I'm trying to install readline 6 from source but run into an error during 'make install'.
Here is the end of the output after executing 'sudo make install'
( cd shlib ; make DESTDIR= install )
/bin/sh ../support/mkdirs /usr/local/lib
/bin/sh ../support/shlib-install -O darwin9.7.0 -d /usr/local/lib -b /usr/local/bin -i "/usr/bin/install -c -m 644" libhistory.6.0.dylib
/bin/sh ../support/shlib-install -O darwin9.7.0 -d /usr/local/lib -b /usr/local/bin -i "/usr/bin/install -c -m 644" libreadline.6.0.dylib
install: you may need to run ldconfig
I know that ldconfig isn't installed by default on OS X, and I read somewhere that it shouldn't be needed to fix this issue. I believe it has something to do with dynamic libraries, but I haven't been able to find out how to fix the issue, anyone have any insight?
FYI, I'm running OS X on an intel 2.4ghz macbook
thanks
P.S. I also applied the 3 available readline 6 patches before running configure and make
Actually, this isn't an error at all... it's just a notice message at the end of the install. It get this too, and my readline 6 is happily installed.
If you check /usr/local/lib and see readline there, you're done :-) No need to run any equivalent of ldconfig.
$ ls /usr/local/lib | grep readline
libreadline.6.0.dylib
libreadline.6.dylib
libreadline.a
libreadline.dylib
Related
I'm trying to install Python 2.7.7 using Homebrew AND pyenv on my Mac (MacBook Air, OSX 12.5 Monterrey, 1.6 GHz Dual-Core Intel Core i5) but keep getting this “Missing zlib” error.
Just for reference, I have done the following:
When I Installed pyenv, I ran command nano ~/.bashrc (I'm using bash shell) - and pasted and saved on /.bashrc ---> eval "$(pyenv init -)"
then I ran pyenv install 2.7.7 (didn't work and found online step 3.)
CPPFLAGS="-I$(brew --prefix zlib)/include" pyenv install -v 2.7.7 (Again, same error and did step 4.)
ran brew reinstall zlib and overrode on "/.bashrc" eval "$(pyenv init -)" to:
export PATH="/usr/local/bin:$PATH"
eval "$(pyenv init -)"
eval "$(pyenv virtualenv-init -)"
export LDFLAGS="-L/usr/local/opt/zlib/lib -L/usr/local/opt/bzip2/lib"
export CPPFLAGS="-I/usr/local/opt/zlib/include -I/usr/local/opt/bzip2/include"
-------------Start of Error ----------------
rm -f /Users/victor/.pyenv/versions/2.7.7/bin/python2
(cd /Users/victor/.pyenv/versions/2.7.7/bin; ln -s python2.7 python2)
rm -f /Users/victor/.pyenv/versions/2.7.7/bin/python2-config
(cd /Users/victor/.pyenv/versions/2.7.7/bin; ln -s python2.7-config python2-config)
rm -f /Users/victor/.pyenv/versions/2.7.7/bin/python-config
(cd /Users/victor/.pyenv/versions/2.7.7/bin; ln -s python2-config python-config)
test -d /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig || /usr/bin/install -c -d -m 755 /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig
rm -f /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig/python2.pc
(cd /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig; ln -s python-2.7.pc python2.pc)
rm -f /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig/python.pc
(cd /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig; ln -s python2.pc python.pc)
rm -f /Users/victor/.pyenv/versions/2.7.7/share/man/man1/python2.1
(cd /Users/victor/.pyenv/versions/2.7.7/share/man/man1; ln -s python2.7.1 python2.1)
rm -f /Users/victor/.pyenv/versions/2.7.7/share/man/man1/python.1
(cd /Users/victor/.pyenv/versions/2.7.7/share/man/man1; ln -s python2.1 python.1)
ERROR: The Python zlib extension was not compiled. Missing the zlib?
Please consult to the Wiki page to fix the problem.
https://github.com/pyenv/pyenv/wiki/Common-build-problems
BUILD FAILED (OS X 12.5 using python-build 20180424)
Inspect or clean up the working tree at /var/folders/__/1_b0871s7fl7fpwydg4ycjj80000gn/T/python-build.20220729111901.75727
Results logged to /var/folders/__/1_b0871s7fl7fpwydg4ycjj80000gn/T/python-build.20220729111901.75727.log
Last 10 log lines:
(cd /Users/victor/.pyenv/versions/2.7.7/bin; ln -s python2-config python-config)
test -d /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig || /usr/bin/install -c -d -m 755 /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig
rm -f /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig/python2.pc
(cd /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig; ln -s python-2.7.pc python2.pc)
rm -f /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig/python.pc
(cd /Users/victor/.pyenv/versions/2.7.7/lib/pkgconfig; ln -s python2.pc python.pc)
rm -f /Users/victor/.pyenv/versions/2.7.7/share/man/man1/python2.1
(cd /Users/victor/.pyenv/versions/2.7.7/share/man/man1; ln -s python2.7.1 python2.1)
rm -f /Users/victor/.pyenv/versions/2.7.7/share/man/man1/python.1
(cd /Users/victor/.pyenv/versions/2.7.7/share/man/man1; ln -s python2.1 python.1)
Victors-MacBook-Air:~ victor$ xcode-select --install
xcode-select: error: command line tools are already installed, use "Software Update" to install updates
Victors-MacBook-Air:~ victor$
Victors-MacBook-Air:~ victor$ xcode-select --install
xcode-select: error: command line tools are already installed, use "Software Update" to install updates
Victors-MacBook-Air:~ victor$
Victors-MacBook-Air:~ victor$ xcode-select --install
xcode-select: error: command line tools are already installed, use "Software Update" to install updates
Victors-MacBook-Air:~ victor$
Victors-MacBook-Air:~ victor$ software update
-bash: software: command not found
------------- End of Error -----------------
Any idea?.... Please let me know... I'd highly appreciate it
With a similar configuration, 2018 MBA on Monterey, I was having the same problem as you with pyenv install 2.7.6
I was able to go past the missing zlib issue with the following additions to the shell's profile:
eval "$(pyenv init -)"
eval "$(pyenv virtualenv-init -)"
export LDFLAGS="-L/usr/local/opt/zlib/lib"
export CPPFLAGS="-I/usr/local/opt/zlib/include"
export PKG_CONFIG_PATH="/usr/local/opt/zlib/lib/pkgconfig"
As a side note, the installation still didn't go through due to a different issue:
That OpenSSL issue has to do with OpenSSL 1.0 being EOL, more info here.
At the end I just went with 2.7.14 which is OpenSSL 2.0 compatible and good enough for my use case.
command line tools are already installed, use "Software Update" to install updates
This is indicating you need to use the Settings to update the command line tools.
$ software update
-bash: software: command not found
There is no command line called "software". Instead open system preferences. Then click on this:
Install any updates requested.
I have installed Brew in MACOS Monterey with the following commands.
mkdir homebrew && curl -L https://github.com/Homebrew/brew/tarball/master | tar xz --strip 1 -C homebrew
eval "$(homebrew/bin/brew shellenv)"
brew update --force --quiet
chmod -R go-w "$(brew --prefix)/share/zsh"
I have tested it after the install, and it works, however closing the terminal session and opening it again causes terminal to say that the command brew is not found after running it. I can still see the homebrew directory, so Im guessing its in the wrong place for terminal to run it.
The only supported method to install brew is found on brew.sh:
/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
Ok I was able to fix the issue by adding the PATH to the .bash_profile file.
I have some problems, trying to install SPM12 on my Mac M1 with Big Sur. My config is:
Mac M1 Big Sur (11.3.1) - 512/16GB
MATLAB_R2020a
SPM12
I followed the instruction here
On Matlab: addpath ./Downloads/spm12/; savepath
On Terminal: export PATH=/Applications/MATLAB_R2020a.app/bin:$PATH
On Terminal (for allowing mex file): sudo xattr -r -d com.apple.quarantine ./Downloads/spm12/
On Terminal sudo find ./Downloads/spm12/ -name \*.mexmaci64 -exec spctl --add {} \;
On Terminal (spm12/src): make distclean
On Terminal (spm12/src): make && make install and it crashes there:
mc#MCs-MacBook-Air src % make && make install
_____________________________________________________________
MacOS compilation (Intel 64 bit)
_____________________________________________________________
mex -O -largeArrayDims -c spm_vol_utils.c -DSPM_UNSIGNED_CHAR
Sorry! We could not determine the machine architecture
for your host. Please contact:
MathWorks Technical Support
for further assistance.
/Applications/MATLAB_R2020a.app/bin/mex: line 295: cleanup: command not found
make: *** [utils_uchar.mexmaci64.o] Error 1
How can I get SPM12 to build?
Got it! So as you said I shouldn't have done the compilation. As I am with Big Sure I only needed to do:
sudo xattr -r -d com.apple.quarantine SPM_PATH
sudo find SPM_PATH -name \*.mexmaci64 -exec spctl --add {} \;
Thanks for your help ;)
When I use stap, it tell me this error as the image,how can i fix it.
Really don't know why this question has been downvotted once. When i get concern, downvotter are one of the reason i always hesitate to ask thing on stackoverflow...
So, got the same concern with a container under ubuntu and it is how i fix it : try to launch an ubuntu bash on docker (not centos but the step should be similar)
docker run -it --cap-add sys_admin ubuntu bash
Then install some library and systemtap
apt-get update
apt-get --yes install build-essential cmake bc curl diffutils git kmod libcurl4-openssl-dev wget
apt-get --yes install systemtap systemtap-sdt-dev
Now install the kernel headers (will take time)
export KERNELVER=$(uname -r | cut -d '-' -f 1)
export KERNELDIR=/linux-$KERNELVER
cd /
curl -o linux-${KERNELVER}.tar.gz https://www.kernel.org/pub/linux/kernel/v4.x/linux-${KERNELVER}.tar.gz
tar zxf linux-${KERNELVER}.tar.gz
cd linux-${KERNELVER}
zcat /proc/1/root/proc/config.gz > .config
make all
make modules_prepare
make headers_install
make modules_install
Now run stap -l 'syscall.*'. It should work and display :
...
syscall.waitpid
syscall.write
syscall.writev
This is taken from : https://github.com/fdebonneval/mobydig/blob/master/resources/build
However, it works when I type:
$ gcc-4.2
Find where gcc-4.2 is installed and go into that directory:
$ cd $(which gcc-4.2)
Check if there is a gcc symlink:
$ ls gcc
If there isn't one, create it:
$ ln -s gcc-4.2 gcc
I got it: all was well after I installed command line tools in Xcode > Preferences > Downloads.