I'm trying to format output in a way that inserts newline characters after each 'line', with lines denoted by double quotes (""). The quotes themselves are temporary and to be stripped in a later step.
Input:
"a",1,"aa""b",2,"bb"
Output:
a,1,aa
b,2,bb
I've tried:
sed 's/""/\n/'
sed 's/""/\/g'
tr '""' '\n'
But tr seems to replace every quote character and sed seems to insert \n as text instead of a newline. What can I do to make this work?
echo '"a",1,"aa""b",2,"bb"' |awk -v RS='""' '{$1=$1} {gsub(/"/,"")}1'
a,1,aa
b,2,bb
or using sed:
echo '"a",1,"aa""b",2,"bb"' |sed -e 's/""/\n/' -e 's/"//g' # OR sed -e 's/""/\n/;s/"//g'
a,1,aa
b,2,bb
awk solution: Here the default record separator is changed from new line to "". So awk will consider the EOL when it hits "".
sed solution: Here first "" are converted into new line and second replacement is to remove " from each line.
neech#nicolaw.uk:~ $ cat file.txt
"a",1,"aa""b",2,"bb"
neech#nicolaw.uk:~ $ sed 's/""/\n/' file.txt | tr -d '"'
a,1,aa
b,2,bb
You seem to be dealing with POSIX sed, which does not have support for the \n notation. Insert an actual new-line into the pattern, either:
sed 's/""/\
/'
Or:
sed 's/""/\'$'\n''/'
E.g.:
sed 's/""/\
/' | tr -d \"
Output:
a,1,aa
b,2,bb
As suggested by George Vasiliou if you have perl you could use:
> echo '"a",1,"aa""b",2,"bb"' | perl -pe 's/""/"\n"/g;s/"//g'
This avoids the non portable sed problem.
Or for a crappy hack version.
Replace the "" with another character and then use tr (since tr should work with \n) to replace it with \n instead then remove the single " after.
So you can get the "" replaced with newline like this:
sed 's/""/#/g' | tr '#' '\n'
Then the rest follows:
> echo '"a",1,"aa""b",2,"bb"'| sed 's/""/#/g' | tr '#' '\n' | sed 's/\"//g'
I have a file test.txt like below spaces in between each record
service[1.1],parttion, service[1.2],parttion, service[1.3],parttion, service[2.1],parttion, service2[2.2],parttion,
Now I want to rearrange it as below into a output.txt
COMPOSITES=parttion/service/1.1,parttion/service/1.2,parttion/service/1.3,parttion/service/2.1,parttion/service/2.2
I've tried:
final_str=''
COMPOSITES=''
# Re-arranging the composites and preparing the composite property file
while read line; do
partition_val="$(echo $line | cut -d ',' -f 2)"
composite_temp1_val="$(echo $line | cut -d ',' -f 1)"
composite_val="$(echo $composite_temp1_val | cut -d '[' -f 1)"
version_temp1_val="$(echo $composite_temp1_val | cut -d '[' -f 2)"
version_val="$(echo $version_temp1_val | cut -d ']' -f 1)"
final_str="$partition_val/$composite_val/$version_val,"
COMPOSITES=$COMPOSITES$final_str
done <./temp/test.txt
We start with the file:
$ cat test.txt
service[1.1],parttion, service[1.2],parttion, service[1.3],parttion, service[2.1],parttion, service2[2.2],parttion,
We can rearrange that file as follows:
$ awk -F, -v RS=" " 'BEGIN{printf "COMPOSITES=";} {gsub(/[[]/, "/"); gsub(/[]]/, ""); if (NF>1) printf "%s%s/%s",NR==1?"":",",$2,$1;}' test.txt
COMPOSITES=parttion/service/1.1,parttion/service/1.2,parttion/service/1.3,parttion/service/2.1,parttion/service2/2.2
The same command split over multiple lines is:
awk -F, -v RS=" " '
BEGIN{
printf "COMPOSITES=";
}
{
gsub(/[[]/, "/")
gsub(/[]]/, "")
if (NF>1) printf "%s%s/%s",NR==1?"":",",$2,$1
}
' test.txt
Here's what I came up with.
awk -F '[],[]' -v RS=" " 'BEGIN{printf("COMPOSITES=")}/../{printf("%s/%s/%s,",$4,$1,$2);}' test.txt
Broken out for easier reading:
awk -F '[],[]' -v RS=" " '
BEGIN {
printf("COMPOSITES=");
}
/../ {
printf("%s/%s/%s,",$4,$1,$2);
}' test.txt
More detailed explanation of the script:
-F '[],[]' - use commas or square brackets as field separators
-v RS=" " - use just the space as a record separator
'BEGIN{printf("COMPOSITES=")} - starts your line
/../ - run the following code on any line that has at least two characters. This avoids the empty field at the end of a line terminating with a space.
printf("%s/%s/%s,",$4,$1,$2); - print the elements using a printf() format string that matches the output you specified.
As concise as this is, the format string does leave a trailing comma at the end of the line. If this is a problem, it can be avoided with a bit of extra code.
You could also do this in sed, if you like writing code in line noise.
sed -e 's:\([^[]*\).\([^]]*\).,\([^,]*\), :\3/\1/\2,:g;s/^/COMPOSITES=/;s/,$//' test.txt
Finally, if you want to avoid external tools like sed and awk, you can do this in bash alone:
a=($(<test.txt))
echo -n "COMPOSITES="
for i in "${a[#]}"; do
i="${i%,}"
t="${i%]*}"
printf "%s/%s/%s," "${i#*,}" "${i%[*}" "${t#*[}"
done
echo ""
This slurps the contents of test.txt into an array, which means your input data must be separated by whitespace, per your example. It then adds the prefix, then steps through the array, using Parameter Expansion to massage the data into the fields you need. The last line (echo "") is helpful for testing; you may want to eliminate it in practice.
My file looks like
//
[297]((((21:0.125204,20:0.125204):0.00994299,(28:0.0790047,(7:0.0146105,5:0.0146105):0.0643943):0.0561423):0.0578754,(((23:0.0386924,((((26:0.0160606,22:0.0160606):0.00378,(19:0.0160596,16:0.0160596):0.00378096):0.00242531,12:0.0222659):0.0146336,((29:0.0160393,(17:0.00712055,14:0.00712055):0.00891871):0.0195068,11:0.0355461):0.00135346):0.00179282):0.0468499,4:0.0855423):0.0451632,((25:0.059669,(30:0.0155625,13:0.0155625):0.0441064):0.0223692,(3:0.0288957,1:0.0288957):0.0531425):0.0486673):0.062317):0.60861,((((((62:0.00660739,58:0.00660739):0.011345,(70:0.00496959,54:0.00496959):0.0129828):0.0065665,((68:0.00291155,53:0.00291155):0.0178013,(66:0.0163583,((65:0.0045002,(69:0.00305355,59:0.00305355):0.00144664):0.000757378,(61:0.00311373,52:0.00311373):0.00214385):0.0111007):0.00435459):0.003806):0.123648,(76:0.0395418,(40:0.00641035,34:0.00641035):0.0331314):0.108625):0.0327298,((((46:0.00103749,42:0.00103749):0.0373456,(48:0.0259862,41:0.0259862):0.0123969):0.00173179,(47:0.0275497,39:0.0275497):0.0125652):0.106275,((((44:0.00708562,36:0.00708562):0.0773928,(37:0.025,27:0.025):0.0594785):0.00501024,18:0.0894887):0.0248315,(15:0.0649576,6:0.0649576):0.0493626):0.0320701):0.0345064):0.0680223,((((80:0.0173948,73:0.0173948):0.0162433,(67:0.0129751,((63:0.00435012,57:0.00435012):0.00727273,(60:0.00848091,(64:0.00386096,((56:0.00203231,55:0.00203231):0.00103,51:0.0030623):0.000798654):0.00461996):0.00314194):0.00135223):0.0206631):0.0296773,(33:0.0415374,((75:0.0372575,(45:0.0371022,38:0.0371022):0.000155282):0.0029007,((43:0.0101608,32:0.0101608):0.0242563,31:0.0344171):0.00574108):0.00137926):0.021778):0.147776,((((74:0.0336172,((79:0.0258073,(77:0.0203659,(78:0.00390563,72:0.00390563):0.0164602):0.00544144):0.00767555,49:0.0334829):0.000134364):0.0132633,(35:0.0137148,24:0.0137148):0.0331656):0.0721567,(10:0.0147938,8:0.0147938):0.104243):0.0343567,((71:0.0427659,50:0.0427659):0.0221428,(9:0.0467372,2:0.0467372):0.0181715):0.0884852):0.0576977):0.0378275):0.552713);
[2271]((((21:0.125204,20:0.125204):0.00994299,(28:0.0790047,(7:0.0146105,5:0.0146105):0.0643943):0.0561423):0.0578754,(((23:0.0386924,((((26:0.0160606,22:0.0160606):0.00378,(19:0.0160596,16:0.0160596):0.00378096):0.00242531,12:0.0222659):0.0146336,((29:0.0160393,(17:0.00712055,14:0.00712055):0.00891871):0.0195068,11:0.0355461):0.00135346):0.00179282):0.0468499,4:0.0855423):0.0451632,((25:0.059669,(30:0.0155625,13:0.0155625):0.0441064):0.0223692,(3:0.0288957,1:0.0288957):0.0531425):0.0486673):0.062317):0.60861,((((47:0.0363305,(((62:0.00660739,58:0.00660739):0.011345,(70:0.00496959,54:0.00496959):0.0129828):0.0065665,((68:0.00291155,53:0.00291155):0.0178013,(66:0.0163583,((65:0.0045002,(69:0.00305355,59:0.00305355):0.00144664):0.000757378,(61:0.00311373,52:0.00311373):0.00214385):0.0111007):0.00435459):0.003806):0.0118116):0.111837,(76:0.0395418,(40:0.00641035,34:0.00641035):0.0331314):0.108625):0.0327298,((((46:0.00103749,42:0.00103749):0.0373456,(48:0.0259862,41:0.0259862):0.0123969):0.00173179,39:0.0401149):0.106275,((((44:0.00708562,36:0.00708562):0.0773928,(37:0.025,27:0.025):0.0594785):0.00501024,18:0.0894887):0.0248315,(15:0.0649576,6:0.0649576):0.0493626):0.0320701):0.0345064):0.0680223,((((80:0.0173948,73:0.0173948):0.0162433,(67:0.0129751,((63:0.00435012,57:0.00435012):0.00727273,(60:0.00848091,(64:0.00386096,((56:0.00203231,55:0.00203231):0.00103,51:0.0030623):0.000798654):0.00461996):0.00314194):0.00135223):0.0206631):0.0296773,(33:0.0415374,((75:0.0372575,(45:0.0371022,38:0.0371022):0.000155282):0.0029007,((43:0.0101608,32:0.0101608):0.0242563,31:0.0344171):0.00574108):0.00137926):0.021778):0.147776,((((74:0.0336172,((79:0.0258073,(77:0.0203659,(78:0.00390563,72:0.00390563):0.0164602):0.00544144):0.00767555,49:0.0334829):0.000134364):0.0132633,(35:0.0137148,24:0.0137148):0.0331656):0.0721567,(10:0.0147938,8:0.0147938):0.104243):0.0343567,((71:0.0427659,50:0.0427659):0.0221428,(9:0.0467372,2:0.0467372):0.0181715):0.0884852):0.0576977):0.0378275):0.552713);
[687]((((21:0.125204,20:0.125204):0.00994299,(28:0.0790047,(7:0.0146105,5:0.0146105):0.0643943):0.0561423):0.0578754,((4:0.128716,(23:0.0386924,((((26:0.0160606,22:0.0160606):0.00378,(19:0.0160596,16:0.0160596):0.00378096):0.00242531,12:0.0222659):0.0146336,((29:0.0160393,(17:0.00712055,14:0.00712055):0.00891871):0.0195068,11:0.0355461):0.00135346):0.00179282):0.0900232):0.0019898,((25:0.059669,(30:0.0155625,13:0.0155625):0.0441064):0.0223692,(3:0.0288957,1:0.0288957):0.0531425):0.0486673):0.062317):0.60861,((((47:0.0363305,(((62:0.00660739,58:0.00660739):0.011345,(70:0.00496959,54:0.00496959):0.0129828):0.0065665,((68:0.00291155,53:0.00291155):0.0178013,(66:0.0163583,((65:0.0045002,(69:0.00305355,59:0.00305355):0.00144664):0.000757378,(61:0.00311373,52:0.00311373):0.00214385):0.0111007):0.00435459):0.003806):0.0118116):0.111837,(76:0.0395418,(40:0.00641035,34:0.00641035):0.0331314):0.108625):0.0327298,((((46:0.00103749,42:0.00103749):0.0373456,(48:0.0259862,41:0.0259862):0.0123969):0.00173179,39:0.0401149):0.106275,((((44:0.00708562,36:0.00708562):0.0773928,(37:0.025,27:0.025):0.0594785):0.00501024,18:0.0894887):0.0248315,(15:0.0649576,6:0.0649576):0.0493626):0.0320701):0.0345064):0.0680223,((((80:0.0173948,73:0.0173948):0.0162433,(67:0.0129751,((63:0.00435012,57:0.00435012):0.00727273,(60:0.00848091,(64:0.00386096,((56:0.00203231,55:0.00203231):0.00103,51:0.0030623):0.000798654):0.00461996):0.00314194):0.00135223):0.0206631):0.0296773,(33:0.0415374,((75:0.0372575,(45:0.0371022,38:0.0371022):0.000155282):0.0029007,((43:0.0101608,32:0.0101608):0.0242563,31:0.0344171):0.00574108):0.00137926):0.021778):0.147776,((((74:0.0336172,((79:0.0258073,(77:0.0203659,(78:0.00390563,72:0.00390563):0.0164602):0.00544144):0.00767555,49:0.0334829):0.000134364):0.0132633,(35:0.0137148,24:0.0137148):0.0331656):0.0721567,(10:0.0147938,8:0.0147938):0.104243):0.0343567,((71:0.0427659,50:0.0427659):0.0221428,(9:0.0467372,2:0.0467372):0.0181715):0.0884852):0.0576977):0.0378275):0.552713);
[186]((((21:0.125204,20:0.125204):0.00994299,(28:0.0790047,(7:0.0146105,5:0.0146105):0.0643943):0.0561423):0.0578754,((4:0.128716,(23:0.0386924,((((26:0.0160606,22:0.0160606):0.00378,(19:0.0160596,16:0.0160596):0.00378096):0.00242531,12:0.0222659):0.0146336,((29:0.0160393,(17:0.00712055,14:0.00712055):0.00891871):0.0195068,11:0.0355461):0.00135346):0.00179282):0.0900232):0.0019898,((25:0.059669,(30:0.0155625,13:0.0155625):0.0441064):0.0223692,(3:0.0288957,1:0.0288957):0.0531425):0.0486673):0.062317):0.60861,((((47:0.0363305,(((62:0.00660739,58:0.00660739):0.011345,(70:0.00496959,54:0.00496959):0.0129828):0.0065665,((68:0.00291155,53:0.00291155):0.0178013,(66:0.0163583,((65:0.0045002,(69:0.00305355,59:0.00305355):0.00144664):0.000757378,(61:0.00311373,52:0.00311373):0.00214385):0.0111007):0.00435459):0.003806):0.0118116):0.111837,(76:0.0395418,(40:0.00641035,34:0.00641035):0.0331314):0.108625):0.0327298,((((44:0.00708562,36:0.00708562):0.0773928,(37:0.025,27:0.025):0.0594785):0.00501024,18:0.0894887):0.0248315,(15:0.0649576,6:0.0649576):0.0493626):0.0665766):0.0680223,((((80:0.0173948,73:0.0173948):0.0162433,(67:0.0129751,((63:0.00435012,57:0.00435012):0.00727273,(60:0.00848091,(64:0.00386096,((56:0.00203231,55:0.00203231):0.00103,51:0.0030623):0.000798654):0.00461996):0.00314194):0.00135223):0.0206631):0.0296773,(33:0.0415374,((75:0.0372575,(45:0.0371022,38:0.0371022):0.000155282):0.0029007,((43:0.0101608,32:0.0101608):0.0242563,31:0.0344171):0.00574108):0.00137926):0.021778):0.147776,((((74:0.0336172,((79:0.0258073,(77:0.0203659,(78:0.00390563,72:0.00390563):0.0164602):0.00544144):0.00767555,49:0.0334829):0.000134364):0.0132633,(35:0.0137148,24:0.0137148):0.0331656):0.0721567,(10:0.0147938,8:0.0147938):0.104243):0.0343567,((((46:0.00103749,42:0.00103749):0.0373456,(48:0.0259862,41:0.0259862):0.0123969):0.00173179,39:0.0401149):0.0339623,((71:0.0427659,50:0.0427659):0.0221428,(9:0.0467372,2:0.0467372):0.0181715):0.00916857):0.0793167):0.0576977):0.0378275):0.552713);
So after the first line every line starts with a number in brackets. I would need to grep the number in brackets and output it into a new file (without [) ..how would that be done>
grep -Po '(?<=\[)\d+(?=\])' file > new_file
-P for Perl regexs so it is possible to use:
\d for a digit
positive lookbehind and positive lookahead ((?<=\[) and (?=\]))
-o for only matching
Another possibility if your grep doesn't support the -P option but awk is available could be this:
awk -F '[][]' '{ if ($2 != "") print $2 }' file > new_file
-F tells awk to accept both ] and [ as a field delimiter, $2 then contains the number you want and is printed.
In three steps using simple commands:
grep -v "//" inputfile | cut -d"[" -f2 | cut -d"]" -f1
In sed can you remove everything outside the []:
grep -v "//" inputfile | sed 's/.*\[\(.*\)].*/\1/'