RPM compression not working with spring-boot gradle - spring

Question

Ive made a spring boot project with gradle, and have made an rpm build for it. The jar file works fine before i run my rpm, but after its compressed i get this error:
Exception in thread "main" java.lang.IllegalStateException: Failed to get nested archive for entry BOOT-INF/lib/castor-core-1.3.3.jar
at org.springframework.boot.loader.archive.JarFileArchive.getNestedArchive(JarFileArchive.java:109)
at org.springframework.boot.loader.archive.JarFileArchive.getNestedArchives(JarFileArchive.java:87)
at org.springframework.boot.loader.ExecutableArchiveLauncher.getClassPathArchives(ExecutableArchiveLauncher.java:70)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:49)
at org.springframework.boot.loader.JarLauncher.main(JarLauncher.java:51)
Caused by: java.io.IOException: Unable to open nested jar file 'BOOT-INF/lib/castor-core-1.3.3.jar'
at org.springframework.boot.loader.jar.JarFile.getNestedJarFile(JarFile.java:253)
at org.springframework.boot.loader.jar.JarFile.getNestedJarFile(JarFile.java:238)
at org.springframework.boot.loader.archive.JarFileArchive.getNestedArchive(JarFileArchive.java:104)
... 4 more
Caused by: java.lang.IllegalStateException: Unable to open nested entry 'BOOT-INF/lib/castor-core-1.3.3.jar'. It has been compressed and nested jar files must be stored without compression. Please check the mechanism used to create your executable jar file
at org.springframework.boot.loader.jar.JarFile.createJarFileFromFileEntry(JarFile.java:281)
at org.springframework.boot.loader.jar.JarFile.createJarFileFromEntry(JarFile.java:261)
at org.springframework.boot.loader.jar.JarFile.getNestedJarFile(JarFile.java:249)
... 6 more
I have tried diabling rpms compression with %global __os_install_post %{nil} at the top of my .spec file, and then it works. So ive narrowed it down to my issue being that it is compressed when i build the rpm. However im not really interested in it not being compressed, as the file may eventually get rather large . So how do i actually fix this. Do i have to add something to gradle telling it to decompress before running or something?
rpm was build with this .sh file:
#!/bin/bash
# This script expects the Jenkins job to have moved the securityservice-files into the rpmbuild/SOURCES dir
echo ""
echo ""
echo ""
echo ""
echo ""
echo ""
echo ""
source common.sh
# Remove old RPMS, just for good measure
rm -rf rpmbuild/RPMS/*
# Move build files into SOURCES
cp ../sf_securityservice/build/libs/securityservice-0.0.1.jar rpmbuild/SOURCES
cp ../sf_securityservice/dist-resources/log4j2.xml rpmbuild/SOURCES
cp ../sf_securityservice/dist-resources/config.xml rpmbuild/SOURCES
#Define paths
BIN_DIR=$C3A_BIN_DIR/securityservice
ETC_DIR=$C3A_ETC_DIR/securityservice
LOG_DIR=$C3A_LOG_DIR/securityservice
VAR_DIR=$C3A_VAR_DIR/securityservice
JDK_VERSION_STRING=$(select_java_version "Frankfurt")
RELEASE=$(package_version)
VERSION="1.0"
#Set default args
cat <<DEFAULT_ARGS > rpmbuild/SOURCES/default_args
#
# Changes in this file WILL be replaced on update.
# Persistent changes goes in ${ETC_DIR}/custom_args.
#
JVM_ARGS="-Dlog4j.configurationFile=/opt/c3a/etc/securityservice/log4j2.xml"
CMD_ARGS="${ETC_DIR}/config.xml"
DEFAULT_ARGS
#Make empty file for custom args
touch rpmbuild/SOURCES/custom_args
cat <<RUNSH > rpmbuild/SOURCES/run.sh
#!/bin/bash
source $BIN_DIR/default_args
source $ETC_DIR/custom_args
/usr/bin/java \$JVM_ARGS -XX:OnOutOfMemoryError='kill -9 %p' -jar $BIN_DIR/securityservice-0.0.1.jar \$CMD_ARGS
RUNSH
cat <<EOF > rpmbuild/SOURCES/c3a-securityservice.service
[Unit]
Description=Cetrea SecurityService
After=syslog.target network.target
[Service]
Type=simple
WorkingDirectory=$VAR_DIR
User=securityservice
Group=c3a
Restart=always
StartLimitInterval=900
StartLimitBurst=3
RestartSec=10
ExecStart=$BIN_DIR/run.sh
SyslogIdentifier=cas
LimitNOFILE=25000
[Install]
WantedBy=multi-user.target
EOF
cd rpmbuild
rm -rf ./BUILDROOT/*
rpmbuild --target noarch \
-D "VERSION $VERSION" \
-D "RELEASE $RELEASE" \
-D "BIN_DIR $BIN_DIR" \
-D "ETC_DIR $ETC_DIR" \
-D "LOG_DIR $LOG_DIR" \
-D "VAR_DIR $VAR_DIR" \
-D "JDK_VERSION_STRING $JDK_VERSION_STRING" \
-D "_topdir ${PWD}" \
-bb SPECS/securityservice.spec
RPM=$DIR/rpmbuild/RPMS/noarch/securityservice-${VERSION}-${RELEASE}.noarch.rpm
echo $RPM
and this .spec
%description
this package contains Cetrea SecurityService.
%prep
#Unpack the release here using %setup
%build
#nothing here
%install
#Make target folders
mkdir -p $RPM_BUILD_ROOT%{LOG_DIR}
mkdir -p $RPM_BUILD_ROOT%{BIN_DIR}
mkdir -p $RPM_BUILD_ROOT%{ETC_DIR}
mkdir -p $RPM_BUILD_ROOT%{VAR_DIR}
mkdir -p $RPM_BUILD_ROOT/usr/lib/systemd/system/
cp $RPM_SOURCE_DIR/c3a-securityservice.service $RPM_BUILD_ROOT/usr/lib/systemd/system/
# Copy things into said folders
cp $RPM_SOURCE_DIR/default_args $RPM_BUILD_ROOT%{BIN_DIR}
cp $RPM_SOURCE_DIR/run.sh $RPM_BUILD_ROOT%{BIN_DIR}
cp $RPM_SOURCE_DIR/custom_args $RPM_BUILD_ROOT%{ETC_DIR}
cp $RPM_SOURCE_DIR/log4j2.xml $RPM_BUILD_ROOT%{ETC_DIR}
cp $RPM_SOURCE_DIR/config.xml $RPM_BUILD_ROOT%{ETC_DIR}
cp $RPM_SOURCE_DIR/securityservice.log $RPM_BUILD_ROOT%{VAR_DIR}
install -m 644 $RPM_SOURCE_DIR/securityservice-0.0.1.jar $RPM_BUILD_ROOT%{BIN_DIR}/
%pre
groupadd c3a || true
useradd -d %{VAR_DIR} -g c3a securityservice || true
%post
# Start the SecurityService once the install has completed
systemctl daemon-reload
if [ $1 -gt 1 ] ; then
echo "restart SecurityService"
systemctl restart c3a-securityservice || true
else
echo "start SecurityService"
systemctl enable c3a-securityservice || true
systemctl start c3a-securityservice || true
fi
%preun
# the preun section is where you can run commands before the rpm is removed
if [ $1 == 0 ] ; then
echo "stop SecurityService"
systemctl stop c3a-securityservice || true
systemctl disable c3a-securityservice || true
systemctl daemon-reload
systemctl reset-failed c3a-securityservice || true
fi
%clean
#rm -rf $RPM_BUILD_ROOT
#rm -rf %{_tmppath}/%{name}
#rm -rf %{_topdir}/BUILD/%{name}
%files
# list files owned by the package here
%attr(-, securityservice, c3a) %dir %{BIN_DIR}
%attr(-, securityservice, c3a) %dir %{LOG_DIR}
%attr(-, securityservice, c3a) %dir %{VAR_DIR}
%attr(644, securityservice, c3a) %{BIN_DIR}/securityservice-0.0.1.jar
%attr(-, securityservice, c3a) %{BIN_DIR}/default_args
%attr(750, securityservice, c3a) %{BIN_DIR}/run.sh
%attr(-,securityservice, c3a) %VAR_DIR/securityservice.log
%attr(664, securityservice, c3a) %config(noreplace) %{ETC_DIR}/*
/usr/lib/systemd/system/c3a-securityservice.service
%changelog
The gradle file:
buildscript {
ext {
springBootVersion = '2.0.0.RC2'
}
repositories {
mavenCentral()
maven { url "https://repo.spring.io/snapshot" }
maven { url "https://repo.spring.io/milestone" }
}
dependencies {
classpath("org.springframework.boot:spring-boot-gradle-plugin:${springBootVersion}")
}
}
apply plugin: 'java'
apply plugin: 'eclipse'
apply plugin: 'org.springframework.boot'
apply plugin: 'io.spring.dependency-management'
apply plugin: 'jacoco'
group = 'com.cetrea'
version = '0.0.1'
sourceCompatibility = 1.8
repositories {
mavenCentral()
maven { url "https://repo.spring.io/snapshot" }
maven { url "https://repo.spring.io/milestone" }
}
// Exclude springboots own logging framework as we want log4j2
configurations {
all*.exclude group: 'org.springframework.boot', module: 'spring-boot-starter-logging'
}
dependencies {
compile('org.springframework.boot:spring-boot-starter')
compile('org.springframework.boot:spring-boot-starter-web')
compile('org.springframework.boot:spring-boot-starter-security')
compile('org.springframework.boot:spring-boot-starter-log4j2')
compile('org.springframework:spring-oxm')
compile('org.codehaus.castor:castor-xml:1.3.3')
compile('org.apache.commons:commons-collections4:4.1')
testCompile('org.springframework.boot:spring-boot-starter-test')
testCompile('org.springframework.security:spring-security-test')
}
jacoco{
toolVersion = "0.7.9"
}
jacocoTestReport {
group = "reporting"
description = "generate Jacoco coverage reports after running tests."
additionalSourceDirs = files(sourceSets.main.allJava.srcDirs)
}
jar {
baseName = 'securityservice'
from { configurations.compile.collect { it.isDirectory() ? it : zipTree(it) } }
manifest {
attributes 'Main-Class': 'com.cetrea.securityservice.SecurityService'
}
}
Is this a gradle problem or an rpm problem?