Pig: error while union the result of mapreduce - hadoop

Pig script
base = load 'u.base' as (uid:long, gid:long, pref:double);
sim1 = mapreduce 'mahout-core-0.7-job.jar'
store base into 'input'
load 'output' as (gid1:long, gid2:long, sim:double)
`org.apache.mahout.cf.taste.hadoop.similarity.item.ItemSimilarityJob -i input -o output -s SIMILARITY_EUCLIDEAN_DISTANCE`;
sim2 = foreach sim1 generate gid2 as gid1, gid1 as gid2, sim;
sim3 = union sim1,sim2;
dump sim3;
Pig output
2013-03-28 09:21:32,564 [main] INFO org.apache.pig.tools.pigstats.ScriptState - Pig features used in the script: UNION,NATIVE
2013-03-28 09:21:32,676 [main] INFO org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MRCompiler - File concatenation threshold: 100 optimistic? false
2013-03-28 09:21:32,699 [main] INFO org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MultiQueryOptimizer - MR plan size before optimization: 4
2013-03-28 09:21:32,702 [main] ERROR org.apache.pig.tools.grunt.Grunt - ERROR 2127: Internal Error: Cloning of plan failed for optimization.
Details at logfile: /home/chenwl/logs/pig_1364433685680.log
Pig log
Pig Stack Trace
---------------
ERROR 2127: Internal Error: Cloning of plan failed for optimization.
org.apache.pig.impl.logicalLayer.FrontendException: ERROR 1066: Unable to open iterator for alias sim3
at org.apache.pig.PigServer.openIterator(PigServer.java:836)
at org.apache.pig.tools.grunt.GruntParser.processDump(GruntParser.java:696)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.parse(PigScriptParser.java:320)
at org.apache.pig.tools.grunt.GruntParser.loadScript(GruntParser.java:531)
at org.apache.pig.tools.grunt.GruntParser.processScript(GruntParser.java:480)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.Script(PigScriptParser.java:804)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.parse(PigScriptParser.java:449)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:194)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:170)
at org.apache.pig.tools.grunt.Grunt.run(Grunt.java:69)
at org.apache.pig.Main.run(Main.java:538)
at org.apache.pig.Main.main(Main.java:157)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.apache.hadoop.util.RunJar.main(RunJar.java:156)
Caused by: org.apache.pig.PigException: ERROR 1002: Unable to store alias sim3
at org.apache.pig.PigServer.storeEx(PigServer.java:935)
at org.apache.pig.PigServer.store(PigServer.java:898)
at org.apache.pig.PigServer.openIterator(PigServer.java:811)
... 16 more
Caused by: org.apache.pig.impl.plan.optimizer.OptimizerException: ERROR 2127: Internal Error: Cloning of plan failed for optimization.
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MultiQueryOptimizer.mergeDiamondMROper(MultiQueryOptimizer.java:304)
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MultiQueryOptimizer.visitMROp(MultiQueryOptimizer.java:219)
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MapReduceOper.visit(MapReduceOper.java:273)
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MapReduceOper.visit(MapReduceOper.java:46)
at org.apache.pig.impl.plan.ReverseDependencyOrderWalker.walk(ReverseDependencyOrderWalker.java:71)
at org.apache.pig.impl.plan.PlanVisitor.visit(PlanVisitor.java:46)
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MultiQueryOptimizer.visit(MultiQueryOptimizer.java:94)
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MapReduceLauncher.compile(MapReduceLauncher.java:617)
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MapReduceLauncher.launchPig(MapReduceLauncher.java:146)
at org.apache.pig.PigServer.launchPlan(PigServer.java:1264)
at org.apache.pig.PigServer.executeCompiledLogicalPlan(PigServer.java:1249)
at org.apache.pig.PigServer.storeEx(PigServer.java:931)
... 18 more
Caused by: java.lang.CloneNotSupportedException: Unable to find clone for op 1-36: Native('hadoop jar mahout-core-0.7-job.jar org.apache.mahout.cf.taste.hadoop.similarity.item.ItemSimilarityJob -i input -o output -s SIMILARITY_EUCLIDEAN_DISTANCE ') - scope-12
at org.apache.pig.backend.hadoop.executionengine.physicalLayer.plans.PhysicalPlan.clone(PhysicalPlan.java:273)
at org.apache.pig.backend.hadoop.executionengine.mapReduceLayer.MultiQueryOptimizer.mergeDiamondMROper(MultiQueryOptimizer.java:298)
... 29 more
================================================================================
Environment
OS: ubuntu 12.04
Hadoop: 1.0.4 Subversion https://svn.apache.org/repos/asf/hadoop/common/branches/branch-1.0 -r 1393290
Pig: 0.11.0 (r1446324)
P.S.:
It works if sim1 was loaded from hdfs, e.g. sim1 = load 'sim' as (gid1:long, gid2:long, sim:double).

Related

Unable to load an file from ADLS(azure Datalake) to Hive table

When ever i am tring to load a file from my azure datalake storage to an Hive table using below command,
hiveContext.sql(LOAD DATA INPATH 'adl://bienodad56872stgadlstemp.azuredatalakestore.net/Enriched/Nielsen/NielsenScantrack/Incremental_withoutRepartition/NLS_SYN_SCT.csv' OVERWRITE INTO TABLE sample.test03)
i am getting an error :ApplicationMaster: User class threw exception: java.lang.reflect.InvocationTargetException
java.lang.reflect.InvocationTargetException
Whole error Log:
17/07/05 05:45:48 INFO SparkSqlParser: Parsing command: CREATE TABLE IF NOT EXISTS sample.test03 ( GEO STRING,UPC STRING,WeekEnding STRING,BaseDollars INT,BaseDollars_AnyPromo INT,BaseDollars_Display INT,BaseDollars_FeatAndDisp INT,BaseDollars_FeatAndOrDisp INT,BaseDollars_Feature INT,BaseDollars_NoPromo INT,BaseDollars_TPR INT,BaseUnits INT,BaseUnits_AnyPromo INT,BaseUnits_Display INT,BaseUnits_EQ STRING,BaseUnits_EQ_AnyPromo STRING,BaseUnits_EQ_Display STRING,BaseUnits_EQ_FeatAndDisp STRING,BaseUnits_EQ_FeatAndOrDisp STRING,BaseUnits_EQ_Feature STRING,BaseUnits_EQ_NoPromo STRING,BaseUnits_EQ_TPR STRING,BaseUnits_FeatAndDisp INT,BaseUnits_FeatAndOrDisp INT,BaseUnits_Feature INT,BaseUnits_NoPromo INT,BaseUnits_TPR INT,Dollars INT,Dollars_AnyPromo INT,Dollars_Display INT,Dollars_FeatAndDisp INT,Dollars_FeatAndOrDisp INT,Dollars_Feature INT,Dollars_NoPromo INT,Dollars_TPR INT,PACV_Discount INT,PACV_DispWOFeat INT,PACV_FeatAndDisp INT,PACV_FeatWODisp INT,Units INT,Units_AnyPromo INT,Units_Display INT,Units_EQ INT,Units_EQ_AnyPromo STRING,Units_EQ_Display STRING,Units_EQ_FeatAndDisp STRING,Units_EQ_FeatAndOrDisp STRING,Units_EQ_Feature STRING,Units_EQ_NoPromo STRING,Units_EQ_TPR STRING,Units_FeatAndDisp INT,Units_FeatAndOrDisp INT,Units_Feature INT,Units_NoPromo INT,Units_TPR INT,ACV INT ) ROW FORMAT DELIMITED FIELDS TERMINATED BY ',' STORED AS TEXTFILE
17/07/05 05:45:49 INFO SparkSqlParser: Parsing command: LOAD DATA INPATH 'adl://bienodad56872stgadlstemp.azuredatalakestore.net/Enriched/Nielsen/NielsenScantrack/Incremental_withoutRepartition/NLS_SYN_SCT.csv' OVERWRITE INTO TABLE sample.test03
17/07/05 05:45:49 INFO SessionState: Could not get hdfsEncryptionShim, it is only applicable to hdfs filesystem.
17/07/05 05:45:49 INFO Hive: Replacing src:adl://bienodad56872stgadlstemp.azuredatalakestore.net/Enriched/Nielsen/NielsenScantrack/Incremental_withoutRepartition/NLS_SYN_SCT.csv, dest: wasb://bieno-da-d-56872-unilevercom-hdi-01#049bienobrunilevercomstg.blob.core.windows.net/hive/warehouse/sample.db/test03/NLS_SYN_SCT.csv, Status:false
17/07/05 05:45:49 ERROR ApplicationMaster: User class threw exception: java.lang.reflect.InvocationTargetException
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.sql.hive.client.Shim_v0_14.loadTable(HiveShim.scala:633)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$loadTable$1.apply$mcV$sp(HiveClientImpl.scala:646)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$loadTable$1.apply(HiveClientImpl.scala:646)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$loadTable$1.apply(HiveClientImpl.scala:646)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$withHiveState$1.apply(HiveClientImpl.scala:280)
at org.apache.spark.sql.hive.client.HiveClientImpl.liftedTree1$1(HiveClientImpl.scala:227)
at org.apache.spark.sql.hive.client.HiveClientImpl.retryLocked(HiveClientImpl.scala:226)
at org.apache.spark.sql.hive.client.HiveClientImpl.withHiveState(HiveClientImpl.scala:269)
at org.apache.spark.sql.hive.client.HiveClientImpl.loadTable(HiveClientImpl.scala:645)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$loadTable$1.apply$mcV$sp(HiveExternalCatalog.scala:248)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$loadTable$1.apply(HiveExternalCatalog.scala:246)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$loadTable$1.apply(HiveExternalCatalog.scala:246)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:72)
at org.apache.spark.sql.hive.HiveExternalCatalog.loadTable(HiveExternalCatalog.scala:246)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.loadTable(SessionCatalog.scala:297)
at org.apache.spark.sql.execution.command.LoadDataCommand.run(tables.scala:335)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:58)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:56)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.doExecute(commands.scala:74)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:115)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:115)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$executeQuery$1.apply(SparkPlan.scala:136)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.sql.execution.SparkPlan.executeQuery(SparkPlan.scala:133)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:114)
at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:86)
at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:86)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:186)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:167)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:65)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:582)
at org.apache.spark.sql.SQLContext.sql(SQLContext.scala:682)
at com.accenture.Unilever.Nielsen.RestatementSample.Restatement(RestatementSample.scala:70)
at com.accenture.Unilever.StageToEnrich.RestatementLogic$.main(RestatementLogic.scala:36)
at com.accenture.Unilever.StageToEnrich.RestatementLogic.main(RestatementLogic.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$2.run(ApplicationMaster.scala:627)
Caused by: org.apache.hadoop.hive.ql.metadata.HiveException: Error moving: adl://bienodad56872stgadlstemp.azuredatalakestore.net/Enriched/Nielsen/NielsenScantrack/Incremental_withoutRepartition/NLS_SYN_SCT.csv into: wasb://bieno-da-d-56872-unilevercom-hdi-01#049bienobrunilevercomstg.blob.core.windows.net/hive/warehouse/sample.db/test03/NLS_SYN_SCT.csv
at org.apache.hadoop.hive.ql.metadata.Hive.replaceFiles(Hive.java:2919)
at org.apache.hadoop.hive.ql.metadata.Hive.loadTable(Hive.java:1640)
... 44 more
Caused by: java.io.IOException: Error moving: adl://bienodad56872stgadlstemp.azuredatalakestore.net/Enriched/Nielsen/NielsenScantrack/Incremental_withoutRepartition/NLS_SYN_SCT.csv into: wasb://bieno-da-d-56872-unilevercom-hdi-01#049bienobrunilevercomstg.blob.core.windows.net/hive/warehouse/sample.db/test03/NLS_SYN_SCT.csv
at org.apache.hadoop.hive.ql.metadata.Hive.replaceFiles(Hive.java:2913)
... 45 more
I can execute the same code from HIVE shell but from spark script i am getting this error. Is there any special Jar file i need to include. Any help will be appreciated.

pig ERROR 1200: null when using fs commands

while running pig in mapreduce mode im occuring really strange error.
The pigscript.pig contains....
x= load 'hdfs://file.avro' USING AvroStorage();
some transofrmations...
fs mv src/file dest/file;
up to this point all works fine, but script continues as
y = load 'hdfs://file2.avro' USING AvroStorage();
While executed previous command i got error bellow. I double check and the file2.avro is there ... stored in the HDFS.
When I quit pig and re-run the code from the line
y = load 'hdfs://file2.avro' USING AvroStorage();
all works fine.
Any idea?
Pig Stack Trace
---------------
ERROR 1200: null
Failed to parse: null
at org.apache.pig.parser.QueryParserDriver.parse(QueryParserDriver.java:201)
at org.apache.pig.PigServer$Graph.validateQuery(PigServer.java:1707)
at org.apache.pig.PigServer$Graph.registerQuery(PigServer.java:1680)
at org.apache.pig.PigServer.registerQuery(PigServer.java:623)
at org.apache.pig.tools.grunt.GruntParser.processPig(GruntParser.java:1063)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.parse(PigScriptParser.java:501)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:230)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:205)
at org.apache.pig.tools.grunt.Grunt.run(Grunt.java:66)
at org.apache.pig.Main.run(Main.java:558)
at org.apache.pig.Main.main(Main.java:170)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.util.RunJar.run(RunJar.java:221)
at org.apache.hadoop.util.RunJar.main(RunJar.java:136)
Caused by: java.lang.NullPointerException
at org.apache.pig.builtin.AvroStorage.getAvroSchema(AvroStorage.java:298)
at org.apache.pig.builtin.AvroStorage.getAvroSchema(AvroStorage.java:282)
at org.apache.pig.builtin.AvroStorage.getSchema(AvroStorage.java:256)
at org.apache.pig.newplan.logical.relational.LOLoad.getSchemaFromMetaData(LOLoad.java:175)
at org.apache.pig.newplan.logical.relational.LOLoad.<init>(LOLoad.java:89)
at org.apache.pig.parser.LogicalPlanBuilder.buildLoadOp(LogicalPlanBuilder.java:901)
at org.apache.pig.parser.LogicalPlanGenerator.load_clause(LogicalPlanGenerator.java:3568)
at org.apache.pig.parser.LogicalPlanGenerator.op_clause(LogicalPlanGenerator.java:1625)
at org.apache.pig.parser.LogicalPlanGenerator.general_statement(LogicalPlanGenerator.java:1102)
at org.apache.pig.parser.LogicalPlanGenerator.statement(LogicalPlanGenerator.java:560)
at org.apache.pig.parser.LogicalPlanGenerator.query(LogicalPlanGenerator.java:421)
at org.apache.pig.parser.QueryParserDriver.parse(QueryParserDriver.java:191)
... 16 more
================================================================================

java.io.IOException: Job status not available about hive

When I use hive with select * from table_name;, it works.
When I use select t.a from table_name t OR select * from table_name where ..., the following error happens :
Total MapReduce jobs = 1
Launching Job 1 out of 1
Number of reduce tasks is set to 0 since there's no reduce operator
Starting Job = job_1414949555870_118360, Tracking URL = N/A
Kill Command = /usr/local/hadoop-2.5.1/bin/hadoop job -kill job_1414949555870_118360
java.io.IOException: Job status not available
at org.apache.hadoop.mapreduce.Job.updateStatus(Job.java:322)
at org.apache.hadoop.mapreduce.Job.getJobState(Job.java:347)
at org.apache.hadoop.mapred.JobClient$NetworkedJob.getJobState(JobClient.java:295)
at org.apache.hadoop.hive.shims.HadoopShimsSecure.isJobPreparing(HadoopShimsSecure.java:104)
at org.apache.hadoop.hive.ql.exec.mr.HadoopJobExecHelper.progress(HadoopJobExecHelper.java:242)
at org.apache.hadoop.hive.ql.exec.mr.HadoopJobExecHelper.progress(HadoopJobExecHelper.java:541)
at org.apache.hadoop.hive.ql.exec.mr.ExecDriver.execute(ExecDriver.java:431)
at org.apache.hadoop.hive.ql.exec.mr.MapRedTask.execute(MapRedTask.java:136)
at org.apache.hadoop.hive.ql.exec.Task.executeTask(Task.java:151)
at org.apache.hadoop.hive.ql.exec.TaskRunner.runSequential(TaskRunner.java:65)
at org.apache.hadoop.hive.ql.Driver.launchTask(Driver.java:1485)
at org.apache.hadoop.hive.ql.Driver.execute(Driver.java:1263)
at org.apache.hadoop.hive.ql.Driver.runInternal(Driver.java:1091)
at org.apache.hadoop.hive.ql.Driver.run(Driver.java:931)
at org.apache.hadoop.hive.ql.Driver.run(Driver.java:921)
at org.apache.hadoop.hive.cli.CliDriver.processLocalCmd(CliDriver.java:268)
at org.apache.hadoop.hive.cli.CliDriver.processCmd(CliDriver.java:220)
at org.apache.hadoop.hive.cli.CliDriver.processLine(CliDriver.java:422)
at org.apache.hadoop.hive.cli.CliDriver.executeDriver(CliDriver.java:790)
at org.apache.hadoop.hive.cli.CliDriver.run(CliDriver.java:684)
at org.apache.hadoop.hive.cli.CliDriver.main(CliDriver.java:623)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.util.RunJar.main(RunJar.java:212)
Ended Job = job_1414949555870_118360 with exception java.io.IOException(Job status not available )
FAILED: Execution Error, return code 1 from org.apache.hadoop.hive.ql.exec.mr.MapRedTask`
So, what's wrong about hive?
DEBUG info as follow, maybe useful!! Please help me!!!
15/04/14 16:53:48 DEBUG ipc.Client: getting client out of cache: org.apache.hadoop.ipc.Client#60cb201b
15/04/14 16:53:48 DEBUG mapred.ClientServiceDelegate: Failed to contact AM/History for job job_1414949555870_118441 retrying..
java.net.UnknownHostException: Invalid host name: local host is: (unknown); destination host is: "slave109":43759; java.net.UnknownHostException; For more details see: http://wiki.apache.org/hadoop/UnknownHost

how to run illustrate command in pig?

I tried to run illustrate command on alias in pig in both local and hdfs mode also.
But i am getting below error.
2014-08-27 19:18:06,703 [main] ERROR
org.apache.pig.pen.ExampleGenerator - Error reading data. Internal
error creating job configuration. java.lang.RuntimeException: Internal
error creating job configuration.
at org.apache.pig.pen.ExampleGenerator.getExamples(ExampleGenerator.java:160)
at org.apache.pig.PigServer.getExamples(PigServer.java:1182)
at org.apache.pig.tools.grunt.GruntParser.processIllustrate(GruntParser.java:739)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.Illustrate(PigScriptParser.java:626)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.parse(PigScriptParser.java:323)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:194)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:170)
at org.apache.pig.tools.grunt.Grunt.run(Grunt.java:69)
at org.apache.pig.Main.run(Main.java:538)
at org.apache.pig.Main.main(Main.java:157)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.util.RunJar.main(RunJar.java:208) 2014-08-27 19:18:06,707 [main] ERROR org.apache.pig.tools.grunt.Grunt
- ERROR 2997: Encountered IOException. Exception Details at logfile: /opt/pig_1409147241095.log
I am running Illustrate command using this example.
Say the input file is 'visits.txt' containing the following data :
Amy cnn.com 20070218 Fred harvard.edu 20071204 Amy
bbc.com 20071205 Fred stanford.edu 20071206
A grunt session might look something like this (Note the use of schemas while loading data. ExampleGenerator needs you to provide aliases) :
grunt> visits = load 'visits.txt' as (user, url, timestamp);
grunt> recent_visits = filter visits by timestamp >= '20071201';
grunt> user_visits = group recent_visits by user;
grunt> num_user_visits = foreach user_visits generate group, COUNT(recent_visits);
grunt> illustrate num_user_visits
set pig.enable.plan.serialization=false on /etc/pig/conf/pig.properties

apache thrift transport TTransportException

Hive Version : 0.13.1
Pig Version : 0.13.0
I was trying to get read the hive tables using pig with the below command.
grunt> DATA = LOAD 'dev.profile' USING org.apache.hcatalog.pig.HCatLoader();
I get the below piece of log
2014-07-16 22:44:58,986 [main] WARN org.apache.hadoop.hive.conf.HiveConf - DEPRECATED: hive.metastore.ds.retry.* no longer has any effect. Use hive.hmshandler.retry.* instead
2014-07-16 22:44:59,037 [main] INFO hive.metastore - Trying to connect to metastore with URI thrift://localhost:10000
2014-07-16 22:44:59,057 [main] INFO hive.metastore - Connected to metastore.
2014-07-16 22:45:02,019 [main] WARN org.apache.hadoop.hive.conf.HiveConf - DEPRECATED: hive.metastore.ds.retry.* no longer has any effect. Use hive.hmshandler.retry.* instead
2014-07-16 22:45:02,166 [main] WARN org.apache.hadoop.hive.conf.HiveConf - DEPRECATED: hive.metastore.ds.retry.* no longer has any effect. Use hive.hmshandler.retry.* instead
when i do the describe the results comes properly as expected.
grunt> describe DATA
2014-07-16 22:46:42,189 [main] WARN org.apache.hadoop.hive.conf.HiveConf - DEPRECATED: hive.metastore.ds.retry.* no longer has any effect. Use hive.hmshandler.retry.* instead
DATA: {name: chararray,age: int,salary: int}
but when i dump the data i get SocketTimeoutException
2014-07-16 22:47:25,146 [main] ERROR hive.log - Got exception: org.apache.thrift.transport.TTransportException java.net.SocketTimeoutException: Read timed out
org.apache.thrift.transport.TTransportException: java.net.SocketTimeoutException: Read timed out
at org.apache.thrift.transport.TIOStreamTransport.read(TIOStreamTransport.java:129)
at org.apache.thrift.transport.TTransport.readAll(TTransport.java:84)
at org.apache.thrift.protocol.TBinaryProtocol.readAll(TBinaryProtocol.java:378)
at org.apache.thrift.protocol.TBinaryProtocol.readI32(TBinaryProtocol.java:297)
at org.apache.thrift.protocol.TBinaryProtocol.readMessageBegin(TBinaryProtocol.java:204)
at org.apache.thrift.TServiceClient.receiveBase(TServiceClient.java:69)
at org.apache.hadoop.hive.metastore.api.ThriftHiveMetastore$Client.recv_get_databases(ThriftHiveMetastore.java:600)
at org.apache.hadoop.hive.metastore.api.ThriftHiveMetastore$Client.get_databases(ThriftHiveMetastore.java:587)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.getDatabases(HiveMetaStoreClient.java:826)
at org.apache.hcatalog.common.HiveClientCache$CacheableHiveMetaStoreClient.isOpen(HiveClientCache.java:276)
at org.apache.hcatalog.common.HiveClientCache.get(HiveClientCache.java:146)
at org.apache.hcatalog.common.HCatUtil.getHiveClient(HCatUtil.java:548)
at org.apache.hcatalog.pig.PigHCatUtil.getHiveMetaClient(PigHCatUtil.java:158)
at org.apache.hcatalog.pig.PigHCatUtil.getTable(PigHCatUtil.java:200)
at org.apache.hcatalog.pig.HCatLoader.getSchema(HCatLoader.java:195)
at org.apache.pig.newplan.logical.relational.LOLoad.getSchemaFromMetaData(LOLoad.java:175)
at org.apache.pig.newplan.logical.relational.LOLoad.<init>(LOLoad.java:89)
at org.apache.pig.parser.LogicalPlanBuilder.buildLoadOp(LogicalPlanBuilder.java:885)
at org.apache.pig.parser.LogicalPlanGenerator.load_clause(LogicalPlanGenerator.java:3568)
at org.apache.pig.parser.LogicalPlanGenerator.op_clause(LogicalPlanGenerator.java:1625)
at org.apache.pig.parser.LogicalPlanGenerator.general_statement(LogicalPlanGenerator.java:1102)
at org.apache.pig.parser.LogicalPlanGenerator.statement(LogicalPlanGenerator.java:560)
at org.apache.pig.parser.LogicalPlanGenerator.query(LogicalPlanGenerator.java:421)
at org.apache.pig.parser.QueryParserDriver.parse(QueryParserDriver.java:188)
at org.apache.pig.PigServer$Graph.parseQuery(PigServer.java:1712)
at org.apache.pig.PigServer$Graph.access$000(PigServer.java:1420)
at org.apache.pig.PigServer.storeEx(PigServer.java:1004)
at org.apache.pig.PigServer.store(PigServer.java:974)
at org.apache.pig.PigServer.openIterator(PigServer.java:887)
at org.apache.pig.tools.grunt.GruntParser.processDump(GruntParser.java:752)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.parse(PigScriptParser.java:372)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:228)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:203)
at org.apache.pig.tools.grunt.Grunt.run(Grunt.java:66)
at org.apache.pig.Main.run(Main.java:542)
at org.apache.pig.Main.main(Main.java:156)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.util.RunJar.main(RunJar.java:160)
Caused by: java.net.SocketTimeoutException: Read timed out
at java.net.SocketInputStream.socketRead0(Native Method)
at java.net.SocketInputStream.read(SocketInputStream.java:152)
at java.net.SocketInputStream.read(SocketInputStream.java:122)
at java.io.BufferedInputStream.fill(BufferedInputStream.java:235)
at java.io.BufferedInputStream.read1(BufferedInputStream.java:275)
at java.io.BufferedInputStream.read(BufferedInputStream.java:334)
at org.apache.thrift.transport.TIOStreamTransport.read(TIOStreamTransport.java:127)
... 40 more
2014-07-16 22:47:25,148 [main] ERROR hive.log - Converting exception to MetaException
2014-07-16 22:47:25,151 [main] INFO hive.metastore - Trying to connect to metastore with URI thrift://localhost:10000
2014-07-16 22:47:25,152 [main] INFO hive.metastore - Connected to metastore.
2014-07-16 22:47:45,173 [main] ERROR org.apache.pig.PigServer - exception during parsing: Error during parsing. Cannot get schema from loadFunc org.apache.hcatalog.pig.HCatLoader
Failed to parse: Can not retrieve schema from loader org.apache.hcatalog.pig.HCatLoader#1342464f
at org.apache.pig.parser.QueryParserDriver.parse(QueryParserDriver.java:198)
at org.apache.pig.PigServer$Graph.parseQuery(PigServer.java:1712)
at org.apache.pig.PigServer$Graph.access$000(PigServer.java:1420)
at org.apache.pig.PigServer.storeEx(PigServer.java:1004)
at org.apache.pig.PigServer.store(PigServer.java:974)
at org.apache.pig.PigServer.openIterator(PigServer.java:887)
at org.apache.pig.tools.grunt.GruntParser.processDump(GruntParser.java:752)
at org.apache.pig.tools.pigscript.parser.PigScriptParser.parse(PigScriptParser.java:372)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:228)
at org.apache.pig.tools.grunt.GruntParser.parseStopOnError(GruntParser.java:203)
at org.apache.pig.tools.grunt.Grunt.run(Grunt.java:66)
at org.apache.pig.Main.run(Main.java:542)
at org.apache.pig.Main.main(Main.java:156)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.util.RunJar.main(RunJar.java:160)
Caused by: java.lang.RuntimeException: Can not retrieve schema from loader org.apache.hcatalog.pig.HCatLoader#1342464f
at org.apache.pig.newplan.logical.relational.LOLoad.<init>(LOLoad.java:91)
at org.apache.pig.parser.LogicalPlanBuilder.buildLoadOp(LogicalPlanBuilder.java:885)
at org.apache.pig.parser.LogicalPlanGenerator.load_clause(LogicalPlanGenerator.java:3568)
at org.apache.pig.parser.LogicalPlanGenerator.op_clause(LogicalPlanGenerator.java:1625)
at org.apache.pig.parser.LogicalPlanGenerator.general_statement(LogicalPlanGenerator.java:1102)
at org.apache.pig.parser.LogicalPlanGenerator.statement(LogicalPlanGenerator.java:560)
at org.apache.pig.parser.LogicalPlanGenerator.query(LogicalPlanGenerator.java:421)
at org.apache.pig.parser.QueryParserDriver.parse(QueryParserDriver.java:188)
... 17 more
Caused by: org.apache.pig.impl.logicalLayer.FrontendException: ERROR 2245: Cannot get schema from loadFunc org.apache.hcatalog.pig.HCatLoader
at org.apache.pig.newplan.logical.relational.LOLoad.getSchemaFromMetaData(LOLoad.java:179)
at org.apache.pig.newplan.logical.relational.LOLoad.<init>(LOLoad.java:89)
... 24 more
Caused by: java.io.IOException: org.apache.thrift.transport.TTransportException: java.net.SocketTimeoutException: Read timed out
at org.apache.hcatalog.pig.PigHCatUtil.getTable(PigHCatUtil.java:205)
at org.apache.hcatalog.pig.HCatLoader.getSchema(HCatLoader.java:195)
at org.apache.pig.newplan.logical.relational.LOLoad.getSchemaFromMetaData(LOLoad.java:175)
... 25 more
Caused by: org.apache.thrift.transport.TTransportException: java.net.SocketTimeoutException: Read timed out
at org.apache.thrift.transport.TIOStreamTransport.read(TIOStreamTransport.java:129)
at org.apache.thrift.transport.TTransport.readAll(TTransport.java:84)
at org.apache.thrift.protocol.TBinaryProtocol.readAll(TBinaryProtocol.java:378)
at org.apache.thrift.protocol.TBinaryProtocol.readI32(TBinaryProtocol.java:297)
at org.apache.thrift.protocol.TBinaryProtocol.readMessageBegin(TBinaryProtocol.java:204)
at org.apache.thrift.TServiceClient.receiveBase(TServiceClient.java:69)
at org.apache.hadoop.hive.metastore.api.ThriftHiveMetastore$Client.recv_get_table(ThriftHiveMetastore.java:1036)
at org.apache.hadoop.hive.metastore.api.ThriftHiveMetastore$Client.get_table(ThriftHiveMetastore.java:1022)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.getTable(HiveMetaStoreClient.java:997)
at org.apache.hcatalog.common.HCatUtil.getTable(HCatUtil.java:194)
at org.apache.hcatalog.pig.PigHCatUtil.getTable(PigHCatUtil.java:201)
... 27 more
Caused by: java.net.SocketTimeoutException: Read timed out
at java.net.SocketInputStream.socketRead0(Native Method)
at java.net.SocketInputStream.read(SocketInputStream.java:152)
at java.net.SocketInputStream.read(SocketInputStream.java:122)
at java.io.BufferedInputStream.fill(BufferedInputStream.java:235)
at java.io.BufferedInputStream.read1(BufferedInputStream.java:275)
at java.io.BufferedInputStream.read(BufferedInputStream.java:334)
at org.apache.thrift.transport.TIOStreamTransport.read(TIOStreamTransport.java:127)
... 37 more
2014-07-16 22:47:45,176 [main] ERROR org.apache.pig.tools.grunt.Grunt - ERROR 2245: Cannot get schema from loadFunc org.apache.hcatalog.pig.HCatLoader
Even though i am able to connect to metastore i am not able to retrieve the data. What could be the reason for read fail ?
and at times the process fails with java.lang.OutOfMemoryError: Java heap space
Any help would be greatly appreciated.
Edit the hive-site.xml.
Replace hive.metastore.ds.retry with /hive.hmshandler.retry.
vim /usr/local/Cellar/hive/0.13.1/libexec/conf/hive-site.xml
:%s/hive.metastore.ds.retry/hive.hmshandler.retry/g
:wq

Resources