfs dfs -cp gs://<bucket>/<object> <hdfs path>
This works because
hdfs://<master node>
is the default filesystem. You can explicitly specify the scheme and NameNode if desired:
hdfs dfs -cp gs://<bucket>/<object> hdfs://<master node>/<hdfs path>
For a large file or large directory of files
When you use hdfs dfs, data is piped through your local machine. If you have a large dataset to copy, you will likely want to do this in parallel on the cluster using DistCp:
hadoop distcp gs://<bucket>/<directory> <HDFS target directory>
Consider [3] for details.
[1] https://pig.apache.org/docs/latest/cmds.html#fs
[2] https://pig.apache.org/docs/latest/cmds.html#sh
[3] https://hadoop.apache.org/docs/current/hadoop-distcp/DistCp.html
I am not sure about your use case to do this via airflow because if its onetime setup then i think we can run commands directly on dataproc cluster. But found some links which might be of some help. As i understand we can use BashOperator and can run commands.
https://big-data-demystified.ninja/2019/11/04/how-to-ssh-to-a-remote-gcp-machine-and-run-a-command-via-airflow/
Airflow Dataproc operator to run shell scripts
I was learning hadoop and till now I configured 3 Node cluster
127.0.0.1 localhost
10.0.1.1 hadoop-namenode
10.0.1.2 hadoop-datanode-2
10.0.1.3 hadoop-datanode-3
My hadoop Namenode directory looks like below
hadoop
bin
data-> ./namenode ./datanode
etc
logs
sbin
--
--
As I learned that when we upload a large file in the cluster in divide the file into blocks, I want to upload a 1Gig file in my cluster and want to see how it is being stored in datanode.
Can anyone help me with the commands to upload file and see where these blocks are being stored.
First, you need to check if you have Hadoop tools in your path, if not - I recommend integrate them into it.
One of the possible ways of uploading a file to HDFS:hadoop fs -put /path/to/localfile /path/in/hdfs
I would suggest you read the documentation and get familiar with high-level commands first as it will save you time
Hadoop Documentation
Start with "dfs" command, as this one of the most often used commands
Hello I am trying to copy a file in my S3 bucket into HDFS using the cp command.
I do something like
Hadoop --config config fs -cp s3a://path hadooppath
This works well when my config is in my local.
However now I am trying to set it up as an oozie job. So when I am now unable to pass the configuration files present in config directory in my local system. Even if its in HDFS, then still it doesn't seem to work. Any suggestions ?
I tried -D command in Hadoop and passed name and value pairs, still it throws some error. It works only from my local system.
Did you Try DISTCP in oozie? Hadoop 2.7.2 will supports S3 data source. You can able to schedule it by coordinators. Just parse the credentials to coordinators either RESTAPI or in Properties files. Its easy way to copy a data periodically(Scheduled manner).
${HADOOP_HOME}/bin/hadoop distcp s3://<source>/ hdfs://<destination>/
I am trying to copy data from one HDFS to another HDFS. Any suggestion why 1st one works but not 2nd one?
(works)
hadoop distcp hdfs://abc.net:8020/foo/bar webhdfs://def.net:14000/bar/foo
(does not work )
hadoop distcp webhdfs://abc.net:50070/foo/bar webhdfs://def:14000/bar/foo
Thanks!
If the two cluster are running incompatible version of HDFS, then
you can use the webhdfsprotocol to distcp between them.
hadoop distcp webhdfs://namenode1:50070/source/dir webhdfs://namenode2:50070/destination/dir
NameNode URI and NameNode HTTP port should be provided in the source and destination command, if you are using webhdfs.
I want to copy/upload some files from a local system (a system not in Hadoop cluster) onto Hadoop HDFS. The local system can be Windows system too.
I tried with Flume spool directory. It works fine with Text files. For other docs, the mime type is getting corrupted.
Please let me know different approaches to load a file(s) to HDFS.
hadoop fs -copyFromLocal <localsrc> URI
Check Hadoop documentation: copyFromLocal
Keep in mind, Apache Flume wasn't created to copy some files.
You can also use hadoop fs -put <localsrcpath> <hdfspath>
This is one of the alternative to copyFromLocal
In hadoop 2.0 (YARN) you can do as follows to transfer local files to HDFS:
hdfs dfs -put "localsrcpath" "hdfspath"
where hdfs is the command located in the bin directory.
Java code can do that easily. You don't require any tools for this. Check below, the piece of code that worked:
Configuration conf = new Configuration();
try {
conf.set("fs.defaultFS",<<namenode>>); //something like hdfs://server:9000 or copy from core-site.xml
FileSystem fileSystem= FileSystem.get(conf);
System.out.println("Uploading please wait...");
fileSystem.copyFromLocalFile(false, new Path(args[0]), new Path(args[1].trim()));//args[0]=C://file or dir args[1]=/imported
Prepare jar out of this and run on any OS. Keep in mind you no need to
have Hadoop running in the machine, where you are going to run this
code. If you need any help, add comments.
Don't forget to add dnsresolver line where you run this code. Open /drivers/etc/hosts (for Windows)
hadoopnamenode ip-address
slavenode ip-address
First you need to load docs from your Windows machine to linux machine using filezilla or other tool.
And then you need to use:
hadoop fs -put localsrcpath hdfspath
Following command will also work.
hadoop fs -copyFromLocal localsrcpath hdfspath