Sorry, but this is getting on my nerves...
Exactly when i start loading a table through hive, I start getting this error. And dear old google is not able to help either.
my situation -
single node setup. Namenode working properly.
datanode startup is failing with this message -
ERROR datanode.DataNode: org.apache.hadoop.hdfs.server.common.InconsistentFSStateException: Directory /xxxxxx/hadoop/hdfs-data-dir is in an inconsistent state: is incompatible with others.
I have already tried to re-format my namenode, but it doesnt help.
Also, I tried to find ways to "format" my datanode, but no success so far..
help please...
This site pointed me at a solution after a drive got reformatted:
I ran into a problem with hadoop where it wouldn’t startup after I
reformatted a drive. To fix this make sure the VERSION number is the
same across all hadoop directories
md5sum /hadoop/sd*/dfs/data/current/VERSION
If they aren’t the same version across all partitions, then you will
get the error.
I simply copied the VERSION information from one of the other drives, changed permissions, and restarted HDFS.
Found a fix.
Needed to
create a fresh hdfs directory,
remove the write permissions from the group (chmod g-w xxxx) and
remove all temporary files from /tmp pertaining to hadoop/hdfs.
I am convinced that there could/would be a better/cleaner way to fix this.
still keeping the question open therefore.
Related
Seeing error message
Job setup failed : org.apache.hadoop.security.AccessControlException: Permission denied: user=airflow, access=WRITE, inode="/":hdfs:hdfs:drwxr-xr-x at org.apache.hadoop.hdfs.server.namenode.FSPermissionChecker.check(FSPermissionChecker.java:399) at ...
when trying to connect to start the h2o cluster (h2o-3.28.0.1-hdp3.1). Ie it appears that it does not like that the root hdfs dir hdfs:/// does not have write permissions for my user (and giving write access to my user via ranger does appear to fix the problem), but this seems wrong.
From past experience, I've seen this for case where the launching user does not have write permissions the their own hdfs:///user/<username> folder, but seems odd to me that h2o wants the user to have write access over the entire top level hdfs dir. Is this normal? Can I change this?
Possibly related: Finding that after starting the cluster, can't manually kill in YARN ResourceManager UI or killing the PID, rather need to go to the h2o cluster url and use the admin tab to shutdown the cluster. Any ideas why this would happen?
Found the problem, can't find the docs / other-post-detailing-this right now, but basically, when running the hadoop jar h2odriver.jar ... command, there is an optional param called -output where you would normally put some hdfs location that h2o will write stuff (from what I can recall, this is some legacy directory that is not super important) to.
I had forgotten that this is an HDFS location and put some local temp folder's absolute path. The error was because h2o was trying to create that folder by creating the entire path in hdfs that lead to it, thus requiring being able to write from the hdfs root dir. The correct value would be something like /user/<username>.
Have pipeline in NiFi of the form listHDFS->moveHDFS, attempting to run the pipeline we see the error log
13:29:21 HSTDEBUG01631000-d439-1c41-9715-e0601d3b971c
ListHDFS[id=01631000-d439-1c41-9715-e0601d3b971c] Returning CLUSTER State: StandardStateMap[version=43, values={emitted.timestamp=1525468790000, listing.timestamp=1525468790000}]
13:29:21 HSTDEBUG01631000-d439-1c41-9715-e0601d3b971c
ListHDFS[id=01631000-d439-1c41-9715-e0601d3b971c] Found new-style state stored, latesting timestamp emitted = 1525468790000, latest listed = 1525468790000
13:29:21 HSTDEBUG01631000-d439-1c41-9715-e0601d3b971c
ListHDFS[id=01631000-d439-1c41-9715-e0601d3b971c] Fetching listing for /hdfs/path/to/dir
13:29:21 HSTERROR01631000-d439-1c41-9715-e0601d3b971c
ListHDFS[id=01631000-d439-1c41-9715-e0601d3b971c] Failed to perform listing of HDFS due to File /hdfs/path/to/dir does not exist: java.io.FileNotFoundException: File /hdfs/path/to/dir does not exist
Changing the listHDFS path to /tmp seems to run ok, thus making me think that the problem is with my permissions on the directory I'm trying to list. However, changing the NiFi user to a user that can access that directory (eg. hadoop fs -ls /hdfs/path/to/dir) by setting the bootstrap.properties value run.as=myuser and restarting (see https://nifi.apache.org/docs/nifi-docs/html/administration-guide.html#bootstrap_properties) still seems to produce the same problem for the directory. The literal dir. string being used that is not working is:
"/etl/ucera_internal/datagov_example/raw-ingest-tracking/version-1/ingest"
Does anyone know what is happening here? Thanks.
** Note: The hadoop cluster I am accessing does not have kerberos enabled (it is a secured MapR hadoop cluster).
Update: It appears that the mapr hadoop implementation is different enough that it requires special steps in order for NiFi to properly work on it (see https://community.mapr.com/thread/10484 and http://hariology.com/integrating-mapr-fs-and-apache-nifi/). May not get a chance to work on this problem for some time to see if still works (as certain requirements have changed), so am dumping the link here for others who may have this problem in the meantime.
Could you once make sure you have entered correct path and directory needs to be exists in HDFS.
It seems to be list hdfs processor not able to find the directory that you have configured in directory property and logs are not showing any permission denied issues.
If logs shows permission denied then you can change the nifi running user in bootstrap.conf and
Once you make change in nifi properties then NiFi needs to restart to apply the changes (or) change the permissions on the directory that NiFi can have access.
I am new to Hadoop and am trying to execute the WordCount Problem.
Things I did so far -
Setting up the Hadoop Single Node cluster referring the below link.
http://www.bogotobogo.com/Hadoop/BigData_hadoop_Install_on_ubuntu_single_node_cluster.php
Write the word count problem referring the below link
https://kishorer.in/2014/10/22/running-a-wordcount-mapreduce-example-in-hadoop-2-4-1-single-node-cluster-in-ubuntu-14-04-64-bit/
Problem is when I execute the last line to run the program -
hadoop jar wordcount.jar /usr/local/hadoop/input /usr/local/hadoop/output
Following is the error I get -
The directory seems to be present
The file is also present in the directory with contents
Finally, on a side note I also tried the following directory sturcture in the jar command.
No avail! :/
I would really appreciate if someone could guide me here!
Regards,
Paul Alwin
Your first image is using input from the local Hadoop installation directory, /usr
If you want to use that data on your local filesystem, you can specify file:///usr/...
Otherwise, if you're running pseudo distributed mode, HDFS has been setup, and /usr does not exist in HDFS unless you explicitly created it there.
Based on the stacktrace, I believe the error comes from the /app/hadoop/ staging directory path not existing, or the permissions for it are not allowing your current user to run commands against that path
Suggestion: Hortonworks and Cloudera offer pre-built VirtualBox images and lots of tutorial resources. Most companies will have Hadoop from one of those vendors, so it's better to get familiar with that rather than mess around with having to install Hadoop yourself from scratch, in my opinion
I was trying to run a long running Spark Job. After few hours of execution, I get exception below :
Caused by: java.io.IOException: Failed to create local dir in /tmp/blockmgr-bb765fd4-361f-4ee4-a6ef-adc547d8d838/28
Tried to get around it by checking:
Permission issue in /tmp dir. The spark server is not running as root. but /tmp dir should be writable to all users.
/tmp Dir has enough space.
Assuming that you are working with several nodes, you'll need to check every node participate in the spark operation (master/driver + slaves/nodes/workers).
Please confirm that each worker/node have enough disk space (especially check /tmp folder), and right permissions.
Edit: The answer below did not eventually solve my case. It's because some subfolders spark (or some of its dependencies) was able to create, yet not all of them. The frequent necessity of creation of such paths would make any project unviable. Therefore I ran Spark (PySpark in my case) as an Administrator, which solved the case. So in the end it is probably a permission issue afterall.
Original answer:
I solved the same problem I had on my local Windows machine (not a cluster). Since there was no problem with permissions, I created the dir that Spark was failing to create, i.e. I created the following folder as a local user and did not need to change any permissions on that folder.
C:\Users\<username>\AppData\Local\Temp\blockmgr-97439a5f-45b0-4257-a773-2b7650d17142
After verifying all the permissions and user access.
I got the same issue when building the components in Talend studio and it resolved by providing the correct "/" in spark scratch directory (temp directory) in spark Configuration tab. This is required when building the jar in windows and running in Linux cluster.
I have zero experience with Hadoop, but suddenly have to use it at work with Spark on Windows. My question, which has been asked a few times here, but I never could quite get the syntax for what I need, is this. I'm trying to transfer a simple file called:
gensortText.txt which let's say is at c:\gensortText.txt
I know you can use hadoop fs -copyFromLocal. I've tried these things:
hadoop fs -copyFromLocal C:\gensortText.txt hdfs://0.0.0.0:19000
ERROR: Relative path in absolute URI.
hadoop fs -copyFromLocal C:\gensortOutText.txt \tmp\hadoop-Administrator\dfs
ERROR: copyFromLocal: `tmphadoop-Administratordfs': No such file or directory
and a number of other variations with hdfs: and using the tmp directory which all returned similar errors.
I have hadoop in c:\deploy as suggested in the Hadoop2Windows guide (which works and allowed me to run Hadoop. I can access the WebGui and all that). Hadoop has created my new HDFS at c:\temp. Please someone help me figure out how to transfer files into the system. It can even be manually if that's possible, but that doesn't seem to work as it doesn't show up in the Web GUI when I go to "Utilities->Browse the Filesystem". Nothing shows up there actually.
Can someone please help. Any information that's relevant I can provide, but I'm so new to this I don't really know what would be helpful. I think it's just my syntax for the cmdline tool. Can someone give me a concrete example of how to use hadoop -fs copyFromLocal or another simple way to do this? Sorry for my ignorance on the subject, and thanks for any help
To be able to run hadoop commands on Windows you need to have winutils installed and visible to hadoop process.