Is there a way to search fhir resources on a text search parameter using wildcards? - hl7-fhir

I'm trying to search for all Observations where "blood" is associated with the code using:
GET [base]/Observation?code:text=blood
It appears that the search is matching Observations where the associated text starts with "blood" but not matching on associated text that contains "blood".
Using the following, I get results with a Coding.display of "Systolic blood pressure" but I'd like to also get these Observations by searching using the text "blood".
GET [base]/Observation?code:text=sys
Is there a different modifier I should be using or wildcards I should use?

The servers seem to do as the spec requests: when using the modifier :text on a token search parameter (like code here), the spec says:
":text The search parameter is processed as a string that searches
text associated with the code/value"
If we look at how a server is supposed to search a string, we find:
"By default, a field matches a string query if the value of the field
equals or starts with the supplied parameter value, after both have
been normalized by case and accent."
Now, if code would have been a true string search parameter, we could have applied the modifier contains, however we cannot stack modifiers, so in this case code:text:containts would may logical, but is not part of the current specification.
So, I am afraid that there is currently no "standard" way to do what you want.

Related

Maching two words as a single word

Consider that I have a document which has a field with the following content: 5W30 QUARTZ INEO MC 3 5L
A user wants to be able to search for MC3 (no space) and get the document; however, search for MC 3 (with spaces) should also work. Moreover, there can be documents that have the content without spaces and that should be found when querying with a space.
I tried indexing without spaces (e.g. 5W30QUARTZINEOMC35L), but that does not really work as using a wildcard search I would match too much, e.g. MC35 would also match, and I only want to match two exact words concatenated together (as well as exact single word).
So far I'm thinking of additionally indexing all combinations of two words, e.g. 5W30QUARTZ, QUARTZINEO, INEOMC, MC3, 35L. However, does Elasticsearch have a native solution for this?
I'm pretty sure what you want can be done with the shingle token filter. Depending on your mapping, I would imagine you'd need to add a filter looking something like this to your content field to get your tokens indexed in pairs:
"filter_shingle":{
"type":"shingle",
"max_shingle_size":2,
"min_shingle_size":2,
"output_unigrams":"true"
}
Note that this is also already the default configuration, I just added it for clarity.

Searching for special characters in elastic

I have a field name in my index with value $$$ LTD
Standard analyser is applied to this field.
I'm trying to search for record with this value as below but nothing found.
http://localhost:9200/my-index/_search?q=name:$$$
In the same time when I'm searching for name:"$$$ LTD" it returns all records that contains LTD as if $$$ ignored.
I'm quite sure proper value exists in index. So how can I search for it?
UPD.
Mapping related to searchable field:
{“name":{"type":"string","boost":4.0,"analyzer”:”nameAnalyzer"}
{"nameAnalyzer":{"filter":["lowercase"],"type":"custom","tokenizer":"standard"}}}
Not use Special charactor ($) in your URL parameters.So use encode of it,for Ex. encode of $ is %24 so use this way.
http://localhost:9200/my-index/_search?q=name:%24%24%24
Solved.
Standard tokeniser strips special characters.
I have to define different type of tokeniser (probably space based).
More information on this question can be found on page:
https://discuss.elastic.co/t/how-to-index-special-characters-and-search-those-special-characters-in-elasticsearch/42506/2

ElasticSearch Nest AutoComplete based on words split by whitespace

I have AutoComplete working with ElasticSearch (Nest) and it's fine when the user types in the letters from the begining of the phrase but I would like to be able to use a specialized type of auto complete if it's possible that caters for words in a sentence.
To clarify further, my requirement is to be able to "auto complete" like such:
Imagine the full indexed string is "this is some title". When the user types in "th", this comes back as a suggestion with my current code.
I would also like the same thing to be returned if the user types in "som" or "title" or any letters that form a word (word being classified as a string between two spaces or the start/end of the string).
The code I have is:
var result = _client.Search<ContentIndexable>(
body => body
.Index(indexName)
.SuggestCompletion("content-suggest" + Guid.NewGuid(),
descriptor =>
descriptor
.OnField(t => t.Title.Suffix("completion"))
.Text(searchTerm)
.Size(size)));
And I would like to see if it would be possible to write something that matches my requirement using SuggestCompletion (and not by doing a match query).
Many thanks,
Update:
This question already has an answer here but I leave it here since the title/description is probably a little easier to search by search engines.
The correct solution to this problem can be found here:
Elasticsearch NEST client creating multi-field fields with completion
#Kha i think it's better to use the NGram Tokenizer
So you should use this tokenizer when you create the mapping.
If you want more info, and maybe an example write back.

Amazon Cloudsearch not searching with partial string

I'm testing Amazon Cloudsearch for my web application and i'm running into some strange issues.
I have the following domain indexes: name, email, id.
For example, I have data such as: John Doe, John#example.com, 1
When I search for jo I get nothing. If I search for joh I still get nothing, But if I search for john then I get the above document as a hit. Why is it not getting when I put partial strings? I even put suggestors on name and email with fuzzy matching enabled. Is there something else i'm missing? I read the below on this:
http://docs.aws.amazon.com/cloudsearch/latest/developerguide/searching-text.html
http://docs.aws.amazon.com/cloudsearch/latest/developerguide/searching.html
http://docs.aws.amazon.com/cloudsearch/latest/developerguide/searching-compound-queries.html
I'm doing the searches using boto as well as with the form on AWS page.
What you're trying to do -- finding "john" by searching "jo" -- is a called a prefix search.
You can accomplish this either by searching
(prefix field=name 'jo')
or
q=jo*
Note that if you use the q=jo* method of appending * to all your queries, you may want to do something like q=jo* |jo because john* will not match john.
This can seem a little confusing but imagine if google gave back results for prefix matches: if you searched for tort and got back a mess of results about tortoises and torture instead of tort (a legal term), you would be very confused (and frustrated).
A suggester is also a viable approach but that's going to give you back suggestions (like john, jordan and jostle rather than results) that you would then need to search for; it does not return matching documents to you.
See "Searching for Prefixes in Amazon CloudSearch" at http://docs.aws.amazon.com/cloudsearch/latest/developerguide/searching-text.html
Are your index field types "Text"? If they are just "Literals", they have to be an exact match.
I think you must have your name and email fields set as the literal type instead of the text type, otherwise a simple text search of 'jo' or 'Joh' should've found the example document.
While using a prefix search may have solved your problem (and that makes sense if the fields are set as the literal type), the accepted answer isn't really correct. The notion that it's "like a google search" isn't based on anything in the documentation. It actually contradicts the example they use, and in general muddies up what's possible with the service. From the docs:
When you search text and text-array fields for individual terms, Amazon CloudSearch finds all documents that contain the search terms anywhere within the specified field, in any order. For example, in the sample movie data, the title field is configured as a text field. If you search the title field for star, you will find all of the movies that contain star anywhere in the title field, such as star, star wars, and a star is born. This differs from searching literal fields, where the field value must be identical to the search string to be considered a match.

How to use regular expression in fetching data from graphite?

I want to fetch data from different counters from graphite in one single request like:-
summarize(site.testing_server_2.triggers_unknown.count,'1hour','sum')&format=json
summarize(site.testing_server_2.requests_failed.count,'1hour','sum')&format=json
summarize(site.testing_server_2.core_network_bad_soap.count,'1hour','sum')&format=json
and so on.. 20 more.
But I don't want to fetch
summarize(site.testing_server_2.module_xyz_abc.count,'1hour','sum')&format=json
in that request how can i do that?
This is what I tried:
summarize(site.testing_server_2.*.count,'1hour','sum')&format=json&from=-24hour
It gets json data for 'module_xyz_abc' too, but that i don't want.
You can't use regular expressions per se, but you can use some similar (in concept and somewhat in format) matching techniques available within the Graphite Render URL API. There are a few ways you can "match" within a target's "bucket" (i.e. between the dots).
Target Matching
Asterisk * match
The asterisk can be used to match ANY -zero or more- character(s). It can be used to replace the entire bucket (site.*.test) or within the bucket (site.w*t.test). Here is an example:
site.testing_server_2.requests_*.count
This would match site.testing_server_2.requests_failed.count, site.testing_server_2.requests_success.count, site.testing_server_2.requests_blah123.count, and so forth.
Character range [a-z0-9] match
The character range match is used to match on a single character (site.w[0-9]t.test) in the target's bucket and is specified as a range or list. For example:
site.testing_server_[0-4].requests_failed.count
This would match on site.testing_server_0.requests_failed.count, site.testing_server_1.requests_failed.count, site.testing_server_2.requests_failed.count, and so forth.
Value list (group capture) {blah, test, ...} match
The value list match can be used to match anything in the list of values, in the specified portion of the target's bucket.
site.testing_server_2.{triggers_unknown,requests_failed,core_network_bad_soap}.count
This would match site.testing_server_2.triggers_unknown.count, site.testing_server_2.requests_failed.count, and site.testing_server_2.core_network_bad_soap.count. But nothing else, so site.testing_server_2.module_xyz_abc.count would not match.
Answer
Without knowing all of your bucket values it is difficult to be surgical with the approach (perhaps with a combination of the matching options), so I'll recommend just going with a value list match. This should allow you to get all of the values in one -somewhat long- request. For example (and keep in mind you'd need to include all of your values):
summarize(site.testing_server_2.{triggers_unknown,requests_failed,core_network_bad_soap}.count,'1hour','sum')&format=json&from=-24hour
For more, see Graphite Paths and Wildcards

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