How can I get the output of a command into a bash variable? - bash

I can't remember how to capture the result of an execution into a variable in a bash script.
Basically I have a folder full of backup files of the following format:
backup--my.hostname.com--1309565.tar.gz
I want to loop over a list of all files and pull the numeric part out of the filename and do something with it, so I'm doing this so far:
HOSTNAME=`hostname`
DIR="/backups/"
SUFFIX=".tar.gz"
PREFIX="backup--$HOSTNAME--"
TESTNUMBER=9999999999
#move into the backup dir
cd $DIR
#get a list of all backup files in there
FILES=$PREFIX*$SUFFIX
#Loop over the list
for F in $FILES
do
#rip the number from the filename
NUMBER=$F | sed s/$PREFIX//g | sed s/$SUFFIX//g
#compare the number with another number
if [ $NUMBER -lg $TESTNUMBER ]
#do something
fi
done
I know the "$F | sed s/$PREFIX//g | sed s/$SUFFIX//g" part rips the number correctly (though I appreciate there might be a better way of doing this), but I just can't remember how to get that result into NUMBER so I can reuse it in the if statement below.

Use the $(...) syntax (or ``).
NUMBER=$( echo $F | sed s/$PREFIX//g | sed s/$SUFFIX//g )
or
NUMBER=` echo $F | sed s/$PREFIX//g | sed s/$SUFFIX//g `
(I prefer the first one, since it is easier to see when multiple ones nest.)

Backticks if you want to be portable to older shells (sh):
NUMBER=`$F | sed s/$PREFIX//g | sed s/$SUFFIX//g`.
Otherwise, use NUMBER=$($F | sed s/$PREFIX//g | sed s/$SUFFIX//g). It's better and supports nesting more readily.

Related

1. How to use the input not including the first one 2.Using grep and sed to find the pattern entered by the user and how to create the next line

The command that I'm making wants the first input to be a file and search how many times a certain pattern occurs within the file, using grep and sed.
Ex:
$ cat file1
oneonetwotwotwothreefourfive
Intended output:
$ ./command file1 one two three
one 2
two 3
three 1
The problem is the file does not have any lines and is just a long list of letters. I'm trying to use sed to replace the pattern I'm looking for with "FIND" and move the list to the next line and this continues until the end of file. Then, use $grep FIND to get the line that contains FIND. Finally, use wc -l to find a number of lines. However, I cannot find the option to move the list to the next line
Ex:
$cat file1
oneonetwosixone
Intended output:
FIND
FIND
twosixFIND
Another problem that I've been having is how to use the rest of the input, not including the file.
Failed attempt:
file=$1
for PATTERN in 2 3 4 5 ... N
do
variable=$(sed 's/$PATTERN/find/g' $file | grep FIND $file | wc -l)
echo $PATTERN $variable
exit
Another failed attempt:
file=$1
PATTERN=$($2,$3 ... $N)
for PATTERN in $*
do variable=$(sed 's/$PATTERN/FIND/g' $file | grep FIND $file | wc-1)
echo $PATTERN $variable
exit
Any suggestions and help will be greatly appreciated. Thank you in advance.
Non-portable solution with GNU grep:
file=$1
shift
for pattern in "$#"; do
echo "$pattern" $(grep -o -e "$pattern" <"$file" | wc -l)
done
If you want to use sed and your "patterns" are actually fixed strings (which don't contain characters that have special meaning to sed), you could do something like:
file=$1
shift
for pattern in "$#"; do
echo "$pattern" $(
sed "s/$pattern/\n&\n/g" "$file" |\
grep -e "$pattern" | wc -l
)
done
Your code has several issues:
you should quote use of variables where word splitting may happen
don't use ALLCAPS variable names - they are reserved for use by the shell
if you put a string in single-quotes, variable expansion does not happen
if you give grep a file, it won't read standard input
your for loop has no terminating done
This might work for you (GNU bash,sed and uniq):
f(){ local file=$1;
shift;
local args="$#";
sed -E 's/'${args// /|}'/\n&\n/g
s/(\n\S+)\n\S+/\1/g
s/\n+/\n/g
s/.(.*)/echo "\1"|uniq -c/e
s/ *(\S+) (\S+)/\2 \1/mg' $file; }
Separate arguments into file and remaining arguments.
Apply arguments as alternation within a sed substitution command which splits words into lines separated by a newline either side.
Remove unwanted words and unwanted newlines.
Evaluate the manufactured file within a sed substitution using the uniq command with the -c option.
Rearrange the output and print the result.
The problem is the file does not have any lines
Great! So the problem reduces to putting newlines.
func() {
file=$1
shift
rgx=$(printf "%s\\|" "$#" | sed 's#\\|$##');
# put the newline between words
sed 's/\('"$rgx"'\)/&\n/g' "$file" |
# it's just standard here
sort | uniq -c |
# filter only input - i.e. exclude fourfive
grep -xf <(printf " *[0-9]\+ %s\n" "$#")
};
func <(echo oneonetwotwotwothreefourfive) one two three
outputs:
2 one
1 three
3 two

More universal alternative to this sed command?

I have a variable called $dirs storing directories in a dir tree:
root/animals/rats/mice
root/animals/cats
And I have another variable called $remove for example that holds the names of the directories I want to remove from the dirs variable:
rats
crabs
I am using a for loop to do that:
for d in $remove; do
dirs=$(echo "$dirs" | sed "/\b$d\b/d")
done
After that loop is done, what I should be left with is:
root/animals/cats
because the loop found rats.
I have tested this approach on 3 systems but it only works as expected on 2.
Is there a more universal approach that would work on all shells?
You are looking for something like
echo "${dirs}" | grep -Ev "rats|crabs"
When you can't store the exclusion list in the format with |, try to change it on the fly:"
echo "${dirs}" | grep -Ev $(echo "${remove}" | tr -s "\n" "|" | sed 's/|$//')
You can use the excludeFile technique without a temp file with
echo "${dirs}" | grep -vf <(echo "${remove}")
I am not sure which of there solutions will be best supported.

echo prints too many spaces

I have code with two variables in echo. I don't know why it prints spaces before $NEXT even though I have just one space in code.
NEXT=$(find "${DIR}" -type f -name "*.$ext" | sed "s/.*\/\.//g" | sed "s/.*\///g" |
sed -n '/.*\..*/p' | wc -l)
echo "Files .$ext: $NEXT"
Files .tar: 1
Your find expression is not doing what you think it is:
NEXT=$(find "${DIR}" -type f -name "*.$ext" | sed "s/.*\/\.//g" | sed "s/.*\///g" |
sed -n '/.*\..*/p' | wc -l)
When you pipe to wc -l you are left with a Number. The format of the number will depend on your distributions default compile options for wc. While generally when information is piped or redirected to wc the value returned should be without any leading whitespace (but there is no guarantee that your install of wc will work that way). All you can do it test and see what results, e.g.
ls "$HOME" | wc -l
If whitespace is returned before the value -- you have found your problem.
If the last line is the output, then it seems it is an output of something else than displayed code. When your output looks weird, try putting single quotes around each variable:
echo " Average file size .'$ext': '$AEXT'"
That way, you will know, if the spaces (or tabs) are coming from the variables themselves or from the script.

Bash: displaying wc with three digit output?

conducting a word count of a directory.
ls | wc -l
if output is "17", I would like the output to display as "017".
I have played with | printf with little luck.
Any suggestions would be appreciated.
printf is the way to go to format numbers:
printf "There were %03d files\n" "$(ls | wc -l)"
ls | wc -l will tell you how many lines it encountered parsing the output of ls, which may not be the same as the number of (non-dot) filenames in the directory. What if a filename has a newline? One reliable way to get the number of files in a directory is
x=(*)
printf '%03d\n' "${#x[#]}"
But that will only work with a shell that supports arrays. If you want a POSIX compatible approach, use a shell function:
countargs() { printf '%03d\n' $#; }
countargs *
This works because when a glob expands the shell maintains the words in each member of the glob expansion, regardless of the characters in the filename. But when you pipe a filename the command on the other side of the pipe can't tell it's anything other than a normal string, so it can't do any special handling.
You coud use sed.
ls | wc -l | sed 's/^17$/017/'
And this applies to all the two digit numbers.
ls | wc -l | sed '/^[0-9][0-9]$/s/.*/0&/'

select nth file in folder (using sed)?

I am trying to select the nth file in a folder of which the filename matches a certain pattern:
Ive tried using this with sed: e.g.,
sed -n 3p /path/to/files/pattern.txt
but it appears to return the 3rd line of the first matching file.
Ive also tried
sed -n 3p ls /path/to/files/*pattern*.txt
which doesnt work either.
Thanks!
Why sed, when bash is so much better at it?
Assuming some name n indicates the index you want:
Bash
files=(path/to/files/*pattern*.txt)
echo "${files[n]}"
Posix sh
i=0
for file in path/to/files/*pattern*.txt; do
if [ $i = $n ]; then
break
fi
i=$((i++))
done
echo "$file"
What's wrong with sed is that you would have to jump through many hoops to make it safe for the entire set of possible characters that can occur in a filename, and even if that doesn't matter to you you end up with a double-layer of subshells to get the answer.
file=$(printf '%s\n' path/to/files/*pattern*.txt | sed -n "$n"p)
Please, never parse ls.
ls -1 /path/to/files/*pattern*.txt | sed -n '3p'
or, if patterne is a regex pattern
ls -1 /path/to/files/ | egrep 'pattern' | sed -n '3p'
lot of other possibilities, it depend on performance or simplicity you look at

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