Building Mesos 1.3.0 from sources on linux-mint release 18.2 I get the following message:
configure: error: cannot find libz
When I try to search packages starts with libz* I get many packages names starting with libz. Which one is the right package I should install it?
Try installing zlib1g-dev. It's listed in the documentation
Linux Mint 18.2 is based on Ubuntu 16.04.
So, you should follow instructions for Ubuntu
16.04.
# Update the packages.
$ sudo apt-get update
# Install a few utility tools.
$ sudo apt-get install -y tar wget git
# Install the latest OpenJDK.
$ sudo apt-get install -y openjdk-8-jdk
# Install autotools (Only necessary if building from git repository).
$ sudo apt-get install -y autoconf libtool
# Install other Mesos dependencies.
$ sudo apt-get -y install build-essential python-dev python-six python-virtualenv libcurl4-nss-dev libsasl2-dev libsasl2-modules maven libapr1-dev libsvn-dev zlib1g-dev
Related
I have problems with R-studio installation for Ubuntu 16.04 32-bit. I found out a reason for my problem here - https://mikewilliamson.wordpress.com/2016/11/14/installing-r-studio-on-ubuntu-16-10/. But the script examples are for 64-bit machine and I don't quite understand how I can change them for my 32-bit machine.
Does somebody had the same problems? How did you solve it?
o Install R 3.4.1 and Rstudio on ubuntu 16.04 LTS on 32 bit machine :
Carry out following steps :
cd $HOME
wget https://cran.rstudio.com/src/base/R-3/R-3.4.1.tar.gz
tar xvf R-3.4.1.tar.gz
cd R-3.4.1
sudo apt-get install gcc fort77 aptitude
sudo aptitude install g++
sudo aptitude install xorg-dev
sudo aptitude install libreadline-dev
sudo aptitude install gfortran
gfortran --version
sudo apt install libpcre3-dev liblzma-dev libbz2-dev
sudo add-apt-repository ppa:webupd8team/java -y
sudo apt-get update
sudo apt-get install oracle-java8-installer
sudo apt-get install oracle-java8-set-default
sudo apt-get install texlive-base
sudo apt-get install texinfo
sudo apt-get install texlive-fonts-extra
sudo apt-get install libcurl4-openssl-dev
sudo apt-get install libcairo2-dev libpng-dev zlib1g-dev libpixman-1-dev libxt-dev
java -version
need to build shared library (--enable-R-shlib)
the --enable-R-shlib option is needed for the RStudio IDE to work
sudo ./configure --enable-R-shlib
sudo make
sudo make install
R --version
cd $HOME
rm R-3.4.1.tar.gz
sudo rm -rf R-3.4.1
Only one warning is shown during compilation:
main.c: In function ‘dummy_ii’:
main.c:1669:12: warning: function returns address of local variable [-Wreturn-local-addr]
return (uintptr_t) ⅈ
^
Now you can install Rstudio (here for a 32 bits system; choose the correct one for you here https://www.rstudio.com/products/rstudio/download/):
sudo apt-get install gdebi-core
wget https://download1.rstudio.org/rstudio-1.0.143-i386.deb
sudo gdebi -n rstudio-1.0.143-i386.deb
rm rstudio-1.0.143-i386.deb
To know if you have a 32-bits or 64-bits system, enter:
uname -a
The machine hardware name lists whether your system is 32-bit (“i686” or “i386”) or 64-bit (“x86_64”).
For further details refer the link :
https://biostatsr.blogspot.in/2017/06/install-r-340-and-rstudio-on-ubuntu.html
It seems current versions of RStudio in Ubuntu 16.04 are not supported for 32-bit. So I enabled i386 architecture (https://blog.teststation.org/ubuntu/2016/05/12/installing-32-bit-software-on-ubuntu-16.04/) in order to install previous Ubuntu 32-bit versions.
sudo dpkg --add-architecture i386
sudo apt-get update
sudo apt-get install libc6:i386 libstdc++6:i386
Then I was able to install RStudio 1.1.442 - Ubuntu 12.04-15.10/Debian 8 (32-bit) (https://download1.rstudio.org/rstudio-1.1.442-i386.deb). It worked for my Xubuntu 16.04 (32-bit)
(py36venv) vagrant#pvagrant-dev-vm:/vagrant/venvs$ pip3 install pep8
pip is configured with locations that require TLS/SSL, however the ssl module in Python is not available.
Collecting pep8 Could not fetch URL
https://pypi.python.org/simple/pep8/: There was a problem confirming
the ssl certificate: Can't connect to HTTPS URL because the SSL module
is not available. - skipping
Could not find a version that satisfies the requirement pep8 (from
versions: ) No matching distribution found for pep8
Background information - Trying to move to python 3.6.
Installed python3.6 using the below commands:
wget https://www.python.org/ftp/python/3.6.0/Python-3.6.0.tgz
tar -xvf Python-3.6.0.tgz
cd Python-3.6.0
./configure --enable-optimizations
make -j8 sudo
make altinstall python3.6
Created virtualenv by:
python3.6 -m venv py36venv
source py36venv/bin/activate
Tried to install pep8
(py36venv) pip3 install pep8
pip is configured with locations that require TLS/SSL, however the ssl
module in Python is not available.
Collecting pep8
Could not fetch URL https://pypi.python.org/simple/pep8/: There was a problem
confirming the ssl certificate: Can't connect to HTTPS URL because the
SSL module is not available. - skipping Could not find a version
that satisfies the requirement pep8 (from versions: ) No matching
distribution found for pep8
I followed the below steps for python3.6 installation in ubuntu 14.04 and virtualenv pip installs works fine.
Python 3.6 Installation:
sudo apt-get install python3-dev libffi-dev libssl-dev
wget https://www.python.org/ftp/python/3.6.0/Python-3.6.0.tgz
tar xvf Python-3.6.0.tgz
cd Python-3.6.0
./configure --enable-optimizations
make -j8
sudo make altinstall
python3.6
If seeing the following error --
zipimport.ZipImportError: can't decompress data; zlib not available
make: *** [altinstall] Error 1
try:
sudo apt-get install zlib1g-dev
Validation:
Create virtualenv in python3.6:
python3.6 -m venv testenv
source testenv/bin/activate
pip install pep8
using pip:
(testenv) vagrant#pvagrant-dev-vm:~$ pip install pep8
*Collecting pep8
Downloading pep8-1.7.0-py2.py3-none-any.whl (41kB)
100% |████████████████████████████████| 51kB 4.1MB/s
Installing collected packages: pep8
Successfully installed pep8-1.7.0*
(testenv) vagrant#pvagrant-dev-vm:~$ pip list
pep8 (1.7.0)
pip (9.0.1)
setuptools (28.8.0)
I stumbled upon the same issue when I tried to create a virtual environment utilising python3.6.0. Here is my solution for Mac OS X 10.12.2 (Py_minion comment was pretty close):
Setup
I created the environment by the following steps:
downloading python3.6.0
running
./configure --prefix=<some_path>`
make
make install
mkvirtualenv --python=<some_path/bin/python3.6> foo
So basically similar to: https://stackoverflow.com/a/11301911/1286093
An indication if you have the same issue as I had would be a similar line when running make
The necessary bits to build these optional modules were not found: _ssl
Solution
Install openssl
brew install openssl
brew unlink openssl && brew link openssl --force
Change Module/Setup or Module/Setup.dist
You can find those files in the directory of the downloaded Python version.
Comment in and, if necessary change, lines 209 - 211 (I had to change the SSL variable to my openssl location).
SSL=/usr/local/opt/openssl <---- THIS DEPENDS ON YOUR INSTALLATION
_ssl _ssl.c \
-DUSE_SSL -I$(SSL)/include -I$(SSL)/include/openssl \
-L$(SSL)/lib -lssl -lcrypto
Given that this was the location of openssl
Set environment variables
export CFLAGS="-I$(brew --prefix openssl)/include"
export LDFLAGS="-L$(brew --prefix openssl)/lib"
make and install again
Running
./configure --prefix=<some_path>`
make
make install
mkvirtualenv --python=<some_path/bin/python3.6> foo
again did the trick for me
Running make reported to me in the shell output:
The necessary bits to build these optional modules were not found:
_bz2 _dbm _gdbm
_sqlite3 _ssl _tkinter
To find the necessary bits, look in setup.py in detect_modules() for the module's name.
What solved the problem in my case (Linux Mint 18.1, openssl already installed) was editing the setup.py in the Python-3.6.0 folder adding there the path to where the openssl installation put the ssl.h file on my system into ( /usr/include/openssl/ssl.h ). Here the section in which I have added the line '/usr/include':
# Detect SSL support for the socket module (via _ssl)
search_for_ssl_incs_in = [
'/usr/local/ssl/include/',
'/usr/contrib/ssl/include/',
'/usr/include/'
]
ssl_incs = find_file('openssl/ssl.h', inc_dirs,
search_for_ssl_incs_in
)
I have solved this problem on Ubuntu-16.04.1.
First you need to install necessary libraries. To install open Terminal (Ctrl+Alt+T), then type;
sudo apt-get install build-essential checkinstall
sudo apt-get install libreadline-gplv2-dev libncursesw5-dev libssl-dev libsqlite3-dev tk-dev libgdbm-dev libc6-dev libbz2-dev
After that go the directory where your python file is then reconfigure and reinstall python3.6 .
cd /opt/Python3.6/
./configure
make
sudo make install
NOTE
If you installed Python3.6 via ppa, then reinstall it again;
sudo apt-get install python3.6
Now you should be able to use pip3.6
I ran into the same error when building Python 3.6.1 from source under CentOS 7.
For CentOS7, I had to first:
sudo yum install openssl-dev
Then:
./configure --enable-optimizations
make altinstall
Now pip3.6 works :-)
A complete script can be found HERE
Install Prerequisites
For RHEL/CentOS
sudo yum -y install gcc gcc-c++ zlib zlib-devel libffi-devel openssl-devel wget
For Ubuntu/Debian
sudo apt-get -y install build-essential python-dev python-setuptools python-pip
python-smbus libncursesw5-dev libgdbm-dev libc6-dev zlib1g-dev libsqlite3-dev
tk-dev libssl-dev openssl libffi-dev wget
Download Python
Modify for the version of python you want
Python Versions
cd /var/tmp
sudo wget https://www.python.org/ftp/python/3.x.x/Python-x.x.x.tgz
sudo tar xf Python-3.*.tgz
cd Python-3*
Configure/Make/Install
sudo ./configure --enable-optimizations --enable-shared --prefix=/usr/local
sudo make && make altinstall
Cleanup Shared Library & Add to Path
Stripping the shared library of debugging symbols can speed up execution when running parallel scripts.
sudo make && make altinstall
sudo strip /usr/local/lib/libpython3.7m.so.1.0
sudo echo 'export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:/usr/local/lib' >> /etc/profile.d/python.sh
sudo echo 'export PATH=${PATH}:~/usr/local/bin/' >> /etc/profile.d/python.sh
sudo echo '/usr/local/lib' >> /etc/ld.so.conf
sudo ldconfig
Reference
Gist
Stack Overflow
Stack Overflow
Daniel Erikson
Unix StackExchange
TLDP
The steps I've taken are below. During the ./configure step, unless I allow the system default for the cuDNN version (v5) instead of specifying v5.1.5 (as I want), I get an error saying that the environment version (v5) for cuDNN doesn't match the target version (5.1.5). Since I have downloaded the cuDNN v5.1.5 file for CUDA 8.0 from Nvidia I'm baffled.
What's more, after digging through https://github.com/tensorflow/tensorflow/blob/master/third_party/gpus/cuda_configure.bzl around line 240, I'm seeing that the version the bazel configure script checks against seems to only take into account the Major numeral of the cuDNN version (my Major, Minor and Patch numerals within cudnn.h are 5, 1, 5 respectively). So, I'm uncertain as to how it would ever allow version 5.1.5 to be installed. Maybe I'm looking at it wrong?
In any case, does anyone have a method of installing cuDNN 5.1.5 with CUDA 8.0 and Tensorflow 0.12 on a g2.2xlarge instance?
Thanks!
Steps
(Note: these work, but it installs cuDNN 5.0, not 5.1.5 as desired)
Provisioning
follow provisioning steps from: https://medium.com/#giltamari/tensorflow-getting-started-gpu-installation-on-ec2-9b9915d95d6f#.2hv67eeek
(i.e. up to but not including: sudo apt-get update && sudo apt-get -y upgrade)
Installing dependencies and tools
familiarize self with:
http://expressionflow.com/2016/10/09/installing-tensorflow-on-an-aws-ec2-p2-gpu-instance/
http://ramhiser.com/2016/01/05/installing-tensorflow-on-an-aws-ec2-instance-with-gpu-support/
https://alliseesolutions.wordpress.com/2016/09/08/install-gpu-tensorflow-from-sources-w-ubuntu-16-04-and-cuda-8-0-rc/
sudo apt-get update
sudo apt-get upgrade
sudo apt-get install -y build-essential git python-pip libfreetype6-dev libxft-dev libncurses-dev libopenblas-dev gfortran python-matplotlib libblas-dev liblapack-dev libatlas-base-dev python-dev python-pydot linux-headers-generic linux-image-extra-virtual unzip python-numpy swig python-pandas python-sklearn unzip wget pkg-config zip g++ zlib1g-dev libcurl3-dev
sudo pip install -U pip
Installing Cuda 8
wget https://developer.nvidia.com/compute/cuda/8.0/prod/local_installers/cuda-repo-ubuntu1604-8-0-local_8.0.44-1_amd64-deb
sudo dpkg -i cuda-repo-ubuntu1604-8-0-local_8.0.44-1_amd64-deb
rm cuda-repo-ubuntu1604-8-0-local_8.0.44-1_amd64-deb
sudo apt-get update
sudo apt-get install -y cuda
Installing cuDNN
We want to download and install latest version of cuDNN. Downloading cuDNN requires logging into NVIDIA developer site, so we can’t use wget to fetch the files. Download the following files from NVIDIA and upload them to your AWS instance.
download cuDNN 5.1 for CUDA 8.0 on linux
scp -i ssh-key.pem path/to/downloaded/cudnn ubuntu#ec2{instance}.us-west-1.compute.amazonaws.com:~/
sudo tar -xzvf cudnn-8.0-linux-x64-v5.1.tgz
sudo cp cuda/include/cudnn.h /usr/local/cuda/include
sudo cp cuda/lib64/libcudnn* /usr/local/cuda/lib64
sudo chmod a+r /usr/local/cuda/include/cudnn.h /usr/local/cuda/lib64/libcudnn*
Configure the Environment
put following at end of ~/.bashrc:
export CUDA_HOME=/usr/local/cuda
export CUDA_ROOT=/usr/local/cuda
export PATH=$PATH:$CUDA_ROOT/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$CUDA_ROOT/lib64:$CUDA_ROOT/extras/CUPTI/lib64
source ~/.bashrc
sudo reboot
Installing Bazel
sudo add-apt-repository -y ppa:webupd8team/java
sudo apt-get update
echo debconf shared/accepted-oracle-license-v1-1 select true | sudo debconf- set-selections
echo debconf shared/accepted-oracle-license-v1-1 seen true | sudo debconf- set-selections
sudo apt-get install -y oracle-java8-installer
sudo apt-get install pkg-config zip g++ zlib1g-dev
scp https://github.com/bazelbuild/bazel/releases/download/0.3.2/bazel-0.3.2-installer-linux-x86_64.sh from local machine to ec2 instance
chmod +x bazel-0.1.4-installer-linux-x86_64.sh
./bazel-0.1.4-installer-linux-x86_64.sh --user
rm bazel-0.1.4-installer-linux-x86_64.sh
bazel version
Building and Installing Tensorflow
git clone --recurse-submodules https://github.com/tensorflow/tensorflow
cd tensorflow
TF_UNOFFICIAL_SETTING=1 ./configure
hit enter/default for all except:
CUDA version = 8.0, CUDA dependency = 3.0 (k520 gpu)
bazel build -c opt --config=cuda //tensorflow/cc:tutorials_example_trainer
bazel-bin/tensorflow/tools/pip_package/build_pip_package /tmp/tensorflow_pkg
sudo pip install --upgrade /tmp/tensorflow_pkg/tensorflow-0.12.0rc1-cp27-cp27mu-linux_x86_64.whl
I was installing Sass on ubuntu for that I first installed Ruby and then Sass. but when i tried sass -v it gave a deprecated message about currently install ruby1.9 version saying it will not be support in future. so i tried upgrading ruby version to 2.0 (2.3 is not being installed on ubuntu) using
$ sudo apt-get install ruby2.0
But when checking the ruby version it still showed 1.9 so i tried with UN-installing Ruby1.9 then it showed a dependent library to uninstalled. I even did that but after that on installing ruby 2.0 again it gives error
the following packages have unmet dependencies:
libantlr3c-antlrdbg-3.2-0 : Conflicts: libantlr3c-3.2-0
E: Unable to correct problems, you have held broken packages.
How to solve this??
Basically you should install it directly from source, like so:
sudo apt-get -y update
sudo apt-get -y install build-essential zlib1g-dev libssl-dev
libreadline6-dev libyaml-dev
cd /tmp
wget http://ftp.ruby-lang.org/pub/ruby/2.0/ruby-2.0.0-p451.tar.gz
tar -xvzf ruby-2.0.0-p451.tar.gz
cd ruby-2.0.0-p451/
./configure --prefix=/usr/local
make
sudo make install
Solution found here.
I am using Ubuntu 15.04, I am trying to install Oracle 11G.
before installing the Oracle I have install all the package mention bellow.
sudo apt-get install libaio1
sudo apt-get install libaio-dev
sudo apt-get install unixODBC
sudo apt-get install unixODBC-dev
sudo apt-get install expat
sudo apt-get install sysstat
sudo apt-get install libelf-dev
sudo apt-get install elfutils
sudo apt-get install lsb-cxx
sudo apt-get install pdksh
sudo apt-get install libstdc++5
sudo apt-get install ia32-libs
sudo apt-get install ksh
sudo apt-get install lesstif2
sudo apt-get install alien
sudo apt-get install gcc
sudo apt-get install gawk
sudo apt-get install binutils
sudo apt-get install gawk
sudo apt-get install x11-utils
sudo apt-get install rpm
sudo apt-get install alien
sudo apt-get install lsb-rpm
sudo apt-get install libmotif3
sudo apt-get install lesstif2
sudo apt-get install openssh-server
While installing Oracle I am getting this error
LOG Errors
INFO: /usr/bin/ld: cannot find -lclntsh
/usr/bin/ld: cannot find /usr/lib64/libpthread_nonshared.a inside
INFO: collect2: error: ld returned 1 exit status
INFO: /home/varun/app/varun/product/11.2.0/dbhome_1/plsql/lib/ins_plsql.mk:33: recipe for target 'wrap' failed
INFO: make: *** [wrap] Error 1
INFO: End output from spawned process.
INFO: ----------------------------------
INFO: Exception thrown from action: make
Exception Name: MakefileException
Exception String: Error in invoking target 'install' of makefile '/home/varun/app/varun/product/11.2.0/dbhome_1/plsql/lib/ins_plsql.mk'. See '/home/varun/app/oraInventory/logs/installActions2015-08-27_11-31-03PM.log' for details.
Exception Severity: 1
I really dont have idea how do I resolve this. Searched lot on the net but could not find solution. Does any body have idea how do I FIXED IT
This is an unsupported linux release for oracle 11g. You are pretty much on your own to get this to work. Otherwise check the oracle linux installation guide for supported linux versions and distributions (they are generally redhat based).