Edit: this is not a duplicate of Determine if an image exists within a larger image, and if so, find it, using Python since I do not know the pattern beforehand
Suppose I have a big image (usually a picture taken with a camera so it might be a bit noisy, but let's assume it's not for now) made up of multiple smaller images all equal among themselves, something like
I need to find the contour of each one of those. The first step is recognizing that there's a recurring image (or unknown pattern) in the 2D image. How can I achieve this first step?
I did read around that I might use a FFT of the original image and search for duplicate frequencies, would that be a feasible approach?
To build a bit on the problem: I do not know the image beforehand, nor its size or how many will there be on the big image. The images can be shot from camera so they might be noisy. The images won't overlap.
You can try to use described keypoints (Sift/SURF/ORB/etc.) to find features in the image and try to detect the same features in the image.
You can see such a result in How to find euclidean distance between keypoints of a single image in opencv where 3x the same image is present and features are detected and linked between those subimages automatically.
In your image the result looks like
so you can see that the different occurances of the same pattern is indeed automatically detected and linked.
Next steps would be to group features to objects, so that the "whole" pattern can be extracted. Once you have a candidate for a pattern, you can extract a homography for each occurance of the pattern (with one reference candidate pattern) to verify that it is a pattern. One open problem is how to find such candidates. Maybe it is worth trying to find "parallel features", so keypoint matches that have parallel lines and/or same length lines (see image). Or maybe there is some graph theory approach.
All in all, this whole approach will have some advantages and disadvantes:
Advantages:
real world applicability - Sift and other keypoints are working quite well even with noise and some perspective effects, so chances are increased to find such patterns.
Disadvantages
slow
parametric (define what it means that two features are successfully
matched)
not suitable for all kind of patterns - your pattern must have some extractable keypoints
Those are some thoughts and probably not complete ;)
Unfortunately no full code yet for your concrete task, but I hope the idea is clear.
For such a clean image, it suffices to segment the patterns by blob analysis and to compare the segments or ROI that contain them. The size is a first matching criterion. The SAD, SSD or correlation similarity scores can do finer comparison.
In practice you will face more difficulties such as
not possible to segment the patterns
geometric variations in size/orientation
partial occlusion
...
Handling these is out of the scope of this answer; it makes things much harder than in the "toy" case.
The goal is to find several equal or very similar patterns which are not known before in a picture. As it is this problem is still a bit ill posed.
Are the patterns exactly equal or only similar (added noise maybe)?
Do you want to have the largest possible patterns or are smaller subpatterns okay too or are all possible patterns needed? Reason is that of course each pattern could consist of equal patterns too.
Is the background always that simple (completely white) or can it be much more difficult? What do we know about it?
Are the patterns always equally oriented, equally scaled, non-overlapping?
For the simple case of non-overlapping patterns with simple background, the answer of Yves Daoust using segmentation is well performing but fails if patterns are very close or overlapping.
For other cases the idea of the keypoints by Micka will help but might not perform well if there is noise or might be slow.
I have one alternative: look at correlations of subblocks of the image.
In pseudocode:
Divide the image in overlapping areas of size MxN for a suitable M,N (pixel width and height chosen to be approximately the size of the desired pattern)
Correlate each subblock with the whole image. Look for local maxima in the correlation. The position of these maxima denotes the position of similar regions.
Choose a global threshold on all correlations (smartly somehow) and find sets of equal patterns.
Determine the fine structure of these patterns by shanging the shape from rectangular (bounding box) to a more sophisticaed shape (maybe by looking at the shape of the peaks in the correlation)
In case the approximate size of the desired patterns is not known before, try with large values of M, N and go down to smaller ones.
To speed up the whole process start on a coarse scale (downscaled version of the image) and then process finer scales only where needed. Needs balancing of zooming in and performing correlations.
Sorry, I cannot make this a full Matlab project right now, but I hope this helps you.
I want to detect some elements in an Image.
For this goal, i get the image and the specified element (like a nose) and from Pixel(0,0) start to search for my element.
But the software performance is awful because i traverse the pixels one by one.
I think i need some smart algorithm for this problem.
And maybe the machine learning algorithm useful for this.
What's your idea?
I would start with viola jones object detection framework.
This is a supervised learning technique, that allows you to detect any kind of object with high provavility.
(even though the article mainly refers to faces, but it is designed for general objects..).
If you chose this approach - your main chore is going to be to obtain a classified training set. You can later evaluate how good your algorithm is using cross-validation.
AFAIK, it is implemented in OpenCV library (I am not familiar with the library to offer help)
You can do a very fast cross correlation using the Fourier transformation of your image and search pattern
A good implementation is for example OpenCV's matchTemplate function
This will work best if your pattern always has the same rotation and scale accross your image.
If it does not, you can repeat the search with several scaled/rotated versions of your pattern.
One advantage of this approach is that no training phase is required.
Another, simpler approach that would work in particular with your pattern is this:
Use connected component labeling to identify blobs with the right number of white pixels to be the center rectangle of your element. This will eliminate all but a few false positives. Concentrate your search on the remaining few spots.
Again OpenCV has a nice Blob library for that sort of stuff.
If you're looking for simple geometric shapes in computer-generated images like the example you provided, then you don't need to bother with machine learning.
For example, here's one of the components you're trying to find in the original image:
(Image removed by request)
Assuming this component is always drawn at the same dimensions, the top and bottom lines are always going to be 21 pixels apart. You can narrow down your search space considerably by combining this image with a copy of itself shifted vertically by 21 pixels, and taking the lighter of the two images as the pixel value at each position.
(Image removed by request)
Similarly, the vertical lines at the left and right of this component are 47 pixels apart, so we can repeat this process with a 47px horizontal shift. This results in a vertical bar about 24px tall at the position of the component.
(Image removed by request)
You can detect these bars quite easily by looking for runs of black pixels between 22 and 26 pixels long in the vertical columns of the processed image. This will provide you with a short list of candidate positions where you can check for the presence of this component more thoroughly, e.g. by calculating a local 2D cross correlation.
Here are the results after processing the whole image. Reaching this stage should only take a few milliseconds.
(Image removed by request)
Imagine we have a simple 2D drawing, filled it with lots of non-overlapping circles and only a few stars.
If we are to find all the stars among all these circles, I can think of very few methods. Brute force is one of them. Another one is possibly reduce the image size (to the optimal point where you can still distinguish the objects apart) and then apply brute force and map to the original image. The drawback of brute force is of course, it is very time consuming. I am looking for faster methods, possibly the fastest one.
What is the fastest image processing method to search for the specified item on a simple 2D image?
One typical way of looking for an object in an image is through cross correlation. Basically, you look for the position where the cross-correlation between a mask (the object you're attempting to find) and the image is the highest. That position is the likely location of the object you're trying to find.
For the sake of simplicity, I will refer to the object you're attempting to find as a star, but in general it can be any shape.
Some problems with the above approach:
The size of the mask has to match the size of the star. If you don't know the size of the star, then you will have to try different size masks. Image pyramids are more effective than just iteratively trying different size masks, but still require extra effort.
Similarly, the orientations of the mask and the star have to match. If they don't, the cross-correlation won't work.
For these reasons, the more you know about your problem, the simpler it becomes. This is the reason why people have asked you for more information in the comments. A general purpose solution doesn't really exist, to the best of my knowledge. Maybe someone more knowledgeable can correct me on this.
As you've mentioned, reducing the size of the image will help you reduce the computational time of your approach. In my opinion, it's hardly the core element of a solution -- it's just an optional optimization step.
If the shapes are easy to segment from the background, you might be able to compute distinguishing shape/color descriptors. Depending on your problem you could choose descriptors that are invariant to scale, translation or rotation (e.g. compactness, if it is unique to each shape). I do not know if this will be faster, though.
If you already know the exact shape and have an idea about the size, you might want to have a look at the Generalized Hough Transform, which is basically a formalized description of your "brute force algorithm"
As you list a property that the shapes are not overlapping then I assume an efficient algorithm would be able to
cut out all the shapes by scanning the image in some way (I can imagine relatively efficient and simple algorithm for convex shapes)
when you are left with cut out shapes you could use cross relation misha mentioned
You should describe the problem a bit better
can the shapes be rotated or scaled (or some other transform?)
is the background uniform colour
are the shapes uniform colour
are the shapes filled
Depending on the answer on the above questions you might have more less or more simple solutions.
Also, maybe this article might be interesting.
If the shapes are very regular maybe turning them into vectors could fit your needs nicely, but it might be an overkill, really depends what you want to do later.
Step 1: Thresholding - reduce the image to 1 bit (black or white) if the general image set permits it. [For the type of example you cite, my guess is thresholding would work nicely - leaving enough details to find objects].
Step 2: Optionally do some smoothing/noise removal.
Step 3: Use some clustering approach to gather the foreground objects.
Step 4: Use an appropriate heuristic to identify the objects.
The parameters in steps 1/2 will depend a lot on the type of images as well as experimentation/observation. 3 is usually straightforward if you have worked out 1/2 correctly. 4 will depend very much on the problem (for example, in your case identifying stars - which would depend on what is the actual shape of the stars expected in the images).
Given two different image files (in whatever format I choose), I need to write a program to predict the chance if one being the illegal copy of another. The author of the copy may do stuff like rotating, making negative, or adding trivial details (as well as changing the dimension of the image).
Do you know any algorithm to do this kind of job?
These are simply ideas I've had thinking about the problem, never tried it but I like thinking about problems like this!
Before you begin
Consider normalising the pictures, if one is a higher resolution than the other, consider the option that one of them is a compressed version of the other, therefore scaling the resolution down might provide more accurate results.
Consider scanning various prospective areas of the image that could represent zoomed portions of the image and various positions and rotations. It starts getting tricky if one of the images are a skewed version of another, these are the sort of limitations you should identify and compromise on.
Matlab is an excellent tool for testing and evaluating images.
Testing the algorithms
You should test (at the minimum) a large human analysed set of test data where matches are known beforehand. If for example in your test data you have 1,000 images where 5% of them match, you now have a reasonably reliable benchmark. An algorithm that finds 10% positives is not as good as one that finds 4% of positives in our test data. However, one algorithm may find all the matches, but also have a large 20% false positive rate, so there are several ways to rate your algorithms.
The test data should attempt to be designed to cover as many types of dynamics as possible that you would expect to find in the real world.
It is important to note that each algorithm to be useful must perform better than random guessing, otherwise it is useless to us!
You can then apply your software into the real world in a controlled way and start to analyse the results it produces. This is the sort of software project which can go on for infinitum, there are always tweaks and improvements you can make, it is important to bear that in mind when designing it as it is easy to fall into the trap of the never ending project.
Colour Buckets
With two pictures, scan each pixel and count the colours. For example you might have the 'buckets':
white
red
blue
green
black
(Obviously you would have a higher resolution of counters). Every time you find a 'red' pixel, you increment the red counter. Each bucket can be representative of spectrum of colours, the higher resolution the more accurate but you should experiment with an acceptable difference rate.
Once you have your totals, compare it to the totals for a second image. You might find that each image has a fairly unique footprint, enough to identify matches.
Edge detection
How about using Edge Detection.
(source: wikimedia.org)
With two similar pictures edge detection should provide you with a usable and fairly reliable unique footprint.
Take both pictures, and apply edge detection. Maybe measure the average thickness of the edges and then calculate the probability the image could be scaled, and rescale if necessary. Below is an example of an applied Gabor Filter (a type of edge detection) in various rotations.
Compare the pictures pixel for pixel, count the matches and the non matches. If they are within a certain threshold of error, you have a match. Otherwise, you could try reducing the resolution up to a certain point and see if the probability of a match improves.
Regions of Interest
Some images may have distinctive segments/regions of interest. These regions probably contrast highly with the rest of the image, and are a good item to search for in your other images to find matches. Take this image for example:
(source: meetthegimp.org)
The construction worker in blue is a region of interest and can be used as a search object. There are probably several ways you could extract properties/data from this region of interest and use them to search your data set.
If you have more than 2 regions of interest, you can measure the distances between them. Take this simplified example:
(source: per2000.eu)
We have 3 clear regions of interest. The distance between region 1 and 2 may be 200 pixels, between 1 and 3 400 pixels, and 2 and 3 200 pixels.
Search other images for similar regions of interest, normalise the distance values and see if you have potential matches. This technique could work well for rotated and scaled images. The more regions of interest you have, the probability of a match increases as each distance measurement matches.
It is important to think about the context of your data set. If for example your data set is modern art, then regions of interest would work quite well, as regions of interest were probably designed to be a fundamental part of the final image. If however you are dealing with images of construction sites, regions of interest may be interpreted by the illegal copier as ugly and may be cropped/edited out liberally. Keep in mind common features of your dataset, and attempt to exploit that knowledge.
Morphing
Morphing two images is the process of turning one image into the other through a set of steps:
Note, this is different to fading one image into another!
There are many software packages that can morph images. It's traditionaly used as a transitional effect, two images don't morph into something halfway usually, one extreme morphs into the other extreme as the final result.
Why could this be useful? Dependant on the morphing algorithm you use, there may be a relationship between similarity of images, and some parameters of the morphing algorithm.
In a grossly over simplified example, one algorithm might execute faster when there are less changes to be made. We then know there is a higher probability that these two images share properties with each other.
This technique could work well for rotated, distorted, skewed, zoomed, all types of copied images. Again this is just an idea I have had, it's not based on any researched academia as far as I am aware (I haven't look hard though), so it may be a lot of work for you with limited/no results.
Zipping
Ow's answer in this question is excellent, I remember reading about these sort of techniques studying AI. It is quite effective at comparing corpus lexicons.
One interesting optimisation when comparing corpuses is that you can remove words considered to be too common, for example 'The', 'A', 'And' etc. These words dilute our result, we want to work out how different the two corpus are so these can be removed before processing. Perhaps there are similar common signals in images that could be stripped before compression? It might be worth looking into.
Compression ratio is a very quick and reasonably effective way of determining how similar two sets of data are. Reading up about how compression works will give you a good idea why this could be so effective. For a fast to release algorithm this would probably be a good starting point.
Transparency
Again I am unsure how transparency data is stored for certain image types, gif png etc, but this will be extractable and would serve as an effective simplified cut out to compare with your data sets transparency.
Inverting Signals
An image is just a signal. If you play a noise from a speaker, and you play the opposite noise in another speaker in perfect sync at the exact same volume, they cancel each other out.
(source: themotorreport.com.au)
Invert on of the images, and add it onto your other image. Scale it/loop positions repetitively until you find a resulting image where enough of the pixels are white (or black? I'll refer to it as a neutral canvas) to provide you with a positive match, or partial match.
However, consider two images that are equal, except one of them has a brighten effect applied to it:
(source: mcburrz.com)
Inverting one of them, then adding it to the other will not result in a neutral canvas which is what we are aiming for. However, when comparing the pixels from both original images, we can definatly see a clear relationship between the two.
I haven't studied colour for some years now, and am unsure if the colour spectrum is on a linear scale, but if you determined the average factor of colour difference between both pictures, you can use this value to normalise the data before processing with this technique.
Tree Data structures
At first these don't seem to fit for the problem, but I think they could work.
You could think about extracting certain properties of an image (for example colour bins) and generate a huffman tree or similar data structure. You might be able to compare two trees for similarity. This wouldn't work well for photographic data for example with a large spectrum of colour, but cartoons or other reduced colour set images this might work.
This probably wouldn't work, but it's an idea. The trie datastructure is great at storing lexicons, for example a dictionarty. It's a prefix tree. Perhaps it's possible to build an image equivalent of a lexicon, (again I can only think of colours) to construct a trie. If you reduced say a 300x300 image into 5x5 squares, then decompose each 5x5 square into a sequence of colours you could construct a trie from the resulting data. If a 2x2 square contains:
FFFFFF|000000|FDFD44|FFFFFF
We have a fairly unique trie code that extends 24 levels, increasing/decreasing the levels (IE reducing/increasing the size of our sub square) may yield more accurate results.
Comparing trie trees should be reasonably easy, and could possible provide effective results.
More ideas
I stumbled accross an interesting paper breif about classification of satellite imagery, it outlines:
Texture measures considered are: cooccurrence matrices, gray-level differences, texture-tone analysis, features derived from the Fourier spectrum, and Gabor filters. Some Fourier features and some Gabor filters were found to be good choices, in particular when a single frequency band was used for classification.
It may be worth investigating those measurements in more detail, although some of them may not be relevant to your data set.
Other things to consider
There are probably a lot of papers on this sort of thing, so reading some of them should help although they can be very technical. It is an extremely difficult area in computing, with many fruitless hours of work spent by many people attempting to do similar things. Keeping it simple and building upon those ideas would be the best way to go. It should be a reasonably difficult challenge to create an algorithm with a better than random match rate, and to start improving on that really does start to get quite hard to achieve.
Each method would probably need to be tested and tweaked thoroughly, if you have any information about the type of picture you will be checking as well, this would be useful. For example advertisements, many of them would have text in them, so doing text recognition would be an easy and probably very reliable way of finding matches especially when combined with other solutions. As mentioned earlier, attempt to exploit common properties of your data set.
Combining alternative measurements and techniques each that can have a weighted vote (dependant on their effectiveness) would be one way you could create a system that generates more accurate results.
If employing multiple algorithms, as mentioned at the begining of this answer, one may find all the positives but have a false positive rate of 20%, it would be of interest to study the properties/strengths/weaknesses of other algorithms as another algorithm may be effective in eliminating false positives returned from another.
Be careful to not fall into attempting to complete the never ending project, good luck!
Read the paper: Porikli, Fatih, Oncel Tuzel, and Peter Meer. “Covariance Tracking Using Model Update Based
on Means on Riemannian Manifolds”. (2006) IEEE Computer Vision and Pattern Recognition.
I was successfully able to detect overlapping regions in images captured from adjacent webcams using the technique presented in this paper. My covariance matrix was composed of Sobel, canny and SUSAN aspect/edge detection outputs, as well as the original greyscale pixels.
An idea:
use keypoint detectors to find scale- and transform- invariant descriptors of some points in the image (e.g. SIFT, SURF, GLOH, or LESH).
try to align keypoints with similar descriptors from both images (like in panorama stitching), allow for some image transforms if necessary (e.g. scale & rotate, or elastic stretching).
if many keypoints align well (exists such a transform, that keypoint alignment error is low; or transformation "energy" is low, etc.), you likely have similar images.
Step 2 is not trivial. In particular, you may need to use a smart algorithm to find the most similar keypoint on the other image. Point descriptors are usually very high-dimensional (like a hundred parameters), and there are many points to look through. kd-trees may be useful here, hash lookups don't work well.
Variants:
Detect edges or other features instead of points.
It is indeed much less simple than it seems :-) Nick's suggestion is a good one.
To get started, keep in mind that any worthwhile comparison method will essentially work by converting the images into a different form -- a form which makes it easier to pick similar features out. Usually, this stuff doesn't make for very light reading ...
One of the simplest examples I can think of is simply using the color space of each image. If two images have highly similar color distributions, then you can be reasonably sure that they show the same thing. At least, you can have enough certainty to flag it, or do more testing. Comparing images in color space will also resist things such as rotation, scaling, and some cropping. It won't, of course, resist heavy modification of the image or heavy recoloring (and even a simple hue shift will be somewhat tricky).
http://en.wikipedia.org/wiki/RGB_color_space
http://upvector.com/index.php?section=tutorials&subsection=tutorials/colorspace
Another example involves something called the Hough Transform. This transform essentially decomposes an image into a set of lines. You can then take some of the 'strongest' lines in each image and see if they line up. You can do some extra work to try and compensate for rotation and scaling too -- and in this case, since comparing a few lines is MUCH less computational work than doing the same to entire images -- it won't be so bad.
http://homepages.inf.ed.ac.uk/amos/hough.html
http://rkb.home.cern.ch/rkb/AN16pp/node122.html
http://en.wikipedia.org/wiki/Hough_transform
In the form described by you, the problem is tough. Do you consider copy, paste of part of the image into another larger image as a copy ? etc.
What we loosely refer to as duplicates can be difficult for algorithms to discern.
Your duplicates can be either:
Exact Duplicates
Near-exact Duplicates. (minor edits of image etc)
perceptual Duplicates (same content, but different view, camera etc)
No1 & 2 are easier to solve. No 3. is very subjective and still a research topic.
I can offer a solution for No1 & 2.
Both solutions use the excellent image hash- hashing library: https://github.com/JohannesBuchner/imagehash
Exact duplicates
Exact duplicates can be found using a perceptual hashing measure.
The phash library is quite good at this. I routinely use it to clean
training data.
Usage (from github site) is as simple as:
from PIL import Image
import imagehash
# image_fns : List of training image files
img_hashes = {}
for img_fn in sorted(image_fns):
hash = imagehash.average_hash(Image.open(image_fn))
if hash in img_hashes:
print( '{} duplicate of {}'.format(image_fn, img_hashes[hash]) )
else:
img_hashes[hash] = image_fn
Near-Exact Duplicates
In this case you will have to set a threshold and compare the hash values for their distance from each
other. This has to be done by trial-and-error for your image content.
from PIL import Image
import imagehash
# image_fns : List of training image files
img_hashes = {}
epsilon = 50
for img_fn1, img_fn2 in zip(image_fns, image_fns[::-1]):
if image_fn1 == image_fn2:
continue
hash1 = imagehash.average_hash(Image.open(image_fn1))
hash2 = imagehash.average_hash(Image.open(image_fn2))
if hash1 - hash2 < epsilon:
print( '{} is near duplicate of {}'.format(image_fn1, image_fn2) )
If you take a step-back, this is easier to solve if you watermark the master images.
You will need to use a watermarking scheme to embed a code into the image. To take a step back, as opposed to some of the low-level approaches (edge detection etc) suggested by some folks, a watermarking method is superior because:
It is resistant to Signal processing attacks
► Signal enhancement – sharpening, contrast, etc.
► Filtering – median, low pass, high pass, etc.
► Additive noise – Gaussian, uniform, etc.
► Lossy compression – JPEG, MPEG, etc.
It is resistant to Geometric attacks
► Affine transforms
► Data reduction – cropping, clipping, etc.
► Random local distortions
► Warping
Do some research on watermarking algorithms and you will be on the right path to solving your problem. (
Note: You can benchmark you method using the STIRMARK dataset. It is an accepted standard for this type of application.
This is just a suggestion, it might not work and I'm prepared to be called on this.
This will generate false positives, but hopefully not false negatives.
Resize both of the images so that they are the same size (I assume that the ratios of widths to lengths are the same in both images).
Compress a bitmap of both images with a lossless compression algorithm (e.g. gzip).
Find pairs of files that have similar file sizes. For instance, you could just sort every pair of files you have by how similar the file sizes are and retrieve the top X.
As I said, this will definitely generate false positives, but hopefully not false negatives. You can implement this in five minutes, whereas the Porikil et. al. would probably require extensive work.
I believe if you're willing to apply the approach to every possible orientation and to negative versions, a good start to image recognition (with good reliability) is to use eigenfaces: http://en.wikipedia.org/wiki/Eigenface
Another idea would be to transform both images into vectors of their components. A good way to do this is to create a vector that operates in x*y dimensions (x being the width of your image and y being the height), with the value for each dimension applying to the (x,y) pixel value. Then run a variant of K-Nearest Neighbours with two categories: match and no match. If it's sufficiently close to the original image it will fit in the match category, if not then it won't.
K Nearest Neighbours(KNN) can be found here, there are other good explanations of it on the web too: http://en.wikipedia.org/wiki/K-nearest_neighbor_algorithm
The benefits of KNN is that the more variants you're comparing to the original image, the more accurate the algorithm becomes. The downside is you need a catalogue of images to train the system first.
If you're willing to consider a different approach altogether to detecting illegal copies of your images, you could consider watermarking. (from 1.4)
...inserts copyright information into the digital object without the loss of quality. Whenever the copyright of a digital object is in question, this information is extracted to identify the rightful owner. It is also possible to encode the identity of the original buyer along with the identity of the copyright holder, which allows tracing of any unauthorized copies.
While it's also a complex field, there are techniques that allow the watermark information to persist through gross image alteration: (from 1.9)
... any signal transform of reasonable strength cannot remove the watermark. Hence a pirate willing to remove the watermark will not succeed unless they debase the document too much to be of commercial interest.
of course, the faq calls implementing this approach: "...very challenging" but if you succeed with it, you get a high confidence of whether the image is a copy or not, rather than a percentage likelihood.
If you're running Linux I would suggest two tools:
align_image_stack from package hugin-tools - is a commandline program that can automatically correct rotation, scaling, and other distortions (it's mostly intended for compositing HDR photography, but works for video frames and other documents too). More information: http://hugin.sourceforge.net/docs/manual/Align_image_stack.html
compare from package imagemagick - a program that can find and count the amount of different pixels in two images. Here's a neat tutorial: http://www.imagemagick.org/Usage/compare/ uising the -fuzz N% you can increase the error tolerance. The higher the N the higher the error tolerance to still count two pixels as the same.
align_image_stack should correct any offset so the compare command will actually have a chance of detecting same pixels.