Joomla 2.5 Template Configuration Error - joomla

This is my first experiment with Joomla (2.5) and I am having trouble figuring out what is not configured correctly between the two.
I started with the template and all was good but then as I was configuring / adding content I must have changed something.
The two areas in question is the "top movies" section at the bottom and the "Latest News", Recent News tabs.
Looking at the html in developer tools I can clearly see the difference but I can't figure out what to do / change / look at in the Joomla admin.
The original template is here:
http://temp.lamplighterguild.com/
The one I eventually want to go live with is here:
http://take7.lamplighterguild.com/
I'm not sure what else to post but if you'll just educate me more on what I can provide I'll be happy to update / edit.
Thank You
Edit
Elin you were most helpful pointing me in the right direction. What I found was that another module I was using Code 7 Responsive Slider jquery was colliding with the templates jquery. If I disable the Code 7 slider the jquery carousel and jquery tabs are back to the original.
So now I am off to figure out how to get them to play nice...including using another slider if needed. FWIW I need the images to be href links and that was not readily available using the default slider that came with the template so I grabbed another slider.
Put your comment in some form of an answer and I will mark it for you.
Thanks again.

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It sounds like the responsive design hides them on purpose.
Just from a quick peek at your code using inspect element I can see that the class "slideshow hidden-xs" gets a display:none on smaller screen sizes and all of your main content is wrapped in that element. If all of your content is not supposed to be wrapped in that element (which I'm guessing it's not) you're most likely missing a closing tag on a div or something.
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yes I think that good , also you can make all items in "index.php" in template folder and make menu items link to divs by "#" plus ID .
you can add all items you want as module and you can use component in modules plugin lik :
http://extensions.joomla.org/extensions/core-enhancements/coding-a-scripts-integration/embed-a-include/18121
Hope that help you
You'd be better to insert the content via creating a bespoke module or component - putting code in the WYSIWYG area kind of defeats the point of using a CMS at all - someone with no coding skills has to be able to update the site and not accidentally delete the layout.
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