It is said that through LSI, the matrices that are produced U, A and V, they bring together documents which have synonyms. For e.g. if we search for "car", we also get documents which have "automobile". But LSI is nothing but manipulations of matrices. It only takes into account the frequency, not semantics. So whats the thing behind this magic that I am missing? Please explain.
LSI basically creates a frequency profile of each document, and looks for documents with similar frequency profiles. If the remainder of the frequency profile is enough alike, it'll classify two documents as being fairly similar, even if one systematically substitutes some words. Conversely, if the frequency profiles are different, it can/will classify documents as different, even if they share frequent use of a few specific terms (e.g., "file" being related to a computer in some cases, and a thing that's used to cut and smooth metal in other cases).
LSI is also typically used with relatively large groups of documents. The other documents can help in finding similarities as well -- even if document A and B look substantially different, if document C uses quite a few terms from both A and B, it can help in finding that A and B are really fairly similar.
According to the Wikipedia article, "LSI is based on the principle that words that are used in the same contexts tend to have similar meanings." That is, if two words seem to be used interchangeably, they might be synonyms.
It's not infallible.
Related
How are keyword clouds constructed?
I know there are a lot of nlp methods, but I'm not sure how they solve the following problem:
You can have several items that each have a list of keywords relating to them.
(In my own program, these items are articles where I can use nlp methods to detect proper nouns, people, places, and (?) possibly subjects. This will be a very large list given a sufficiently sized article, but I will assume that I can winnow the list down using some method by comparing articles. How to do this properly is what I am confused about).
Each item can have a list of keywords, but how do they pick keywords such that the keywords aren't overly specific or overly general between each item?
For example, trivially "the" can be a keyword that is a lot of items.
While "supercalifragilistic" could only be in one.
I suppose that I could create a heuristic where if a word exists in n% of the items where n is sufficiently small, but will return a nice sublist (say 5% of 1000 articles is 50, which seems reasonable) then I could just use that. However, the issue that I take with this approach is that given two different sets of entirely different items, there is most likely some difference in interrelatedness between the items, and I'm throwing away that information.
This is very unsatisfying.
I feel that given the popularity of keyword clouds there must have been a solution created already. I don't want to use a library however as I want to understand and manipulate the assumptions in the math.
If anyone has any ideas please let me know.
Thanks!
EDIT:
freenode/programming/guardianx has suggested https://en.wikipedia.org/wiki/Tf%E2%80%93idf
tf-idf is ok btw, but the issue is that the weighting needs to be determined apriori. Given that two distinct collections of documents will have a different inherent similarity between documents, assuming an apriori weighting does not feel correct
freenode/programming/anon suggested https://en.wikipedia.org/wiki/Word2vec
I'm not sure I want something that uses a neural net (a little complicated for this problem?), but still considering.
Tf-idf is still a pretty standard method for extracting keywords. You can try a demo of a tf-idf-based keyword extractor (which has the idf vector, as you say apriori determined, estimated from Wikipedia). A popular alternative is the TextRank algorithm based on PageRank that has an off-the-shelf implementation in Gensim.
If you decide for your own implementation, note that all algorithms typically need plenty of tuning and text preprocessing to work correctly.
The minimum you need to do is removing stopwords that you know that they never can be a keyword (prepositions, articles, pronouns, etc.). If you want something fancier, you can use for instance Spacy to keep only desired parts of speech (nouns, verbs, adjectives). You can also include frequent multiword expressions (gensim has good function for automatic collocation detection), named entities (spacy can do it). You can get better results if you run coreference resolution and substitute pronouns with what they refer to... There are endless options for improvements.
I have to manually go through a long list of terms (~3500) which have been entered by users through the years. Beside other things, I want to reduce the list by looking for synonyms, typos and alternate spellings.
My work will be much easier if I can group the list into clusters of possible typos before starting. I was imagining to use some metric which can calculate the similarity to a term, e.g. in percent, and then cluster everything which has a similarity higher than some threshold. As I am going through it manually anyway, I don't mind a high failure rate, if it can keep the whole thing simple.
Ideally, there exists some easily available library to do this for me, implemented by people who know what they are doing. If there is no such, then at least one calculating a similarity metric for a pair of strings would be great, I can manage the clustering myself.
If this is not available either, do you know of a good algorithm which is simple to implement? I was first thinking a Hamming distance divided by word length will be a good metric, but noticed that while it will catch swapped letters, it won't handle deletions and insertions well (ptgs-1 will be caught as very similar to ptgs/1, but hematopoiesis won't be caught as very similar to haematopoiesis).
As for the requirements on the library/algorithm: it has to rely completely on spelling. I know that the usual NLP libraries don't work this way, but
there is no full text available for it to consider context.
it can't use a dictionary corpus of words, because the terms are far outside of any everyday language, frequently abbreviations of highly specialized terms.
Finally, I am most familiar with C# as a programming language, and I already have a C# pseudoscript which does some preliminary cleanup. If there is no one-step solution (feed list in, get grouped list out), I will prefer a library I can call from within a .NET program.
The whole thing should be relatively quick to learn for somebody with almost no previous knowledge in information retrieval. This will save me maybe 5-6 hours of manual work, and I don't want to spend more time than that in setting up an automated solution. OK, maybe up to 50% longer if I get the chance to learn something awesome :)
The question: What should I use, a library, or an algorithm? Which ones should I consider? If what I need is a library, how do I recognize one which is capable of delivering results based on spelling alone, as opposed to relying on context or dictionary use?
edit To clarify, I am not looking for actual semantic relatedness the way search or recommendation engines need it. I need to catch typos. So, I am looking for a metric by which mouse and rodent have zero similarity, but mouse and house have a very high similarity. And I am afraid that tools like Lucene use a metric which gets these two examples wrong (for my purposes).
Basically you are looking to cluster terms according to Semantic Relatedness.
One (hard) way to do it is following Markovitch and Gabrilovitch approach.
A quicker way will be consisting of the following steps:
download wikipedia dump and an open source Information Retrieval library such as Lucene (or Lucene.NET).
Index the files.
Search each term in the index - and get a vector - denoting how relevant the term (the query) is for each document. Note that this will be a vector of size |D|, where |D| is the total number of documents in the collection.
Cluster your vectors in any clustering algorithm. Each vector represents one term from your initial list.
If you are interested only in "visual" similarity (words are written similar to each other) then you can settle for levenshtein distance, but it won't be able to give you semantic relatedness of terms.For example, you won't be able to relate between "fall" and "autumn".
I am tasked with trying to create an automated system that removes personal information from text documents.
Emails, phone numbers are relatively easy to remove. Names are not. The problem is hard because there are names in the documents that need to be kept (eg, references, celebrities, characters etc). The author name needs to be removed from the content (there may also be more than one author).
I have currently thought of the following:
Quite often personal names are located at the beginning of a document
Look at how frequently the name is used in the document (personal names tend to be written just once)
Search for words around the name to find patterns (mentions of university and so on...)
Any ideas? Anyone solved this problem already??
With current technology, doing what what you are describing in a fully automated way with a low error rate is impossible.
It might be possible to come up with an approximate solution, but it would still make a lot of errors...... either false positives or false negatives or some combination of the two.
If you are still really determined to try, I think your best approach would be Bayseian filtering (as used in spam filtering). The reason for this is that it is quite good at assigning probabilities based on relative positions and frequencies of words, and could also learn which names are more likely / less likely to be celebrities etc.
The area of machine learning that you would need to learn about to make an attempt at this would be natural language processing. There are a few different approaches that could be used, bayesian networks (something better then a naive bayes classifier), support vector machines, or neural nets would be areas to research. Whatever system you end up building would probably need to use an annotated corpus (labeled set of data) to learn where names should be. Even with a large corpus, whatever you build will not be 100% accurate, so you would probably be better off setting flags at the names for deletion instead of just deleting all of the words that might be names.
This is a common problem in basic cryptography courses (my first programming job).
If you generated a word histogram of your entire document corpus (each bin is a word on the x-axis whose height is frequency represented by height on the y-axis), words like "this", "the", "and" and so forth would be easy to identify because of their large y-values (frequency). Surnames should at the far right of your histogram--very infrequent; given names towards the left, but not by much.
Does this technique definitively identify the names in each document? No, but it could be used to substantially constrain your search, by eliminating all words whose frequency is larger than X. Likewise, there should be other attributes that constrain your search, such as author names only appear once on the documents they authored and not on any other documents.
I have a question that is somewhat high level, so I'll try to be as specific as possible.
I'm doing a lot of research that involves combining disparate data sets with header information that refers to the same entity, usually a company or a financial security. This record linking usually involves header information in which the name is the only common primary identifier, but where some secondary information is often available (such as city and state, dates of operation, relative size, etc). These matches are usually one-to-many, but may be one-to-one or even many-to-many. I have usually done this matching by hand or with very basic text comparison of cleaned substrings. I have occasionally used a simple matching algorithm like a Levenshtein distance measure, but I never got much out of it, in part because I didn't have a good formal way of applying it.
My guess is that this is a fairly common question and that there must be some formalized processes that have been developed to do this type of thing. I've read a few academic papers on the subject that deal with theoretical appropriateness of given approaches, but I haven't found any good source that walks through a recipe or at least a practical framework.
My question is the following:
Does anyone know of a good source for implementing multi-dimensional fuzzy record matching, like a book or a website or a published article or working paper?
I'd prefer something that had practical examples and a well defined approach.
The approach could be iterative, with human checks for improvement at intermediate stages.
(edit) The linked data is used for statistical analysis. As such, a little bit of noise is OK, but there is a strong preference for fewer "incorrect matches" over fewer "incorrect non-matches".
If they were in Python that would be fantastic, but not necessary.
One last thing, if it matters, is that I don't care much about computational efficiency. I'm not implementing this dynamically and I'm usually dealing with a few thousand records.
One common method that shouldn't be terribly expensive for "a few thousand records" would be cosine similarity. Although most often used for comparing text documents, you can easily modify it to work with any kind of data.
The linked Wikipedia article is pretty sparse on details, but following links and doing a few searches will get you some good info. Potentially an implementation that you can modify to fit your purposes. In fact, take a look at Simple implementation of N-Gram, tf-idf and Cosine similarity in Python
A simpler calculation, and one that might be "good enough" for your purposes would be a Jaccard index. The primary difference is that typically cosine similarity takes into account the number of times a word is used in a document and in the entire set of documents, whereas the Jaccard index only cares that a particular word is in the document. There are other differences, but that one strikes me as the most important.
The problem is that you have an array of distances, at least one for each column, and you want to combine those distances in an optimal way to indicate whether a pair of records are the same thing or not.
This is a problem of classification, there are many ways to do it, but logistic regression is one of simpler methods. To train a classifer, you will need to label some pairs of records as either matches or not.
The dedupe python library helps you do this and other parts of the difficult task of record linkage. The documentation has a pretty good overview of how to approach the problem of record linkage comprehensively.
get the x most similar texts from a lot of texts to one text.
maybe change the page to text is better.
You should not compare the text to every text, because its too slow.
The ability of identifying similar documents/pages, whether web pages or more general forms of text or even of codes, has many practical applications. This topics is well represented in scholarly papers and also in less specialized forums. In spite of this relative wealth of documentation, it can be difficult to find the information and techniques relevant to a particular case.
By describing the specific problem at hand and associated requirements, it may be possible to provide you more guidance. In the meantime the following provides a few general ideas.
Many different functions may be used to measure, in some fashion, the similarity of pages. Selecting one (or possibly several) of these functions depends on various factors, including the amount of time and/or space one can allot the problem and also to the level of tolerance desired for noise.
Some of the simpler metrics are:
length of the longest common sequence of words
number of common words
number of common sequences of words of more than n words
number of common words for the top n most frequent words within each document.
length of the document
Some of the metrics above work better when normalized (for example to avoid favoring long pages which, through their sheer size have more chances of having similar words with other pages)
More complicated and/or computationally expensive measurements are:
Edit distance (which is in fact a generic term as there are many ways to measure the Edit distance. In general, the idea is to measure how many [editing] operations it would take to convert one text to the other.)
Algorithms derived from the Ratcliff/Obershelp algorithm (but counting words rather than letters)
Linear algebra-based measurements
Statistical methods such as Bayesian fitlers
In general, we can distinguish measurements/algorithms where most of the calculation can be done once for each document, followed by a extra pass aimed at comparing or combining these measurements (with relatively little extra computation), as opposed to the algorithms that require to deal with the documents to be compared in pairs.
Before choosing one (or indeed several such measures, along with some weighing coefficients), it is important to consider additional factors, beyond the similarity measurement per-se. for example, it may be beneficial to...
normalize the text in some fashion (in the case of web pages, in particular, similar page contents, or similar paragraphs are made to look less similar because of all the "decorum" associated with the page: headers, footers, advertisement panels, different markup etc.)
exploit markup (ex: giving more weight to similarities found in the title or in tables, than similarities found in plain text.
identify and eliminate domain-related (or even generally known) expressions. For example two completely different documents may appear similar is they have in common two "boiler plate" paragraphs pertaining to some legal disclaimer or some general purpose description, not truly associated with the essence of each cocument's content.
Tokenize texts, remove stop words and arrange in a term vector. Calculate tf-idf. Arrange all vectors in a matrix and calculate distances between them to find similar docs, using for example Jaccard index.
All depends on what you mean by "similar". If you mean "about the same subject", looking for matching N-grams usually works pretty well. For example, just make a map from trigrams to the text that contains them, and put all trigrams from all of your texts into that map. Then when you get your text to be matched, look up all its trigrams in your map and pick the most frequent texts that come back (perhaps with some normalization by length).
I don't know what you mean by similar, but perhaps you ought to load your texts into a search system like Lucene and pose your 'one text' to it as a query. Lucene does pre-index the texts so it can quickly find the most similar ones (by its lights) at query-time, as you asked.
You will have to define a function to measure the "difference" between two pages. I can imagine a variety of such functions, one of which you have to choose for your domain:
Difference of Keyword Sets - You can prune the document of the most common words in the dictionary, and then end up with a list of unique keywords per document. The difference funciton would then calculate the difference as the difference of the sets of keywords per document.
Difference of Text - Calculate each distance based upon the number of edits it takes to turn one doc into another using a text diffing algorithm (see Text Difference Algorithm.
Once you have a difference function, simply calculate the difference of your current doc with every other doc, then return the other doc that is closest.
If you need to do this a lot and you have a lot of documents, then the problem becomes a bit more difficult.