How to calculate the throughput usage of AWS EBS volume - performance

We have a hadoop cluster running on AWS EC2 instances.
Configured 16T st1 volume in datanodes for HDFS usage.
We need to understand, what is the maximum throughput we are hitting on this st1 volumes.
Since CloudWatch is covering data on 5 mins interval, the values are being averaged out and cannot be trusted.
I came to know that 'iostat -txm 1' can be used to get the real time usage and make out current throughput. But i am failed to understand how to calculate throughput from this result.
Can some one help here to calculate the throughput using iostat ?

Related

High CPU usage on elasticsearch nodes

we have been using a 3 node Elasticsearch(7.6v) cluster running in docker container. I have been experiencing very high cpu usage on 2 nodes(97%) and moderate CPU load on the other node(55%). Hardware used are m5 xlarge servers.
There are 5 indices with 6 shards and 1 replica. The update operations take around 10 seconds even for updating a single field. similar case is with delete. however querying is quite fast. Is this because of high CPU load?
2 out of 5 indices, continuously undergo a update and write operations as they listen from a kafka stream. size of the indices are 15GB, 2Gb and the rest are around 100MB.
You need to provide more information to find the root cause:
All the ES nodes are running on different docker containers on the same host or different host?
Do you have resource limit on your ES docker containers?
How much heap size of ES and is it 50% of host machine RAM?
Node which have high CPU, holds the 2 write heavy indices which you mentioned?
what is the refresh interval of your indices which receives high indexing requests.
what is the segment size of your 15 GB indices, use https://www.elastic.co/guide/en/elasticsearch/reference/current/cat-segments.html to get this info.
What all you have debugged so far and is there is any interesting info you want to share to find the issue?

How much data can my Hadoop cluster handle?

I have a 4 node cluster configured to have 1 Namenode and 3 datanodes. Im performing a TPCH benchmark and i would like to know how much data you think my cluster can handle without affecting query response times. My total available HD size is about 700GB, each node has cpu with 8 cores and 16GB of RAM.
I saw some calculations that we could do to find the volume limit but i didnt understand IT, if someone could explain on a simple way how to calculate the data volume that a cluster can handle it would be very helpful.
Thank you
You can use 70 to 80 % of space in ur cluster to store the data, remaining will be used for processing and to store intermediate results in ur cluster.
This way performance will not be impacted
As you mentioned, you already configured your 4 node cluster. You can go and check in NN webUI-->Configured capacity section to find out the storage details, Let me know if you find any difficulties.

hadoop not creating enough containers when more nodes are used

So I'm trying to run some hadoop jobs on AWS R3.4xLarge machines. They have 16 vcores and 122 gigabytes of ram available.
Each of my mappers requires about 8 gigs of ram and one thread, so these machines are very nearly perfect for the job.
I have mapreduce.memory.mb set to 8192,
and mapreduce.map.java.opts set to -Xmx6144
This should result in approximately 14 mappers (in practice nearer to 12) running on each machine.
This is in fact the case for a 2 slave setup, where the scheduler shows 90 percent utilization of the cluster.
When scaling to, say, 4 slaves however, it seems that hadoop simply doesnt create more mappers. In fact it creates LESS.
On my 2 slave setup I had just under 30 mappers running at any one time, on four slaves I had about 20. The machines were sitting at just under 50 percent utilization.
The vcores are there, the physical memory is there. What the heck is missing? Why is hadoop not creating more containers?
So it turns out that this is one of those hadoop things that never makes sense, no matter how hard you try to figure it out.
there is a setting in yarn-default called yarn.nodemanager.heartbeat.interval-ms.
This is set to 1000. Apparently it controls the minimum period between assigning containers in milliseconds.
This means it only creates one new map task per second. This means the number of containers is limited by how many containers I have running*the time that it takes for a container to be finished.
By setting this value to 50, or better yet, 1, I was able to get the kind of scaling that is expected from a hadoop cluster. Honestly should be documented better.

Tuning Hadoop job execution on YARN

A bit of intro - I'm learning about Hadoop. I have implemented machine learning algorithm on top of Hadoop (clustering) and tested it only on a small example (30MB).
A couple of days ago I installed Ambari and created a small cluster of four machines (master and 3 workers). Master has Resource manager and NameNode.
Now I'm testing my algorithm by increasing the amount of data (300MB, 3GB). I'm looking for a pointer how to tune up my mini-cluster. Concretely, I would like to know how to determine MapReduce2 and YARN settings in Ambari.
How to determine min/max memory for container, reserved memory for container, Sort Allocation Memory, map memory and reduce memory?
The problem is that execution of my jobs is very slow on Hadoop (and clustering is an iterative algorithm, which makes things worse).
I have a feeling that my cluster setup is not good, because of the following reason:
I run a job for a dataset of 30MB (I set-up block memory for this job to be 8MB, since data is small and processing is intensive) - execution time 30 minutes
I run the same job, but multiply same dataset 10 times - 300MB (same block size, 8MB) - execution time 2 hours
Now same amount of data - 300MB, but block size 128MB - same execution time, maybe even a bit greater than 2 hours
Size of blocks on HDFS is 128MB, so I thought that this will cause the speedup, but that is not the case. My doubts are that the cluster setup (min/max RAM size, map and reduce RAM) is not good, hence it cannot improve even though greater data locality is achieved.
Could this be the consequence of a bad setup, or am I wrong?
Please set the below properties in Yarn configuratins to allocate 33% of max yarn memory per job, which can be altered based on your requirement.
yarn.scheduler.capacity.root.default.user-limit-factor=1
yarn.scheduler.capacity.root.default.user-limit-factor=0.33
If you need further info on this, please refer following link https://analyticsanvil.wordpress.com/2015/08/16/managing-yarn-memory-with-multiple-hive-users/

Cloudera 5.4.4 Cluster - Getting aggregate usage metrics

I would like to collect aggregate usage metrics from a Cloudera 5.4.4 Hadoop cluster. Some of the metrics in my mind are as below:
Average CPU utilization of the cluster per day/ per week
Top n longest running jobs/queries on Hadoop
Top n users who use the cluster most (by utilization, by number of submitted jobs)
Cluster disk usage vs disk capacity
Cluster disk usage growth over time
Are there any APIs/resources/tools etc that I could use for starting with this? I don't think I am entirely sure of where to begin from. Any starting point would be greatly appreciated. Also, please do share your experience with cluster usage metrics, if you have had any.
Thanks in advance!
Ganglia is an open-source, scalable and distributed monitoring system for large clusters. It collects, aggregates and provides time-series views of tens of machine-related metrics such as CPU, memory, storage, network usage. You can see Ganglia in action at UC Berkeley Grid.
Ganglia is also a popular solution for monitoring Hadoop and HBase clusters, since Hadoop (and HBase) has built-in support for publishing its metrics to Ganglia. With Ganglia you may easily see the number of bytes written by a particular HDSF datanode over time, the block cache hit ratio for a given HBase region server, the total number of requests to the HBase cluster, time spent in garbage collection and many, many others.
ref- http://hakunamapdata.com/ganglia-configuration-for-a-small-hadoop-cluster-and-some-troubleshooting/
I hope this link (here) may provide some details for 2 and 3.

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