I have a 5 node hadoop cluster running HDP 2.3.0. I setup a H2O cluster on Yarn as described here.
On running following command
hadoop jar h2odriver_hdp2.2.jar water.hadoop.h2odriver -libjars ../h2o.jar -mapperXmx 512m -nodes 3 -output /user/hdfs/H2OTestClusterOutput
I get the following ouput
H2O cluster (3 nodes) is up
(Note: Use the -disown option to exit the driver after cluster formation)
(Press Ctrl-C to kill the cluster)
Blocking until the H2O cluster shuts down...
When I try to execute the command
h2o.init(ip="10.113.57.98", port=54321)
The process remains stuck at this stage.On trying to connect to the web UI using the ip:54321, the browser tries to endlessly load the H2O admin page but nothing ever displays.
On forcefully terminating the init process I get the following error
No instance found at ip and port: 10.113.57.98:54321. Trying to start local jar...
However if I try and use H2O with python without setting up a H2O cluster, everything runs fine.
I executed all commands as the root user. Root user has permissions to read and write from the /user/hdfs hdfs directory.
I'm not sure if this is a permissions error or that the port is not accessible.
Any help would be greatly appreciated.
It looks like you are using H2O2 (H2O Classic). I recommend upgrading your H2O to the latest (H2O 3). There is a build specifically for HDP2.3 here: http://www.h2o.ai/download/h2o/hadoop
Running H2O3 is a little cleaner too:
hadoop jar h2odriver.jar -nodes 1 -mapperXmx 6g -output hdfsOutputDirName
Also, 512mb per node is tiny - what is your use case? I would give the nodes some more memory.
Related
I have set up a Hadoop single node cluster with pseudo distributed operations, and YARN running. I am able to use Spark JAVA API to run queries as a YARN-client. I wanted to go one step further and try Apache Drill on this "cluster". I installed Zookeeper that is running smoothly but I am not able to start drill and I get this log:
nohup: ignoring input
Error: Could not find or load main class
org.apache.drill.exec.server.Drillbit
Any idea?
I am on Windows 10 with JDK 1.8.
DRILL CLASSPATH is not initialized in the process of running drillbit on your machine.
For the purpose to start Drill on Windows machine it is necessary to run sqlline.bat script, for example:
C:\bin\sqlline sqlline.bat –u "jdbc:drill:zk=local;schema=dfs"
See more info: https://drill.apache.org/docs/starting-drill-on-windows/
I have a spark cluster launched using spark-ec2 script.
(EDIT: after login into the master), I can run spark jobs locally on the master node as :
spark-submit --class myApp --master local myApp.jar
But I can't seem to run the job in the cluster mode:
../spark/bin/spark-submit --class myApp --master spark://54.111.111.111:7077 --deploy-mode cluster myApp.jar
The ip address of the master is obtained from the AWS console.
I get the following errors:
WARN RestSubmissionClient: Unable to connect to server
Warning: Master endpoint spark://54.111.111.111:7077 was not a REST server. Falling back to legacy submission gateway instead.
Error connecting to master (akka.tcp://sparkMaster#54.111.111.111:7077).
Cause was: akka.remote.InvalidAssociation: Invalid address: akka.tcp://sparkMaster#54.177.156.236:7077
No master is available, exiting.
How to submit to a EC2 spark cluster ?
When you run with --master local you are also not connecting to the master. You are executing Spark operations in the same JVM as the application. (See docs.)
Your application code may be wrong too. So first just try to run spark-shell on the master node. /root/spark/bin/spark-shell is configured to connect to the EC2 Spark master when started without flags. If that works, you can try spark-shell --master spark://ec2-xxx-xxx-xxx-xxx.compute-1.amazonaws.com:7077 on your laptop. Be sure to use the external IP or hostname of the master machine.
If that works too, try running your application in client mode (without --deploy-mode cluster). Hopefully in the course of trying all these, you will figure out what was wrong with your original approach. Good luck!
This is nothing to do with EC2, I had similar error on my server. I was able to resolve it by overwriting spark-env.sh SPARK_MASTER_IP.
I setup percona_xtradb_cluster-56 with three nodes in the cluster. To start the first cluster, i use the following command and it starts just fine:
#/etc/init.d/mysql bootstrap-pxc
The other two nodes however fail to start when i start them normally using the command:
#/etc/init.d/mysql start
The error i am getting is "The server quit without updating the PID file". The error log contains this message:
Error in my_thread_global_end(): 1 threads didn't exit 150605 22:10:29
mysqld_safe mysqld from pid file /var/run/mysqld/mysqld.pid ended.
The cluster nodes are running all Ubuntu 14.04. When i use percona-xtradb-cluster5.5, the cluster ann all the nodes run just fine as expected. But i need to use version 5.6 because i am also using GTID which is only available in version 5.6 and not supported in earlier versions.
I was following these two percona documentation to setup the cluster:
https://www.percona.com/doc/percona-xtradb-cluster/5.6/installation.html#installation
https://www.percona.com/doc/percona-xtradb-cluster/5.6/howtos/ubuntu_howto.html
Any insight or suggestions on how to resolve this issue would be highly appreciated.
The problem is related to memory, as "The Georgia" writes. There should be at least 500MB for default setup and bootstrapping. See here http://sysadm.pp.ua/linux/px-cluster.html
I am new to the spark, After installing the spark using parcels available in the cloudera manager.
I have configured the files as shown in the below link from cloudera enterprise:
http://www.cloudera.com/content/cloudera-content/cloudera-docs/CM4Ent/4.8.1/Cloudera-Manager-Installation-Guide/cmig_spark_installation_standalone.html
After this setup, I have started all the nodes in the spark by running /opt/cloudera/parcels/SPARK/lib/spark/sbin/start-all.sh. But I couldn't run the worker nodes as I got the specified error below.
[root#localhost sbin]# sh start-all.sh
org.apache.spark.deploy.master.Master running as process 32405. Stop it first.
root#localhost.localdomain's password:
localhost.localdomain: starting org.apache.spark.deploy.worker.Worker, logging to /var/log/spark/spark-root-org.apache.spark.deploy.worker.Worker-1-localhost.localdomain.out
localhost.localdomain: failed to launch org.apache.spark.deploy.worker.Worker:
localhost.localdomain: at java.lang.ClassLoader.loadClass(libgcj.so.10)
localhost.localdomain: at gnu.java.lang.MainThread.run(libgcj.so.10)
localhost.localdomain: full log in /var/log/spark/spark-root-org.apache.spark.deploy.worker.Worker-1-localhost.localdomain.out
localhost.localdomain:starting org.apac
When I run jps command, I got:
23367 Jps
28053 QuorumPeerMain
28218 SecondaryNameNode
32405 Master
28148 DataNode
7852 Main
28159 NameNode
I couldn't run the worker node properly. Actually I thought to install a standalone spark where the master and worker work on a single machine. In slaves file of spark directory, I given the address as "localhost.localdomin" which is my host name. I am not aware of this settings file. Please any one cloud help me out with this installation process. Actually I couldn't run the worker nodes. But I can start the master node.
Thanks & Regards,
bips
Please notice error info below:
localhost.localdomain: at java.lang.ClassLoader.loadClass(libgcj.so.10)
I met the same error when I installed and started Spark master/workers on CentOS 6.2 x86_64 after making sure that libgcj.x86_64 and libgcj.i686 had been installed on my server, finally I solved it. Below is my solution, wish it can help you.
It seem as if your JAVA_HOME environment parameter didn't set correctly.
Maybe, your JAVA_HOME links to system embedded java, e.g. java version "1.5.0".
Spark needs java version >= 1.6.0. If you are using java 1.5.0 to start Spark, you will see this error info.
Try to export JAVA_HOME="your java home path", then start Spark again.
I'm deploying Hadoop CDH3 in pseudo-distributed mode on a VPS.
So i have installed CDH3, then i have executed
sudo apt-get install hadoop-0.20-conf-pseudo
but if i try to start all daemons with
for service in /etc/init.d/hadoop-0.20-*; do sudo $service start; done
it throws
ERROR. Could not start Hadoop datanode daemon
The same installation and starting commands works on my notebook.
I don't understand the cause. In fact the log file is empty. The available RAM is about 900MB, with 98G of available disk space.
Which can be the cause or how can i discover it? I'm excluding that the error is from the configuration files.
Consider using Cloudera Manager, it could save you some time (especially if you use multiple nodes). There is a nice video on Youtube which shows deployment process