I was implementing the Boyer-Moore Algorithm for substring search in Python when I learned about the Galil Rule. I've looked around online for the Galil Rule but I haven't found anything more than a couple of sentences, and I cannot get access to the original paper. How can I implement this into my current algorithm?
i = 0
while i < (N - M + 1):
skip = 0
for j in reversed(range(0, M)):
if pattern[j] != text[i + j]:
skip = max(1, j - offsets[text[i+j]])
break
if skip == 0:
return i
i += skip
return -1
Notes:
offsets[c] = -1 if c is not in the pattern
offsets[c] = last index of c in the pattern
Example:
aaabcb
offsets[a] = 2
offsets[b] = 5
offsets[c] = 4
offsets[d] = -1
The few sentences I have found have said to keep track of when the first mismatch occurs in my inner loop (j, if the if-statement inside the inner loop is True) and the position in which I started the comparisons (i + j, in my case). I understand the intuition that I've already checked all the indices in between those, so I shouldn't have to do those comparisons again. I just don't understand how to connect the dots and arrive at an implementation.
The Galil rule is about exploiting periodicity in the pattern to reduce comparisons. Say you have a pattern abcabcab. It's periodic with smallest period abc. In general, a pattern P is periodic if there's a string U such that P is a prefix of UUUUU.... (In the above example, abcabcab is clearly a prefix of the repeating string abc = U.) We call the shortest such string the period of P. Let the length of that period be k (in the example above k = 3 since U = abc).
First of all, keep in mind that the Galil rule applies only after you've found an occurrence of P in the text. When you do that, the Galil rule says that you could shift by k (the periodicity of the pattern) and you only have to compare the last k characters of the now shifted pattern to determine if there was a match.
Here's an example:
P = ababa
T = bababababab
U = ab
k = 2
First occurrence: b[ababa]babab. Now you can shift by k = 2 and you only have to check the last two characters of the pattern:
T = bababa[ba]bab
P = aba[ba] // Only need to compare chars inside brackets for next match.
The rest of P must match since P is periodic and you shifted it by its period k from an existing match (this is crucial) so the repeating parts will nicely line up.
If you've found another match, just repeat. If you find a mismatch, however, you revert to the standard Boyer-Moore algorithm until you find another match. Remember, you can only use the Galil rule when you find a match and you shift by k (otherwise the pattern is not guaranteed to line up with the previous occurrence).
Now, you might wonder, how to determine k for a given pattern P. You'll need to calculate the suffixes array N first, where N[i] will be the length of the longest common suffix of the prefix P[0, i] and P. (You can calculate the suffixes array by calculating the prefixes array Z on the reverse of P using the Z algorithm, as described here, for example.) Once you have the suffixes array, you can easily find k since it'll be the smallest k > 0 such that N[m - k - 1] == m - k (where m = |P|).
For example:
P = ababa
m = 5
N = [1, 0, 3, 0, 5]
k = 2 because N[m - k - 1] == N[5 - 2 - 1] == N[2] == 3 == 5 - k
The answer by #Lajos Nagy has explained the idea of Galil rule perfectly, however we have a more straightforward way to calculate k:
Just use the prefix function of KMP algorithm.
The prefix[i] means the longest proper prefix of P[0..i] which is also a suffix.
And, k = m-prefix[m-1] .
This article has explained the details.
Given a number n of x digits. How to remove y digits in a way the remaining digits results in the greater possible number?
Examples:
1)x=7 y=3
n=7816295
-8-6-95
=8695
2)x=4 y=2
n=4213
4--3
=43
3)x=3 y=1
n=888
=88
Just to state: x > y > 0.
For each digit to remove: iterate through the digits left to right; if you find a digit that's less than the one to its right, remove it and stop, otherwise remove the last digit.
If the number of digits x is greater than the actual length of the number, it means there are leading zeros. Since those will be the first to go, you can simply reduce the count y by a corresponding amount.
Here's a working version in Python:
def remove_digits(n, x, y):
s = str(n)
if len(s) > x:
raise ValueError
elif len(s) < x:
y -= x - len(s)
if y <= 0:
return n
for r in range(y):
for i in range(len(s)):
if s[i] < s[i+1:i+2]:
break
s = s[:i] + s[i+1:]
return int(s)
>>> remove_digits(7816295, 7, 3)
8695
>>> remove_digits(4213, 4, 2)
43
>>> remove_digits(888, 3, 1)
88
I hesitated to submit this, because it seems too simple. But I wasn't able to think of a case where it wouldn't work.
if x = y we have to remove all the digits.
Otherwise, you need to find maximum digit in first y + 1 digits. Then remove all the y0 elements before this maximum digit. Then you need to add that maximum to the answer and then repeat that task again, but you need now to remove y - y0 elements now.
Straight forward implementation will work in O(x^2) time in the worst case.
But finding maximum in the given range can be done effectively using Segment Tree data structure. Time complexity will be O(x * log(x)) in the worst case.
P. S. I just realized, that it possible to solve in O(x) also, using the fact, that exists only 10 digits (but the algorithm maybe a little bit complicated). We need to find the minimum in the given range [L, R], but the ranges in this task will "change" from left to the right (L and R always increase). And we just need to store 10 pointers to the digits (1 per digit) to the first position in the number such that position >= L. Then to find the minimum, we need to check only 10 pointers. To update the pointers, we will try to move them right.
So the time complexity will be O(10 * x) = O(x)
Here's an O(x) solution. It builds an index that maps (i, d) to j, the smallest number > i such that the j'th digit of n is d. With this index, one can easily find the largest possible next digit in the solution in O(1) time.
def index(digits):
next = [len(digits)+1] * 10
for i in xrange(len(digits), 0, -1):
next[ord(digits[i-1])-ord('0')] = i-1
yield next[::-1]
def minseq(n, y):
n = str(n)
idx = list(index(n))[::-1]
i, r = 0, []
for ry in xrange(len(n)-y):
i = next(j for j in idx[i] if j <= y+ry) + 1
r.append(n[i - 1])
return ''.join(r)
print minseq(7816295, 3)
print minseq(4213, 2)
Pseudocode:
Number.toDigits().filter (sortedSet (Number.toDigits()). take (y))
Imho you don't need to know x.
For efficiency, Number.toDigits () could be precalculated
digits = Number.toDigits()
digits.filter (sortedSet (digits).take (y))
Depending on language and context, you either output the digits and are done or have to convert the result into a number again.
Working Scala-Code for example:
def toDigits (l: Long) : List [Long] = if (l < 10) l :: Nil else (toDigits (l /10)) :+ (l % 10)
val num = 734529L
val dig = toDigits (num)
dig.filter (_ > ((dig.sorted).take(2).last))
A sorted set is a set which is sorted, which means, every element is only contained once and then the resulting collection is sorted by some criteria, for example numerical ascending. => 234579.
We take two of them (23) and from that subset the last (3) and filter the number by the criteria, that the digits have to be greater than that value (3).
Your question does not explicitly say, that each digit is only contained once in the original number, but since you didn't give a criterion, which one to remove in doubt, I took it as an implicit assumption.
Other languages may of course have other expressions (x.sorted, x.toSortedSet, new SortedSet (num), ...) or lack certain classes, functions, which you would have to build on your own.
You might need to write your own filter method, which takes a pedicate P, and a collection C, and returns a new collection of all elements which satisfy P, P being a Method which takes one T and returns a Boolean. Very useful stuff.
Here's the game:
There is a string of 0s and 1s and in each turn a player is allowed to
convert a set of contiguous 1s to 0s. A player can convert at most k
contiguous 1s to 0s and has to convert at least one 1 to 0 in his
move. The player who is unable to make a move loses.
Example:
10100111 (k=2)
Here the winning move would be: 10100101 (converted the 2nd last 1 to 0)
It's a 2 player impartial game and I tried to analyse it as a variant of nim game. There are n heaps each heap with ai marbles (n sets of contiguous 1s). A player can split a heap into 2 heaps by removing at most k marbles from anywhere in that heap. Supposing a heap has 5 marbles (*****) and you split the heap by removing k=2 marbles from position 2 (* **). Also, if you would remove the first or last k marbles, the heap wouldn't split, only its size would be reduced by k.
Can this model help find the strategy for the original game? If yes, what would be the optimal strategy?
Any help would be appreciated!
As ypercube mentioned, game can be solved and for each position it is possible to show is it winning (N-position) or losing (P) position.
It is enough to consider:
Initial losing (P) position is string with n zeros,
Winning (N) position is any position from where is a move to some P-position,
P-position is a position which every move lead to N-position.
With that it is easy to find value of each position by starting with initial position, find next N-positions, from these N-positions find (possible) P-positions, ...
Here is a python code that solves this game:
from itertools import product
from collections import defaultdict
class Game(object):
def __init__(self, n, k):
self.n, self.k = n, k
def states(self): # All strings with 0|1 of length n
return (''.join(x) for x in product(('0', '1'), repeat=self.n))
def set_zeros(self, c, i, l): # Set zeros in c from position i with length l
return c[:i] + '0'*l + c[i+l:]
def next_positions(self, c): # All moves from given position
for i in xrange(self.n):
if c[i] == '1': # First '1'
yield self.set_zeros(c, i, 1)
for j in xrange(1, self.k):
if i+j < self.n and c[i+j] == '1':
yield self.set_zeros(c, i, j+1)
else:
break
def lost_positions(self): # Initial lost position(s)
return ['0'*self.n]
def solve(self):
next_pos = {} # Maps position to posible positions after a move
prev_pos = defaultdict(set) # Maps position to posible positions before that move
win_lose = {} # True - win/N-position, False - lose/P-position, None - not decided
for s in self.states():
win_lose[s] = None
next_pos[s] = set(self.next_positions(s))
for n in next_pos[s]:
prev_pos[n].add(s)
# Initial loses positions
loses_to_check = set(self.lost_positions())
for c in loses_to_check:
win_lose[c] = False
#
while loses_to_check:
lost_c = loses_to_check.pop()
for w_pos in prev_pos[lost_c]: # Winning moves
if win_lose[w_pos] is None:
win_lose[w_pos] = True
for x in prev_pos[w_pos]: # Check positions before w_pos for P-position
if all(win_lose[i] for i in next_pos[x]):
win_lose[x] = False
loses_to_check.add(x)
return win_lose
comb = '10100111'
g = Game(len(comb), 2)
win_lose = g.solve()
print comb, win_lose[comb]
Note: changing/overriding methods states(), next_positions(c), lost_positions() is enough to implement solver for similar games.
Selecting without any weights (equal probabilities) is beautifully described here.
I was wondering if there is a way to convert this approach to a weighted one.
I am also interested in other approaches as well.
Update: Sampling without replacement
If the sampling is with replacement, you can use this algorithm (implemented here in Python):
import random
items = [(10, "low"),
(100, "mid"),
(890, "large")]
def weighted_sample(items, n):
total = float(sum(w for w, v in items))
i = 0
w, v = items[0]
while n:
x = total * (1 - random.random() ** (1.0 / n))
total -= x
while x > w:
x -= w
i += 1
w, v = items[i]
w -= x
yield v
n -= 1
This is O(n + m) where m is the number of items.
Why does this work? It is based on the following algorithm:
def n_random_numbers_decreasing(v, n):
"""Like reversed(sorted(v * random() for i in range(n))),
but faster because we avoid sorting."""
while n:
v *= random.random() ** (1.0 / n)
yield v
n -= 1
The function weighted_sample is just this algorithm fused with a walk of the items list to pick out the items selected by those random numbers.
This in turn works because the probability that n random numbers 0..v will all happen to be less than z is P = (z/v)n. Solve for z, and you get z = vP1/n. Substituting a random number for P picks the largest number with the correct distribution; and we can just repeat the process to select all the other numbers.
If the sampling is without replacement, you can put all the items into a binary heap, where each node caches the total of the weights of all items in that subheap. Building the heap is O(m). Selecting a random item from the heap, respecting the weights, is O(log m). Removing that item and updating the cached totals is also O(log m). So you can pick n items in O(m + n log m) time.
(Note: "weight" here means that every time an element is selected, the remaining possibilities are chosen with probability proportional to their weights. It does not mean that elements appear in the output with a likelihood proportional to their weights.)
Here's an implementation of that, plentifully commented:
import random
class Node:
# Each node in the heap has a weight, value, and total weight.
# The total weight, self.tw, is self.w plus the weight of any children.
__slots__ = ['w', 'v', 'tw']
def __init__(self, w, v, tw):
self.w, self.v, self.tw = w, v, tw
def rws_heap(items):
# h is the heap. It's like a binary tree that lives in an array.
# It has a Node for each pair in `items`. h[1] is the root. Each
# other Node h[i] has a parent at h[i>>1]. Each node has up to 2
# children, h[i<<1] and h[(i<<1)+1]. To get this nice simple
# arithmetic, we have to leave h[0] vacant.
h = [None] # leave h[0] vacant
for w, v in items:
h.append(Node(w, v, w))
for i in range(len(h) - 1, 1, -1): # total up the tws
h[i>>1].tw += h[i].tw # add h[i]'s total to its parent
return h
def rws_heap_pop(h):
gas = h[1].tw * random.random() # start with a random amount of gas
i = 1 # start driving at the root
while gas >= h[i].w: # while we have enough gas to get past node i:
gas -= h[i].w # drive past node i
i <<= 1 # move to first child
if gas >= h[i].tw: # if we have enough gas:
gas -= h[i].tw # drive past first child and descendants
i += 1 # move to second child
w = h[i].w # out of gas! h[i] is the selected node.
v = h[i].v
h[i].w = 0 # make sure this node isn't chosen again
while i: # fix up total weights
h[i].tw -= w
i >>= 1
return v
def random_weighted_sample_no_replacement(items, n):
heap = rws_heap(items) # just make a heap...
for i in range(n):
yield rws_heap_pop(heap) # and pop n items off it.
If the sampling is with replacement, use the roulette-wheel selection technique (often used in genetic algorithms):
sort the weights
compute the cumulative weights
pick a random number in [0,1]*totalWeight
find the interval in which this number falls into
select the elements with the corresponding interval
repeat k times
If the sampling is without replacement, you can adapt the above technique by removing the selected element from the list after each iteration, then re-normalizing the weights so that their sum is 1 (valid probability distribution function)
I know this is a very old question, but I think there's a neat trick to do this in O(n) time if you apply a little math!
The exponential distribution has two very useful properties.
Given n samples from different exponential distributions with different rate parameters, the probability that a given sample is the minimum is equal to its rate parameter divided by the sum of all rate parameters.
It is "memoryless". So if you already know the minimum, then the probability that any of the remaining elements is the 2nd-to-min is the same as the probability that if the true min were removed (and never generated), that element would have been the new min. This seems obvious, but I think because of some conditional probability issues, it might not be true of other distributions.
Using fact 1, we know that choosing a single element can be done by generating these exponential distribution samples with rate parameter equal to the weight, and then choosing the one with minimum value.
Using fact 2, we know that we don't have to re-generate the exponential samples. Instead, just generate one for each element, and take the k elements with lowest samples.
Finding the lowest k can be done in O(n). Use the Quickselect algorithm to find the k-th element, then simply take another pass through all elements and output all lower than the k-th.
A useful note: if you don't have immediate access to a library to generate exponential distribution samples, it can be easily done by: -ln(rand())/weight
I've done this in Ruby
https://github.com/fl00r/pickup
require 'pickup'
pond = {
"selmon" => 1,
"carp" => 4,
"crucian" => 3,
"herring" => 6,
"sturgeon" => 8,
"gudgeon" => 10,
"minnow" => 20
}
pickup = Pickup.new(pond, uniq: true)
pickup.pick(3)
#=> [ "gudgeon", "herring", "minnow" ]
pickup.pick
#=> "herring"
pickup.pick
#=> "gudgeon"
pickup.pick
#=> "sturgeon"
If you want to generate large arrays of random integers with replacement, you can use piecewise linear interpolation. For example, using NumPy/SciPy:
import numpy
import scipy.interpolate
def weighted_randint(weights, size=None):
"""Given an n-element vector of weights, randomly sample
integers up to n with probabilities proportional to weights"""
n = weights.size
# normalize so that the weights sum to unity
weights = weights / numpy.linalg.norm(weights, 1)
# cumulative sum of weights
cumulative_weights = weights.cumsum()
# piecewise-linear interpolating function whose domain is
# the unit interval and whose range is the integers up to n
f = scipy.interpolate.interp1d(
numpy.hstack((0.0, weights)),
numpy.arange(n + 1), kind='linear')
return f(numpy.random.random(size=size)).astype(int)
This is not effective if you want to sample without replacement.
Here's a Go implementation from geodns:
package foo
import (
"log"
"math/rand"
)
type server struct {
Weight int
data interface{}
}
func foo(servers []server) {
// servers list is already sorted by the Weight attribute
// number of items to pick
max := 4
result := make([]server, max)
sum := 0
for _, r := range servers {
sum += r.Weight
}
for si := 0; si < max; si++ {
n := rand.Intn(sum + 1)
s := 0
for i := range servers {
s += int(servers[i].Weight)
if s >= n {
log.Println("Picked record", i, servers[i])
sum -= servers[i].Weight
result[si] = servers[i]
// remove the server from the list
servers = append(servers[:i], servers[i+1:]...)
break
}
}
}
return result
}
If you want to pick x elements from a weighted set without replacement such that elements are chosen with a probability proportional to their weights:
import random
def weighted_choose_subset(weighted_set, count):
"""Return a random sample of count elements from a weighted set.
weighted_set should be a sequence of tuples of the form
(item, weight), for example: [('a', 1), ('b', 2), ('c', 3)]
Each element from weighted_set shows up at most once in the
result, and the relative likelihood of two particular elements
showing up is equal to the ratio of their weights.
This works as follows:
1.) Line up the items along the number line from [0, the sum
of all weights) such that each item occupies a segment of
length equal to its weight.
2.) Randomly pick a number "start" in the range [0, total
weight / count).
3.) Find all the points "start + n/count" (for all integers n
such that the point is within our segments) and yield the set
containing the items marked by those points.
Note that this implementation may not return each possible
subset. For example, with the input ([('a': 1), ('b': 1),
('c': 1), ('d': 1)], 2), it may only produce the sets ['a',
'c'] and ['b', 'd'], but it will do so such that the weights
are respected.
This implementation only works for nonnegative integral
weights. The highest weight in the input set must be less
than the total weight divided by the count; otherwise it would
be impossible to respect the weights while never returning
that element more than once per invocation.
"""
if count == 0:
return []
total_weight = 0
max_weight = 0
borders = []
for item, weight in weighted_set:
if weight < 0:
raise RuntimeError("All weights must be positive integers")
# Scale up weights so dividing total_weight / count doesn't truncate:
weight *= count
total_weight += weight
borders.append(total_weight)
max_weight = max(max_weight, weight)
step = int(total_weight / count)
if max_weight > step:
raise RuntimeError(
"Each weight must be less than total weight / count")
next_stop = random.randint(0, step - 1)
results = []
current = 0
for i in range(count):
while borders[current] <= next_stop:
current += 1
results.append(weighted_set[current][0])
next_stop += step
return results
In the question you linked to, Kyle's solution would work with a trivial generalization.
Scan the list and sum the total weights. Then the probability to choose an element should be:
1 - (1 - (#needed/(weight left)))/(weight at n). After visiting a node, subtract it's weight from the total. Also, if you need n and have n left, you have to stop explicitly.
You can check that with everything having weight 1, this simplifies to kyle's solution.
Edited: (had to rethink what twice as likely meant)
This one does exactly that with O(n) and no excess memory usage. I believe this is a clever and efficient solution easy to port to any language. The first two lines are just to populate sample data in Drupal.
function getNrandomGuysWithWeight($numitems){
$q = db_query('SELECT id, weight FROM theTableWithTheData');
$q = $q->fetchAll();
$accum = 0;
foreach($q as $r){
$accum += $r->weight;
$r->weight = $accum;
}
$out = array();
while(count($out) < $numitems && count($q)){
$n = rand(0,$accum);
$lessaccum = NULL;
$prevaccum = 0;
$idxrm = 0;
foreach($q as $i=>$r){
if(($lessaccum == NULL) && ($n <= $r->weight)){
$out[] = $r->id;
$lessaccum = $r->weight- $prevaccum;
$accum -= $lessaccum;
$idxrm = $i;
}else if($lessaccum){
$r->weight -= $lessaccum;
}
$prevaccum = $r->weight;
}
unset($q[$idxrm]);
}
return $out;
}
I putting here a simple solution for picking 1 item, you can easily expand it for k items (Java style):
double random = Math.random();
double sum = 0;
for (int i = 0; i < items.length; i++) {
val = items[i];
sum += val.getValue();
if (sum > random) {
selected = val;
break;
}
}
I have implemented an algorithm similar to Jason Orendorff's idea in Rust here. My version additionally supports bulk operations: insert and remove (when you want to remove a bunch of items given by their ids, not through the weighted selection path) from the data structure in O(m + log n) time where m is the number of items to remove and n the number of items in stored.
Sampling wihout replacement with recursion - elegant and very short solution in c#
//how many ways we can choose 4 out of 60 students, so that every time we choose different 4
class Program
{
static void Main(string[] args)
{
int group = 60;
int studentsToChoose = 4;
Console.WriteLine(FindNumberOfStudents(studentsToChoose, group));
}
private static int FindNumberOfStudents(int studentsToChoose, int group)
{
if (studentsToChoose == group || studentsToChoose == 0)
return 1;
return FindNumberOfStudents(studentsToChoose, group - 1) + FindNumberOfStudents(studentsToChoose - 1, group - 1);
}
}
I just spent a few hours trying to get behind the algorithms underlying sampling without replacement out there and this topic is more complex than I initially thought. That's exciting! For the benefit of a future readers (have a good day!) I document my insights here including a ready to use function which respects the given inclusion probabilities further below. A nice and quick mathematical overview of the various methods can be found here: Tillé: Algorithms of sampling with equal or unequal probabilities. For example Jason's method can be found on page 46. The caveat with his method is that the weights are not proportional to the inclusion probabilities as also noted in the document. Actually, the i-th inclusion probabilities can be recursively computed as follows:
def inclusion_probability(i, weights, k):
"""
Computes the inclusion probability of the i-th element
in a randomly sampled k-tuple using Jason's algorithm
(see https://stackoverflow.com/a/2149533/7729124)
"""
if k <= 0: return 0
cum_p = 0
for j, weight in enumerate(weights):
# compute the probability of j being selected considering the weights
p = weight / sum(weights)
if i == j:
# if this is the target element, we don't have to go deeper,
# since we know that i is included
cum_p += p
else:
# if this is not the target element, than we compute the conditional
# inclusion probability of i under the constraint that j is included
cond_i = i if i < j else i-1
cond_weights = weights[:j] + weights[j+1:]
cond_p = inclusion_probability(cond_i, cond_weights, k-1)
cum_p += p * cond_p
return cum_p
And we can check the validity of the function above by comparing
In : for i in range(3): print(i, inclusion_probability(i, [1,2,3], 2))
0 0.41666666666666663
1 0.7333333333333333
2 0.85
to
In : import collections, itertools
In : sample_tester = lambda f: collections.Counter(itertools.chain(*(f() for _ in range(10000))))
In : sample_tester(lambda: random_weighted_sample_no_replacement([(1,'a'),(2,'b'),(3,'c')],2))
Out: Counter({'a': 4198, 'b': 7268, 'c': 8534})
One way - also suggested in the document above - to specify the inclusion probabilities is to compute the weights from them. The whole complexity of the question at hand stems from the fact that one cannot do that directly since one basically has to invert the recursion formula, symbolically I claim this is impossible. Numerically it can be done using all kind of methods, e.g. Newton's method. However the complexity of inverting the Jacobian using plain Python becomes unbearable quickly, I really recommend looking into numpy.random.choice in this case.
Luckily there is method using plain Python which might or might not be sufficiently performant for your purposes, it works great if there aren't that many different weights. You can find the algorithm on page 75&76. It works by splitting up the sampling process into parts with the same inclusion probabilities, i.e. we can use random.sample again! I am not going to explain the principle here since the basics are nicely presented on page 69. Here is the code with hopefully a sufficient amount of comments:
def sample_no_replacement_exact(items, k, best_effort=False, random_=None, ε=1e-9):
"""
Returns a random sample of k elements from items, where items is a list of
tuples (weight, element). The inclusion probability of an element in the
final sample is given by
k * weight / sum(weights).
Note that the function raises if a inclusion probability cannot be
satisfied, e.g the following call is obviously illegal:
sample_no_replacement_exact([(1,'a'),(2,'b')],2)
Since selecting two elements means selecting both all the time,
'b' cannot be selected twice as often as 'a'. In general it can be hard to
spot if the weights are illegal and the function does *not* always raise
an exception in that case. To remedy the situation you can pass
best_effort=True which redistributes the inclusion probability mass
if necessary. Note that the inclusion probabilities will change
if deemed necessary.
The algorithm is based on the splitting procedure on page 75/76 in:
http://www.eustat.eus/productosServicios/52.1_Unequal_prob_sampling.pdf
Additional information can be found here:
https://stackoverflow.com/questions/2140787/
:param items: list of tuples of type weight,element
:param k: length of resulting sample
:param best_effort: fix inclusion probabilities if necessary,
(optional, defaults to False)
:param random_: random module to use (optional, defaults to the
standard random module)
:param ε: fuzziness parameter when testing for zero in the context
of floating point arithmetic (optional, defaults to 1e-9)
:return: random sample set of size k
:exception: throws ValueError in case of bad parameters,
throws AssertionError in case of algorithmic impossibilities
"""
# random_ defaults to the random submodule
if not random_:
random_ = random
# special case empty return set
if k <= 0:
return set()
if k > len(items):
raise ValueError("resulting tuple length exceeds number of elements (k > n)")
# sort items by weight
items = sorted(items, key=lambda item: item[0])
# extract the weights and elements
weights, elements = list(zip(*items))
# compute the inclusion probabilities (short: π) of the elements
scaling_factor = k / sum(weights)
π = [scaling_factor * weight for weight in weights]
# in case of best_effort: if a inclusion probability exceeds 1,
# try to rebalance the probabilities such that:
# a) no probability exceeds 1,
# b) the probabilities still sum to k, and
# c) the probability masses flow from top to bottom:
# [0.2, 0.3, 1.5] -> [0.2, 0.8, 1]
# (remember that π is sorted)
if best_effort and π[-1] > 1 + ε:
# probability mass we still we have to distribute
debt = 0.
for i in reversed(range(len(π))):
if π[i] > 1.:
# an 'offender', take away excess
debt += π[i] - 1.
π[i] = 1.
else:
# case π[i] < 1, i.e. 'save' element
# maximum we can transfer from debt to π[i] and still not
# exceed 1 is computed by the minimum of:
# a) 1 - π[i], and
# b) debt
max_transfer = min(debt, 1. - π[i])
debt -= max_transfer
π[i] += max_transfer
assert debt < ε, "best effort rebalancing failed (impossible)"
# make sure we are talking about probabilities
if any(not (0 - ε <= π_i <= 1 + ε) for π_i in π):
raise ValueError("inclusion probabilities not satisfiable: {}" \
.format(list(zip(π, elements))))
# special case equal probabilities
# (up to fuzziness parameter, remember that π is sorted)
if π[-1] < π[0] + ε:
return set(random_.sample(elements, k))
# compute the two possible lambda values, see formula 7 on page 75
# (remember that π is sorted)
λ1 = π[0] * len(π) / k
λ2 = (1 - π[-1]) * len(π) / (len(π) - k)
λ = min(λ1, λ2)
# there are two cases now, see also page 69
# CASE 1
# with probability λ we are in the equal probability case
# where all elements have the same inclusion probability
if random_.random() < λ:
return set(random_.sample(elements, k))
# CASE 2:
# with probability 1-λ we are in the case of a new sample without
# replacement problem which is strictly simpler,
# it has the following new probabilities (see page 75, π^{(2)}):
new_π = [
(π_i - λ * k / len(π))
/
(1 - λ)
for π_i in π
]
new_items = list(zip(new_π, elements))
# the first few probabilities might be 0, remove them
# NOTE: we make sure that floating point issues do not arise
# by using the fuzziness parameter
while new_items and new_items[0][0] < ε:
new_items = new_items[1:]
# the last few probabilities might be 1, remove them and mark them as selected
# NOTE: we make sure that floating point issues do not arise
# by using the fuzziness parameter
selected_elements = set()
while new_items and new_items[-1][0] > 1 - ε:
selected_elements.add(new_items[-1][1])
new_items = new_items[:-1]
# the algorithm reduces the length of the sample problem,
# it is guaranteed that:
# if λ = λ1: the first item has probability 0
# if λ = λ2: the last item has probability 1
assert len(new_items) < len(items), "problem was not simplified (impossible)"
# recursive call with the simpler sample problem
# NOTE: we have to make sure that the selected elements are included
return sample_no_replacement_exact(
new_items,
k - len(selected_elements),
best_effort=best_effort,
random_=random_,
ε=ε
) | selected_elements
Example:
In : sample_no_replacement_exact([(1,'a'),(2,'b'),(3,'c')],2)
Out: {'b', 'c'}
In : import collections, itertools
In : sample_tester = lambda f: collections.Counter(itertools.chain(*(f() for _ in range(10000))))
In : sample_tester(lambda: sample_no_replacement_exact([(1,'a'),(2,'b'),(3,'c'),(4,'d')],2))
Out: Counter({'a': 2048, 'b': 4051, 'c': 5979, 'd': 7922})
The weights sum up to 10, hence the inclusion probabilities compute to: a → 20%, b → 40%, c → 60%, d → 80%. (Sum: 200% = k.) It works!
Just one word of caution for the productive use of this function, it can be very hard to spot illegal inputs for the weights. An obvious illegal example is
In: sample_no_replacement_exact([(1,'a'),(2,'b')],2)
ValueError: inclusion probabilities not satisfiable: [(0.6666666666666666, 'a'), (1.3333333333333333, 'b')]
b cannot appear twice as often as a since both have to be always be selected. There are more subtle examples. To avoid an exception in production just use best_effort=True, which rebalances the inclusion probability mass such that we have always a valid distribution. Obviously this might change the inclusion probabilities.
I used a associative map (weight,object). for example:
{
(10,"low"),
(100,"mid"),
(10000,"large")
}
total=10110
peek a random number between 0 and 'total' and iterate over the keys until this number fits in a given range.