I have this code in which i have set one mapper and one reducer.I want to include one more mapper and a reducer for doing further jobs.
The problem is that i have to take the output file of the first map reduce job as the input to the next map reduce job.Is it possible to do that?if yes then how can i do it?
public int run(String[] args) throws Exception
{
JobConf conf = new JobConf(getConf(),DecisionTreec45.class);
conf.setJobName("c4.5");
// the keys are words (strings)
conf.setOutputKeyClass(Text.class);
// the values are counts (ints)
conf.setOutputValueClass(IntWritable.class);
conf.setMapperClass(MyMapper.class);
conf.setReducerClass(MyReducer.class);
//set your input file path below
FileInputFormat.setInputPaths(conf, "/home/hduser/Id3_hds/playtennis.txt");
FileOutputFormat.setOutputPath(conf, new Path("/home/hduser/Id3_hds/1/output"+current_index));
JobClient.runJob(conf);
return 0;
}
yes its possible to do that. you can check the following tutorial to see how chaining occurs. http://gandhigeet.blogspot.com/2012/12/as-discussed-in-previous-post-hadoop.html
Make sure you delete the intermediate output data in HDFS which will be created by each MR phase by using fs.delete(intermediateoutputPath);
Look at how this works.
You need to have two jobs. Job2 is dependent on job1.
public class ChainJobs extends Configured implements Tool {
private static final String OUTPUT_PATH = "intermediate_output";
#Override
public int run(String[] args) throws Exception {
/*
* Job 1
*/
Configuration conf = getConf();
FileSystem fs = FileSystem.get(conf);
Job job = new Job(conf, "Job1");
job.setJarByClass(ChainJobs.class);
job.setMapperClass(MyMapper1.class);
job.setReducerClass(MyReducer1.class);
job.setOutputKeyClass(Text.class);
job.setOutputValueClass(IntWritable.class);
job.setInputFormatClass(TextInputFormat.class);
job.setOutputFormatClass(TextOutputFormat.class);
TextInputFormat.addInputPath(job, new Path(args[0]));
TextOutputFormat.setOutputPath(job, new Path(OUTPUT_PATH));
job.waitForCompletion(true); /*this goes to next command after this job is completed. your second job is dependent on your first job.*/
/*
* Job 2
*/
Configuration conf2 = getConf();
Job job2 = new Job(conf2, "Job 2");
job2.setJarByClass(ChainJobs.class);
job2.setMapperClass(MyMapper2.class);
job2.setReducerClass(MyReducer2.class);
job2.setOutputKeyClass(Text.class);
job2.setOutputValueClass(Text.class);
job2.setInputFormatClass(TextInputFormat.class);
job2.setOutputFormatClass(TextOutputFormat.class);
TextInputFormat.addInputPath(job2, new Path(OUTPUT_PATH));
TextOutputFormat.setOutputPath(job2, new Path(args[1]));
return job2.waitForCompletion(true) ? 0 : 1;
}
/**
* Method Name: main Return type: none Purpose:Read the arguments from
* command line and run the Job till completion
*
*/
public static void main(String[] args) throws Exception {
// TODO Auto-generated method stub
if (args.length != 2) {
System.err.println("Enter valid number of arguments <Inputdirectory> <Outputlocation>");
System.exit(0);
}
ToolRunner.run(new Configuration(), new ChainJobs(), args);
}
}
Related
From the below code I didn't understand 2 things:
DistributedCache.addcachefile(new URI ('/abc.dat'), job.getconfiguration())
I didn't understand URI path has to be present in the HDFS. Correct me if I am wrong.
And what is p.getname().equals() from the below code:
public class MyDC {
public static class MyMapper extends Mapper < LongWritable, Text, Text, Text > {
private Map < String, String > abMap = new HashMap < String, String > ();
private Text outputKey = new Text();
private Text outputValue = new Text();
protected void setup(Context context) throws
java.io.IOException, InterruptedException {
Path[] files = DistributedCache.getLocalCacheFiles(context.getConfiguration());
for (Path p: files) {
if (p.getName().equals("abc.dat")) {
BufferedReader reader = new BufferedReader(new FileReader(p.toString()));
String line = reader.readLine();
while (line != null) {
String[] tokens = line.split("\t");
String ab = tokens[0];
String state = tokens[1];
abMap.put(ab, state);
line = reader.readLine();
}
}
}
if (abMap.isEmpty()) {
throw new IOException("Unable to load Abbrevation data.");
}
}
protected void map(LongWritable key, Text value, Context context)
throws java.io.IOException, InterruptedException {
String row = value.toString();
String[] tokens = row.split("\t");
String inab = tokens[0];
String state = abMap.get(inab);
outputKey.set(state);
outputValue.set(row);
context.write(outputKey, outputValue);
}
}
public static void main(String[] args)
throws IOException, ClassNotFoundException, InterruptedException {
Job job = new Job();
job.setJarByClass(MyDC.class);
job.setJobName("DCTest");
job.setNumReduceTasks(0);
try {
DistributedCache.addCacheFile(new URI("/abc.dat"), job.getConfiguration());
} catch (Exception e) {
System.out.println(e);
}
job.setMapperClass(MyMapper.class);
job.setMapOutputKeyClass(Text.class);
job.setMapOutputValueClass(Text.class);
FileInputFormat.addInputPath(job, new Path(args[0]));
FileOutputFormat.setOutputPath(job, new Path(args[1]));
job.waitForCompletion(true);
}
}
The idea of Distributed Cache is to make some static data available to the task node before it starts its execution.
File has to be present in HDFS ,so that it can then add it to the Distributed Cache (to each task node)
DistributedCache.getLocalCacheFile basically gets all the cache files present in that task node. By if (p.getName().equals("abc.dat")) { you are getting the appropriate Cache File to be processed by your application.
Please refer to the docs below:
https://hadoop.apache.org/docs/r1.2.1/mapred_tutorial.html#DistributedCache
https://hadoop.apache.org/docs/r1.2.1/api/org/apache/hadoop/filecache/DistributedCache.html#getLocalCacheFiles(org.apache.hadoop.conf.Configuration)
DistributedCache is an API which is used to add a file or a group of files in the memory and will be available for every data-nodes whether the map-reduce will work. One example of using DistributedCache is map-side joins.
DistributedCache.addcachefile(new URI ('/abc.dat'), job.getconfiguration()) will add the abc.dat file in the cache area. There can be n numbers of file in the cache and p.getName().equals("abc.dat")) will check the file which you required. Every path in HDFS will be taken under Path[] for map-reduce processing. For example :
FileInputFormat.addInputPath(job, new Path(args[0]));
FileOutputFormat.setOutputPath(job, new Path(args[1]));
The first Path(args[0]) is the first argument
(input file location) you pass while Jar execution and Path(args[1]) is the second argument which the output file location. Everything is taken as Path array.
In the same way when you add any file to cache it will get arrayed in the Path array which you shud be retrieving using the below code.
Path[] files = DistributedCache.getLocalCacheFiles(context.getConfiguration());
It will return all the files present in the cache and you will your file name by p.getName().equals() method.
I have 1 MR job and its output looks like :
128.187.140.171,11
129.109.6.54,27
129.188.154.200,44
129.193.116.41,5
129.217.186.112,17
In the mapper code of 2nd MR job, I am doing this ;
public void map(LongWritable key, Text value, Context context)
throws IOException, InterruptedException {
// Parse the input string into a nice map
// System.out.println(value.toString());
if (value.toString().contains(",")) {
System.out.println("Inside");
String[] arr = value.toString().split(",");
if (arr.length > 1) {
System.out.println(arr[1]);
context.write(new Text(arr[1]), new Text(arr[0]));
}
}
The output of print statements are correct :
Inside
11
Inside
27
But the context.write keeps showing following output :
1,slip4068.sirius.com
1,hstar.gsfc.nasa.gov
1,ad11-010.compuserve.com
1,slip85-2.co.us.ibm.net
1,stimpy.actrix.gen.nz
1,j14.ktk1.jaring.my
1,ad08-009.compuserve.com
Why I keep getting 1 in the Keys ?
This is my driver code:
public int run(String[] args) throws Exception {
// TODO Auto-generated method stub
Configuration conf = getConf();
conf.set("mapreduce.output.textoutputformat.separator", ",");
Job job = new Job(conf, "WL Demo");
job.setJarByClass(WLDemo.class);
job.setMapperClass(WLMapper1.class);
job.setReducerClass(WLReducer1.class);
job.setInputFormatClass(TextInputFormat.class);
job.setOutputKeyClass(Text.class);
job.setOutputValueClass(IntWritable.class);
Path in = new Path(args[0]);
Path out = new Path(args[1]);
Path out2 = new Path(args[2]);
FileInputFormat.setInputPaths(job, in);
FileOutputFormat.setOutputPath(job, out);
boolean succ = job.waitForCompletion(true);
if (!succ) {
System.out.println("Job1 failed, exiting");
return -1;
}
Job job2 = new Job(conf, "top-k-pass-2");
FileInputFormat.setInputPaths(job2, out);
FileOutputFormat.setOutputPath(job2, out2);
job2.setJarByClass(WLDemo.class);
job2.setMapperClass(WLMapper2.class);
// job2.setReducerClass(Reducer1.class);
job2.setInputFormatClass(TextInputFormat.class);
job2.setMapOutputKeyClass(Text.class);
job2.setMapOutputValueClass(Text.class);
job2.setNumReduceTasks(1);
succ = job2.waitForCompletion(true);
if (!succ) {
System.out.println("Job2 failed, exiting");
return -1;
}
return 0;
}
How can I get correct values in output key of my 2nd MR job ?
Change job2.setNumReduceTasks(1) to job2.setNumReduceTasks(0) .Because of that it is running a identity reducer that is bringing the output key as 1, you should have 1 as a key for some records from map1 output.
i am trying to set the configuration property from the console using -D generic options.
here is my console input:
$ hadoop jar hadoop-0.20.2/gtee.jar dd.MaxTemperature -D file.pattern=2007.* /inputdata /outputdata
but i did cross verification from the code by
Configuration conf;
System.out.println(conf.get("file.pattern"));
results null output.what would be the problem here, why value of the property "file.pattern" not displaying ? Can any one please help me.
Thanks
EDITED SECTION:
Driver Code:
public int run(String[] args) throws Exception {
Job job = new Job();
job.setJarByClass(MaxTemperature.class);
job.setJobName("MaxTemperature");
Configuration conf = new Configuration();
FileSystem fs = FileSystem.get(URI.create(args[0]), conf);
// System.out.println(conf.get("file.pattern"));
if (fs.exists(new Path(args[1]))) {
fs.delete(new Path(args[1]), true);
}
System.out.println(conf.get("file.pattern"));
job.setOutputKeyClass(Text.class);
job.setOutputValueClass(IntWritable.class);
FileInputFormat.addInputPath(job, new Path(args[0]));
FileInputFormat.setInputPathFilter(job, RegexExcludePathFilter.class);
FileOutputFormat.setOutputPath(job, new Path(args[1]));
job.setOutputFormatClass(TextOutputFormat.class);
job.setMapperClass(MapMapper.class);
job.setCombinerClass(Mapreducers.class);
job.setReducerClass(Mapreducers.class);
return job.waitForCompletion(true) ? 0 : 1;
}
public static void main(String[] args) throws Exception {
int xx = ToolRunner.run(new Configuration(),new MaxTemperature(), args);
System.exit(xx);
}
path filter implementation:
public static class RegexExcludePathFilter extends Configured implements
PathFilter {
//String pattern = "2007.[0-1]?[0-2].[0-9][0-9].txt" ;
Configuration conf;
Pattern pattern;
#Override
public boolean accept(Path path) {
Matcher m = pattern.matcher(path.toString());
return m.matches();
}
#Override
public void setConf(Configuration conf) {
this.conf = conf;
pattern = Pattern.compile(conf.get("file.pattern"));
System.out.println(pattern);
}
}
To confirm you -D option is supported in the version 20.2 however that requires you to implement the Tool interface to read variables from command line
Configuration conf = new Configuration(); //this is the issue
// When implementing tool use this
Configuration conf = this.getConf();
You are passing it with a space in between, that's not how you should do it. Instead try:
-Dfile.pattern=2007.*
I have observed that there are multiple ways to write driver method of Hadoop program.
Following method is given in Hadoop Tutorial by Yahoo
public void run(String inputPath, String outputPath) throws Exception {
JobConf conf = new JobConf(WordCount.class);
conf.setJobName("wordcount");
// the keys are words (strings)
conf.setOutputKeyClass(Text.class);
// the values are counts (ints)
conf.setOutputValueClass(IntWritable.class);
conf.setMapperClass(MapClass.class);
conf.setReducerClass(Reduce.class);
FileInputFormat.addInputPath(conf, new Path(inputPath));
FileOutputFormat.setOutputPath(conf, new Path(outputPath));
JobClient.runJob(conf);
}
and this method is given in Hadoop The Definitive Guide 2012 book by Oreilly.
public static void main(String[] args) throws Exception {
if (args.length != 2) {
System.err.println("Usage: MaxTemperature <input path> <output path>");
System.exit(-1);
}
Job job = new Job();
job.setJarByClass(MaxTemperature.class);
job.setJobName("Max temperature");
FileInputFormat.addInputPath(job, new Path(args[0]));
FileOutputFormat.setOutputPath(job, new Path(args[1]));
job.setMapperClass(MaxTemperatureMapper.class);
job.setReducerClass(MaxTemperatureReducer.class);
job.setOutputKeyClass(Text.class);
job.setOutputValueClass(IntWritable.class);
System.exit(job.waitForCompletion(true) ? 0 : 1);
}
While trying program given in Oreilly book I found that constructors of Job class are deprecated. As Oreilly book is based on Hadoop 2 (yarn) I was surprised to see that they have used deprecated class.
I would like to know which method everyone uses?
I use the former approach.If we go with overriding the run() method, we can use hadoop jar options like -D,-libjars,-files etc.,.All these are very much necessary in almost any hadoop project.
Not sure if we can use them through the main() method.
Slightly different to your first (Yahoo) block - you should be using the ToolRunner / Tool classes which take advantage of the GenericOptionsParser (as noted in Eswara's answer)
A template pattern would be something like:
import org.apache.hadoop.conf.Configured;
import org.apache.hadoop.mapred.JobConf;
import org.apache.hadoop.mapreduce.Job;
import org.apache.hadoop.util.Tool;
import org.apache.hadoop.util.ToolRunner;
public class ToolExample extends Configured implements Tool {
#Override
public int run(String[] args) throws Exception {
// old API
JobConf jobConf = new JobConf(getConf());
// new API
Job job = new Job(getConf());
// rest of your config here
// determine success / failure (depending on your choice of old / new api)
// return 0 for success, non-zero for an error
return 0;
}
public static void main(String args[]) throws Exception {
System.exit(ToolRunner.run(new ToolExample(), args));
}
}
I want to merge two files into one.
I made two mappers to read, and one reducer to join.
JobConf classifiedConf = new JobConf(new Configuration());
classifiedConf.setJarByClass(myjob.class);
classifiedConf.setJobName("classifiedjob");
FileInputFormat.setInputPaths(classifiedConf,classifiedInputPath );
classifiedConf.setMapperClass(ClassifiedMapper.class);
classifiedConf.setMapOutputKeyClass(TextPair.class);
classifiedConf.setMapOutputValueClass(Text.class);
Job classifiedJob = new Job(classifiedConf);
//first mapper config
JobConf featureConf = new JobConf(new Configuration());
featureConf.setJobName("featureJob");
featureConf.setJarByClass(myjob.class);
FileInputFormat.setInputPaths(featureConf, featuresInputPath);
featureConf.setMapperClass(FeatureMapper.class);
featureConf.setMapOutputKeyClass(TextPair.class);
featureConf.setMapOutputValueClass(Text.class);
Job featureJob = new Job(featureConf);
//second mapper config
JobConf joinConf = new JobConf(new Configuration());
joinConf.setJobName("joinJob");
joinConf.setJarByClass(myjob.class);
joinConf.setReducerClass(JoinReducer.class);
joinConf.setOutputKeyClass(Text.class);
joinConf.setOutputValueClass(Text.class);
Job joinJob = new Job(joinConf);
//reducer config
//JobControl config
joinJob.addDependingJob(featureJob);
joinJob.addDependingJob(classifiedJob);
secondJob.addDependingJob(joinJob);
JobControl jobControl = new JobControl("jobControl");
jobControl.addJob(classifiedJob);
jobControl.addJob(featureJob);
jobControl.addJob(secondJob);
Thread thread = new Thread(jobControl);
thread.start();
while(jobControl.allFinished()){
jobControl.stop();
}
But, I get this message:
WARN mapred.JobClient:
Use GenericOptionsParser for parsing the arguments. Applications should implement Tool for the same.
WARN mapred.JobClient: No job jar file set. User classes may not be found. See JobConf(Class) or JobConf#setJar(String).
anyone help please..................
Which version of Hadoop are you using?
The warning you get will stop the program?
You don't need to use setJarByClass(). You can see my snippet, I can run it without using setJarByClass() method.
JobConf job = new JobConf(PageRankJob.class);
job.setJobName("PageRankJob");
job.setOutputKeyClass(Text.class);
job.setOutputValueClass(Text.class);
job.setMapperClass(PageRankMapper.class);
job.setReducerClass(PageRankReducer.class);
job.setInputFormat(TextInputFormat.class);
job.setOutputFormat(TextOutputFormat.class);
FileInputFormat.setInputPaths(job, new Path(args[0]));
FileOutputFormat.setOutputPath(job, new Path(args[1]));
JobClient.runJob(job);
You should implement your Job this way:
public class MyApp extends Configured implements Tool {
public int run(String[] args) throws Exception {
// Configuration processed by ToolRunner
Configuration conf = getConf();
// Create a JobConf using the processed conf
JobConf job = new JobConf(conf, MyApp.class);
// Process custom command-line options
Path in = new Path(args[1]);
Path out = new Path(args[2]);
// Specify various job-specific parameters
job.setJobName("my-app");
job.setInputPath(in);
job.setOutputPath(out);
job.setMapperClass(MyMapper.class);
job.setReducerClass(MyReducer.class);
// Submit the job, then poll for progress until the job is complete
JobClient.runJob(job);
return 0;
}
public static void main(String[] args) throws Exception {
// Let ToolRunner handle generic command-line options
int res = ToolRunner.run(new Configuration(), new MyApp(), args);
System.exit(res);
}
}
This comes straight out of Hadoop's documentation here.
So basically your job needs to inherit from Configured and implement Tool. This will force you to implement run(). Then start your job from your main class using Toolrunner.run(<your job>, <args>) and the warning will disappear.
You need to have this code in the driver job.setJarByClass(MapperClassName.class);