Resource Manager Has No Nodes - hadoop

EDIT: I have looked at YARN Resourcemanager not connecting to nodemanager and the solution does not work for me. I have attached the section of the node-manager log where a connection to the resource manager is made:
[main] client.RMProxy (RMProxy.java:createRMProxy(98)) - Connecting to ResourceManager at /0.0.0.0:8031
2016-06-17 19:01:04,697 INFO [main] nodemanager.NodeStatusUpdaterImpl (NodeStatusUpdaterImpl.java:getNMContainerStatuses(429)) - Sending out 0 NM container statuses: []
2016-06-17 19:01:04,701 INFO [main] nodemanager.NodeStatusUpdaterImpl (NodeStatusUpdaterImpl.java:registerWithRM(268)) - Registering with RM using containers :[]
2016-06-17 19:01:05,815 INFO [main] ipc.Client (Client.java:handleConnectionFailure(867)) - Retrying connect to server: 0.0.0.0/0.0.0.0:8031. Already tried 0 time(s); retry policy is RetryUpToMaximumCountWithFixedSleep(maxRetries=10, sleepTime=1000 MILLISECONDS)
2016-06-17 19:01:06,816 INFO [main] ipc.Client (Client.java:handleConnectionFailure(867)) - Retrying connect to server: 0.0.0.0/0.0.0.0:8031. Already tried 1 time(s); retry policy is RetryUpToMaximumCountWithFixedSleep(maxRetries=10, sleepTime=1000 MILLISECONDS)
For some reason it says it is connecting to 0.0.0.0. When I ssh into one of the data nodes and ping resource-manager I get a response so it is able to resolve the hostname.
This leads me to believe that an options is incorrect in my yarn-site.xml as my nodes are trying to connect to 0.0.0.0:8031 instead of the resource-manager:8031
I am running a Cloudera hadoop cluster on dockers and am having issues with the Yarn resource manager being able to see the other nodes. They way it is set up is as follows:
Node1 - Namenode (hadoop-hdfs-namenode)
Node 2 - Secondary Namenode (hadoop-hdfs-secondarynamenode)
Node 3 - Yarn Resource-Manager (hadoop-yarn-resourcemanager)
Node 4 - datanode and node manager (hadoop-hdfs-datanode, hadoop-yarn-nodemanager)
Node 5 - datanode and node manager (hadoop-hdfs-datanode, hadoop-yarn-nodemanager)
When I go to namenode:50070 I am able to see both nodes. However, when I go to the resource-manager:8088 it shows I have zero nodes. My yarn-site.xml file which is on every node is as follows:
<configuration>
<property>
<name>yarn.resourcemanager.address</name>
<value>resource-manager:8032</value>
</property>
<property>
<name>yarn.resourcemanager.scheduler.address</name>
<value>resource-manager:8030</value>
</property>
<property>
<description>Classpath for typical applications.</description>
<name>yarn.application.classpath</name>
<value>
$HADOOP_CONF_DIR,
$HADOOP_COMMON_HOME/*,$HADOOP_COMMON_HOME/lib/*,
$HADOOP_HDFS_HOME/*,$HADOOP_HDFS_HOME/lib/*,
$HADOOP_MAPRED_HOME/*,$HADOOP_MAPRED_HOME/lib/*,
$HADOOP_YARN_HOME/*,$HADOOP_YARN_HOME/lib/*
</value>
</property>
<property>
<name>yarn.nodemanager.aux-services</name>
<value>mapreduce_shuffle</value>
</property>
<property>
<name>yarn.nodemanager.local-dirs</name>
<value>file:///data/1/yarn/local,file:///data/2/yarn/local,file:///data/3/yarn/local</value>
</property>
<property>
<name>yarn.nodemanager.log-dirs</name>
<value>file:///data/1/yarn/logs,file:///data/2/yarn/logs,file:///data/3/yarn/logs</value>
</property>
<property>
<name>yarn.log.aggregation-enable</name>
<value>true</value>
</property>
<property>
<description>Where to aggregate logs</description>
<name>yarn.nodemanager.remote-app-log-dir</name>
<value>hdfs://namenode:8020/var/log/hadoop-yarn/apps</value>
</property>
<property>
<name>yarn.resourcemanager.webapp.address</name>
<value>resource-manager:8088</value>
</property>
<property>
<name>yarn.resourcemanager.resource-tracker.address</name>
<value>resource-manager:8031</value>
</property>
<property>
<name>yarn.resourcemanager.admin.address</name>
<value>resource-manager:8033</value>
</property>
<property>
<description>
Number of seconds after an application finishes before the nodemanager's
DeletionService will delete the application's localized file directory
and log directory.
To diagnose Yarn application problems, set this property's value large
enough (for example, to 600 = 10 minutes) to permit examination of these
directories. After changing the property's value, you must restart the
nodemanager in order for it to have an effect.
The roots of Yarn applications' work directories is configurable with
the yarn.nodemanager.local-dirs property (see below), and the roots
of the Yarn applications' log directories is configurable with the
yarn.nodemanager.log-dirs property (see also below).
</description>
<name>yarn.nodemanager.delete.debug-delay-sec</name>
<value>600</value>
</property>
</configuration>
Does anyone have any ideas as to why this is the case?
Thanks for reading.

Specify:
<property>
<name>yarn.resourcemanager.hostname</name>
<value>master-1</value>
</property>

As indicated in the edit it appeared as if the yarn-site.xml was not being picked up and only defaults were happening. I solved this be copying the yarn-site.xml file into every directory on the machine as user root. I then ran the node-manager as to make it error reading the file as it does not run under user root. The log directed me to where it expected the file which was in a yarn specific directory instead of the general hadoop directory.

Related

Why does a datanode doesn´t disappear in the hadoop web site when the datanode job is killed?

I have a 3 node HA cluster in a CentOS 8 VM. I am using ZK 3.7.0 and Hadoop 3.3.1.
In my cluster I have 2 namenodes, node1 is the active namenode and node2 is the standby namenode in case that node1 falls. The other node is the datanode
I just start all with the command
start-dfs.sh
In node1 I had the following processes running: NameNode, Jps, QuorumPeerMain and JournalNode
In node2 I had the following processes running: NameNode, Jps, QuorumPeerMain, JournalNode and DataNode.
My hdfs-site.xml configuration is the following:
<property>
<name>dfs.replication</name>
<value>2</value>
</property>
<property>
<name>dfs.namenode.name.dir</name>
<value>/datos/namenode</value>
</property>
<property>
<name>dfs.datanode.data.dir</name>
<value>/datos/datanode</value>
</property>
<property>
<name>dfs.nameservices</name>
<value>ha-cluster</value>
</property>
<property>
<name>dfs.ha.namenodes.ha-cluster</name>
<value>nodo1,nodo2</value>
</property>
<property>
<name>dfs.permissions</name>
<value>false</value>
</property>
<property>
<name>dfs.namenode.rpc-address.ha-cluster.nodo1</name>
<value>nodo1:8020</value>
</property>
<property>
<name>dfs.namenode.rpc-address.ha-cluster.nodo2</name>
<value>nodo2:8020</value>
</property>
<property>
<name>dfs.namenode.http-address.ha-cluster.nodo1</name>
<value>nodo1:9870</value>
</property>
<property>
<name>dfs.namenode.http-address.ha-cluster.nodo2</name>
<value>nodo2:9870</value>
</property>
<property>
<name>dfs.namenode.shared.edits.dir</name>
<value>qjournal://nodo3:8485;nodo2:8485;nodo1:8485/ha-cluster</value>
</property>
The problem is that since the node2 is the standby namenode I didn't want it to have the DataNode process running, so I killed it. I used the command kill -9 (I know it's not the best way, I should have used hdfs --daemon stop datanode).
Then I entered the hadoop website to check how many datanodes I had. In the node1 (the active namenode) Hadoop website, in the datanode part I only had 1 datanode, node3.
The problem is that in the Hadoop website of the node2 (the standby namenode) was like this:
In case u can't see the image:
default-rack/nodo2:9866 (192.168.0.102:9866) http://nodo2:9864 558s
/default-rack/nodo3:9866 (192.168.0.103:9866) http://nodo3:9864 1s
The node2 datanode hasn't been alive for 558s and it doesn't take the node as dead.
Does anybody know why does this happen??
in your hdfs-site.xml
check values for:
dfs.heartbeat.interval (Determines datanode heartbeat interval in
seconds.)
dfs.namenode.heartbeat.recheck-interval (This time decides the
interval to check for expired datanodes. With this value and
dfs.heartbeat.interval, the interval of deciding the datanode is
stale or not is also calculated. The unit of this configuration is
millisecond.)
check here for defaults and more info:
https://hadoop.apache.org/docs/r2.7.0/hadoop-project-dist/hadoop-hdfs/hdfs-default.xml
There is a formula to determine when a node is dead:
2 * dfs.namenode.heartbeat.recheck-interval + 10 * (1000 * dfs.heartbeat.interval)
means:
2 * 300000 + 10 * 3000 = 630000 milliseconds = 10 minutes 30 seconds or **630 seconds**.
source:
Hadoop 2.x Administration Cookbook (Packt) - Configuring Datanode heartbeat:
Datanode Removal time = (2 x dfs.namenode.heartbeat.recheck-interval ) + (10 X dfs.heartbeat.interval)

Fatal error of "failed to become active master" while running hbase in cluster mode

I have 4 nodes, one master and 3 slaves.
master: * .* .*.18, slaves: * .*. *.12, 104, 36.
Configurations for Hadoop on Namenode:
core-site.xml:
<configuration>
<property>
<name>fs.defaultFS</name>
<value>hdfs://localhost:9000</value>
</property>
</configuration>
hdfs-site.xml:
<configuration>
<property>
<name>dfs.replication</name>
<value>3</value>
</property>
<property>
<name>dfs.namenode.name.dir</name>
<value>file:///home/hduser/hadoop_store/hdfs/namenode</value>
</property>
<property>
<name>dfs.datanode.data.dir</name>
<value>file:///home/hduser/hadoop_store/hdfs/datanode</value>
</property>
</configuration>
hadoop-env.sh:
export JAVA_HOME="/usr/lib/jvm/java-8-openjdk-amd64"
export HADOOP_CONF_DIR=${HADOOP_CONF_DIR:-"/etc/hadoop"}
export HADOOP_OPTS="$HADOOP_OPTS -Djava.net.preferIPv4Stack=true"
export HADOOP_PID_DIR=${HADOOP_PID_DIR} // default to /tmp
export HADOOP_SECURE_DN_PID_DIR=${HADOOP_PID_DIR}
export HADOOP_IDENT_STRING=$USER
mapred-site.xml:
<configuration>
<property>
<name>mapreduce.framework.name</name>
<value>yarn</value>
</property>
<property>
<name>mapred.job.tracker</name>
<value>localhost:54311</value>
</property>
</configuration>
slaves:
10.0.3.12
10.0.3.36
10.0.3.104
yarn-site.xml:
<configuration>
<!-- Site specific YARN configuration properties -->
<property>
<name>yarn.resourcemanager.address</name>
<value>localhost:8050</value>
</property>
<property>
<name>yarn.nodemanager.aux-services</name>
<value>mapreduce_shuffle</value>
</property>
<property>
<name>yarn.nodemanager.aux-services.mapreduce.shuffle.class</name>
<value>org.apache.hadoop.mapred.ShuffleHandler</value>
</property>
</configuration>
In the slave nodes the configurations for hadoop are:
yarn-site.xml:
<configuration>
<!-- Site specific YARN configuration properties -->
<property>
<name>yarn.resourcemanager.address</name>
<value>10.0.3.18:8050</value>
</property>
<property>
<name>yarn.nodemanager.address</name>
<value>localhost:8035</value>
</property>
<property>
<name>yarn.nodemanager.aux-services</name>
<value>mapreduce_shuffle</value>
</property>
<property>
<name>yarn.nodemanager.aux-services.mapreduce.shuffle.class</name>
<value>org.apache.hadoop.mapred.ShuffleHandler</value>
</property>
</configuration>
the rest of the files remain the same in all the slave nodes as in the master node. With respect to the Hbase configuration,
hbase-env.sh(in all):
export JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64
export HBASE_MASTER_OPTS="$HBASE_MASTER_OPTS -XX:PermSize=128m -XX:MaxPermSize=128m -XX:ReservedCodeCacheSize=256m"
export HBASE_REGIONSERVER_OPTS="$HBASE_REGIONSERVER_OPTS -XX:PermSize=128m -XX:MaxPermSize=128m -XX:ReservedCodeCacheSize=256m"
export HBASE_REGIONSERVERS=${HBASE_HOME}/conf/regionservers
export HBASE_MANAGES_ZK=true
hbase-site.xml(in all):
<configuration>
<property>
<name>hbase.rootdir</name>
<value>hdfs://localhost:9000/hbase</value>
</property>
<property>
<name>hbase.cluster.distributed</name>
<value>true</value>
</property>
<property>
<name>hbase.zookeeper.quorum</name>
<value>10.0.3.18,10.0.3.12,10.0.3.104,10.0.3.36</value>
</property>
<property>
<name>hbase.zookeeper.property.dataDir</name>
<value>/home/hduser/Downloads/hbase/zookeeper</value>
</property>
<property>
<name>hbase.zookeeper.property.clientPort</name>
<value>2181</value>
</property>
<property>
<name>dfs.replication</name>
<value>3</value>
</property>
<property>
<name>zookeeper.session.timeout</name>
<value>1200000</value>
</property>
<property>
<name>hbase.zookeeper.property.tickTime</name>
<value>6000</value>
</property>
</configuration>
except that in slaves, localhost is changed to 10.0.3.18(address of namenode)
regionservers:
10.0.3.12
10.0.3.104
10.0.3.36
I formatted namenode and when I start hdfs with commands: start-dfs.sh and start-yarn.sh, output is as follows:
...succefully formatted namenode...
localhost: starting namenode, logging to /home/hduser/Downloads/hadoop/logs/hadoop-hduser-namenode-saichanda-OptiPlex-9020.out
10.0.3.12: starting datanode, logging to /home/hduser/Downloads/hadoop/logs/hadoop-hduser-datanode-aaron.out
10.0.3.36: starting datanode, logging to /home/hduser/Downloads/hadoop/logs/hadoop-hduser-datanode-dmacs-OptiPlex-9020.out
10.0.3.104: starting datanode, logging to /home/hduser/Downloads/hadoop/logs/hadoop-hduser-datanode-hadoop-104.out
Starting secondary namenodes [0.0.0.0]
0.0.0.0: starting secondarynamenode, logging to /home/hduser/Downloads/hadoop/logs/hadoop-hduser-secondarynamenode-saichanda-OptiPlex-9020.out
starting yarn daemons
starting resourcemanager, logging to /home/hduser/Downloads/hadoop/logs/yarn-hduser-resourcemanager-saichanda-OptiPlex-9020.out
10.0.3.12: starting nodemanager, logging to /home/hduser/Downloads/hadoop/logs/yarn-hduser-nodemanager-aaron.out
10.0.3.36: starting nodemanager, logging to /home/hduser/Downloads/hadoop/logs/yarn-hduser-nodemanager-dmacs-OptiPlex-9020.out
10.0.3.104: starting nodemanager, logging to /home/hduser/Downloads/hadoop/logs/yarn-hduser-nodemanager-hadoop-104.out
when I run jps command (on master):
28032 SecondaryNameNode
28481 Jps
28198 ResourceManager
27720 NameNode
when I run jps command (on slaves):
11303 DataNode
11595 Jps
11436 NodeManager
Then I started Hbase with the command: ./start-hbase.sh. output is:
10.0.3.12: running zookeeper, logging to /home/hduser/Downloads/hbase/bin/../logs/hbase-hduser-zookeeper-aaron.out
10.0.3.36: running zookeeper, logging to /home/hduser/Downloads/hbase/bin/../logs/hbase-hduser-zookeeper-dmacs-OptiPlex-9020.out
10.0.3.104: running zookeeper, logging to /home/hduser/Downloads/hbase/bin/../logs/hbase-hduser-zookeeper-hadoop-104.out
10.0.3.18: running zookeeper, logging to /home/hduser/Downloads/hbase/bin/../logs/hbase-hduser-zookeeper-saichanda-OptiPlex-9020.out
running master, logging to /home/hduser/Downloads/hbase/logs/hbase-hduser-master-saichanda-OptiPlex-9020.out
OpenJDK 64-Bit Server VM warning: ignoring option PermSize=128m; support was removed in 8.0
OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=128m; support was removed in 8.0
10.0.3.12: running regionserver, logging to /home/hduser/Downloads/hbase/bin/../logs/hbase-hduser-regionserver-aaron.out
10.0.3.36: running regionserver, logging to /home/hduser/Downloads/hbase/bin/../logs/hbase-hduser-regionserver-dmacs-OptiPlex-9020.out
10.0.3.104: running regionserver, logging to /home/hduser/Downloads/hbase/bin/../logs/hbase-hduser-regionserver-hadoop-104.out
10.0.3.12: OpenJDK 64-Bit Server VM warning: ignoring option PermSize=128m; support was removed in 8.0
10.0.3.12: OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=128m; support was removed in 8.0
10.0.3.36: OpenJDK 64-Bit Server VM warning: ignoring option PermSize=128m; support was removed in 8.0
10.0.3.36: OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=128m; support was removed in 8.0
10.0.3.104: OpenJDK 64-Bit Server VM warning: ignoring option PermSize=128m; support was removed in 8.0
10.0.3.104: OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=128m; support was removed in 8.0
when I run jps on namenode:
28032 SecondaryNameNode
28821 HQuorumPeer
29126 Jps
28198 ResourceManager
27720 NameNode
when I run jps on slaves:
11776 HRegionServer
11669 HQuorumPeer
11303 DataNode
11899 Jps
11436 NodeManager
What I observed was that HMaster is not running on the namenode. Can anyone help understand the problem why HMaster is crashing out. After sometime even NodeManager crashes out in the slaves. Also I observed that When I shutdown hbase, HRegionservers on the slaves donot go down, they continue to be running even after I give stop-hbase.sh command in the master node. Key warnings and errors observed in My logs are as follows.
hadoop-namenode.log: multiple times I get this Exception...
java.io.IOException: File /hbase/.tmp/hbase.version could only be replicated to 0 nodes instead of minReplication (=1). There are 0 datanode(s) running and no node(s) are excluded in this operation.
hadoop-secondary-namenode.log: multiple times I get this ERROR...
ERROR org.apache.hadoop.hdfs.server.namenode.SecondaryNameNode: Exception in doCheckpoint
java.io.IOException: Inconsistent checkpoint fields.
No error found in yarn-resourcemanager.log.
For hbase logs: in hbase-master.log:
FATAL [saichanda-OptiPlex-9020:16000.activeMasterManager] master.HMaster: Failed to become active master
File /hbase/.tmp/hbase.version could only be replicated to 0 nodes instead of minReplication (=1). There are 0 datanode(s) running and no node(s) are excluded in this operation.
In hbase-zookeeper.log: I see this line, as such no errors were there in the log.
019-01-29 10:09:49,431 INFO [main] server.NIOServerCnxnFactory: binding to port 0.0.0.0/0.0.0.0:2181
on one of the slaves, regionserver.log:
client.ZooKeeperRegistry: ClusterId read in ZooKeeper is null
on one of the slaves, hadoop-datanode.log gives multiple times the following warning.
WARN org.apache.hadoop.hdfs.server.datanode.DataNode: Problem connecting to server: localhost/127.0.0.1:9000
AMONG ALL THE ABOVE WARNINGS AND ERRORS, I FEEL THE ERROR PERTAINING TO HBASE-MASTER.LOG SEEMS CRITICAL, WHERE IT SAYS, replicated to 0 nodes instead of minReplication (=1). Please help me solve this issue.
Also, when I finally run the hbase shell, I get the error:
ERROR: Can't get master address from ZooKeeper; znode data == null
Thank you.

Hbase connection about zookeeper error

Environment : Ubuntu 14.04 , hadoop-2.2.0 , hbase-0.98.7
when i start hadoop and hbase(single node mode), both all success (I also check the website 8088 for hadoop, 60010 for hbase)
jps
4507 SecondaryNameNode
5350 HRegionServer
4197 NameNode
4795 NodeManager
3948 QuorumPeerMain
5209 HMaster
4678 ResourceManager
5831 Jps
4310 DataNode
but when i check hbase-hadoop-master-localhost.log, i found a information following
2014-10-23 14:16:11,392 INFO [main-SendThread(localhost:2181)] zookeeper.ClientCnxn: Opening socket connection to server localhost/127.0.0.1:2181. Will not attempt to authenticate using SASL (unknown error)
2014-10-23 14:16:11,426 INFO [main-SendThread(localhost:2181)] zookeeper.ClientCnxn: Socket connection established to localhost/127.0.0.1:2181, initiating session
i have google lot of website for that unknown error problem, but i can't solve this problem...
Following is my hadoop and hbase configuration
Hadoop :
salves content : localhost
core-site.xml
<configuration>
<property>
<name>fs.defaultFS</name>
<value>hdfs://localhost:8020</value>
</property>
</configuration>
yarn-site.xml
<configuration>
<property>
<name>yarn.resourcemanager.resource-tracker.address</name>
<value>localhost:9001</value>
<description>host is the hostname of the resource manager and
port is the port on which the NodeManagers contact the Resource Manager.
</description>
</property>
<property>
<name>yarn.resourcemanager.scheduler.address</name>
<value>localhost:9002</value>
<description>host is the hostname of the resourcemanager and port is the port
on which the Applications in the cluster talk to the Resource Manager.
</description>
</property>
<property>
<name>yarn.resourcemanager.scheduler.class</name>
<value>org.apache.hadoop.yarn.server.resourcemanager.scheduler.capacity.CapacityScheduler</value>
<description>In case you do not want to use the default scheduler</description>
</property>
<property>
<name>yarn.resourcemanager.address</name>
<value>localhost:9003</value>
<description>the host is the hostname of the ResourceManager and the port is the port on
which the clients can talk to the Resource Manager. </description>
</property>
<property>
<name>yarn.nodemanager.local-dirs</name>
<value></value>
<description>the local directories used by the nodemanager</description>
</property>
<property>
<name>yarn.nodemanager.address</name>
<value>localhost:9004</value>
<description>the nodemanagers bind to this port</description>
</property>
<property>
<name>yarn.nodemanager.resource.memory-mb</name>
<value>10240</value>
<description>the amount of memory on the NodeManager in GB</description>
</property>
<property>
<name>yarn.nodemanager.remote-app-log-dir</name>
<value>/app-logs</value>
<description>directory on hdfs where the application logs are moved to </description>
</property>
<property>
<name>yarn.nodemanager.log-dirs</name>
<value></value>
<description>the directories used by Nodemanagers as log directories</description>
</property>
<property>
<name>yarn.nodemanager.aux-services</name>
<value>mapreduce_shuffle</value>
<description>shuffle service that needs to be set for Map Reduce to run </description>
</property>
</configuration>
Hbase:
hbase-env.sh :
..
export JAVA_HOME="/usr/lib/jvm/java-7-oracle"
..
export HBASE_MANAGES_ZK=true
..
hbase-site.xml
<configuration>
<property>
<name>hbase.rootdir</name>
<value>hdfs://localhost:8020/hbase</value>
</property>
<property>
<name>hbase.cluster.distributed</name>
<value>true</value>
</property>
<property>
<name>hbase.zookeeper.property.clientPort</name>
<value>2181</value>
</property>
</configuration>
regionserver content : localhost
my /etc/hosts content:
127.0.0.1 localhost
#127.0.1.1 localhost
# The following lines are desirable for IPv6 capable hosts
::1 ip6-localhost ip6-loopback
fe00::0 ip6-localnet
ff00::0 ip6-mcastprefix
ff02::1 ip6-allnodes
ff02::2 ip6-allrouters
I try lots of methods to solve it, but all fail, please help me to solve it, i really need to know how to solve.
Originally, i run a mapreuce program and when map 67% reduce 0%, it print out some INFO and some of INFO is following:
14/10/23 15:50:41 INFO zookeeper.ZooKeeper: Initiating client connection, connectString=localhost:2181 sessionTimeout=60000 watcher=org.apache.hadoop.hbase.client.HConnectionManager$ClientZKWatcher#ce1472
14/10/23 15:50:41 INFO zookeeper.ClientCnxn: Opening socket connection to server localhost/127.0.0.1:2181. Will not attempt to authenticate using SASL (unknown error)
14/10/23 15:50:41 INFO zookeeper.ClientCnxn: Socket connection established to localhost/127.0.0.1:2181, initiating session
14/10/23 15:50:41 INFO zookeeper.ClientCnxn: Session establishment complete on server localhost/127.0.0.1:2181, sessionid = 0x1493be510380007, negotiated timeout = 40000
14/10/23 15:50:43 INFO mapred.LocalJobRunner: map > sort
14/10/23 15:50:46 INFO mapred.LocalJobRunner: map > sort
then it crash.. I think program maybe in dead lock and that is what i want to solve zookeeper problem above.
If want another configuration file i set in hadoop or hbase or others, just tell me, i'll post up.
thanks!
I don't think zookeeper is your problem. You should look at your other logs for more information about your map/reduce job status. Check the datanode and namenode logs for errors along with the yarn log messages through the yarn job tracker ui.
ZooKeeper Messages
Those messages are from zookeeper trying to connect with the Zookeeper sasl client. If sasl is not configured the client will still be able to connect but the connection won't be authenticated.
Error message comes from this file
ZooKeeperSaslClient.java
150 // The user did not override the default context. It might be that they just don't intend to use SASL,
151 // so log at INFO, not WARN, since they don't expect any SASL-related information.
152 String msg = "Will not attempt to authenticate using SASL ";
153 if (runtimeException != null) {
154 msg += "(" + runtimeException + ")";
155 } else {
156 msg += "(unknown error)";
157 }
158 this.configStatus = msg;
159 this.isSASLConfigured = false;
160 }
If you want to get rid of the error you will have to configure zookeeper to use sasl. Sorry don't have any experience with configuration sasl for zookeeper.
ZooKeeper SASL Configuration
Add follwing properties in hbase-site.xml file
<property>
<name>hbase.zookeeper.quorum</name>
<value>192.168.56.101</value> #this is my server ip
</property>
<property>
<name>hbase.zookeeper.property.clientPort</name>
<value>2181</value>
</property>
restart ./start-hbase.sh
This is how I solved it - after I tried including hbase-site.xml in classpath and giving the zookeeper quorum value as -Dhbase.zookeeper.quorum - and they did not work.
I copied hbase-site.xml to the same folder as my jar and then did
jar uf myjar.jar hbase-site.xml
And then I ran hadoop jar myjar.jar Blah
This fixed the problem

YARN Application Master unable to connect to Resource Manager

I have a 4 node cluster (1 Namenode/Resource Manager 3 datanodes/node managers)
I am trying to run a simple tez example orderedWordCount
hadoop jar C:\HDP\tez-0.4.0.2.1.1.0-1621\tez-mapreduce-examples-0.4.0.2.1.1.0-1621.jar orderedwordcount sample/test.txt /sample/out
The job gets accepted ,the Application master and container gets setup but on the nodemanager I see these logs
2014-09-10 17:53:31,982 INFO
[ServiceThread:org.apache.tez.dag.app.rm.TaskSchedulerEventHandler]
org.apache.hadoop.yarn.client.RMProxy: Connecting to ResourceManager
at /0.0.0.0:8030
2014-09-10 17:53:34,060 INFO
[ServiceThread:org.apache.tez.dag.app.rm.TaskSchedulerEventHandler]
org.apache.hadoop.ipc.Client: Retrying connect to server:
0.0.0.0/0.0.0.0:8030. Already tried 0 time(s); retry policy is RetryUpToMaximumCountWithFixedSleep(maxRetries=10, sleepTime=1000
MILLISECONDS)
After configurable timeout the job fails
I searched for this problem and it always pointed to yarn.resourcemanager.scheduler.address configuration. In all my resource manager node and node managers I have this configuration defined correctly but for some reason its not getting picked up
<property>
<name>yarn.resourcemanager.hostname</name>
<value>10.234.225.69</value>
</property>
<property>
<name>yarn.resourcemanager.address</name>
<value>${yarn.resourcemanager.hostname}:8032</value>
</property>
<property>
<name>yarn.resourcemanager.webapp.address</name>
<value>${yarn.resourcemanager.hostname}:8088</value>
</property>
<property>
<name>yarn.resourcemanager.scheduler.address</name>
<value>${yarn.resourcemanager.hostname}:8030</value>
</property>
<property>
<name>yarn.resourcemanager.resource-tracker.address</name>
<value>${yarn.resourcemanager.hostname}:8031</value>
</property>
<property>
<name>yarn.resourcemanager.admin.address</name>
<value>${yarn.resourcemanager.hostname}:8033</value>
</property>
It might be possible that your ResourceManager is listening on an IPv6 Port while your worker nodes (i.e NodeManagers) might be using IPv4 to connect to the ResourceManager
To quickly check if this is the case, do a
netstat -aln | grep 8030
If you get something similar to :::8030, then your ResourceManager is indeed listening on an IPv6 Port. If its a IPv4 port, you should see something similar to 0.0.0.0:8030
To fix this, you might want to consider disabling IPv6 on all your machines and try once again.
There is a problem in the Hadoop2 code with configuring the yarn.resourcemanager.scheduler.address e.g.:
<property>
<name>yarn.resourcemanager.scheduler.address</name>
<value>qadoop-nn001.apsalar.com:8030</value>
</property>
It is currently not properly placed into the 'conf' configuration at
hadoop-2.7.0/src/hadoop-yarn-project/hadoop-yarn/hadoop-yarn-common/src/main/java/org/apache/hadoop/yarn/client/RMProxy.java
To prove the issue, we patched that file to directly inject our scheduler address.
The patch below is a hack. The root cause is with the 'conf' object that needs to load the
property "yarn.resourcemanager.scheduler.address".
#Private
protected static <T> T createRMProxy(final Configuration configuration, final Class<T> protocol, RMProxy instance) throws IOException {
YarnConfiguration conf = (configuration instanceof YarnConfiguration)
? (YarnConfiguration) configuration
: new YarnConfiguration(configuration);
LOG.info("LEE: changing the conf to include yarn.resourcemanager.scheduler.address at 10.1.26.1");
conf.set("yarn.resourcemanager.scheduler.address", "10.1.26.1");
RetryPolicy retryPolicy = createRetryPolicy(conf);
if (HAUtil.isHAEnabled(conf)) {
RMFailoverProxyProvider<T> provider =
instance.createRMFailoverProxyProvider(conf, protocol);
return (T) RetryProxy.create(protocol, provider, retryPolicy);
} else {
InetSocketAddress rmAddress = instance.getRMAddress(conf, protocol);
LOG.info("LEE: Connecting to ResourceManager at " + rmAddress);
T proxy = RMProxy.<T>getProxy(conf, protocol, rmAddress);
return (T) RetryProxy.create(protocol, proxy, retryPolicy);
}
}
EDIT: we solved this problem by adding yarn-site.xml to the CLASSPATH.
there is no need to modify RMProxy.java
It is because your resource manager is not reachable. Try to ping you resource manager from other nodes and see if it works. Maintain these configs consistent across cluster.

yarn hadoop 2.4.0: info message: ipc.Client Retrying connect to server

i've searched for two days for a solution. but nothing worked.
First, i'm new to the whole hadoop/yarn/hdfs topic and want to configure a small cluster.
the message above doesn't show up everytime i run an example from the mapreduce-examples.jar
sometimes teragen works, sometimes not.
in some cases the whole job failed, in others the job finishes successfully. sometimes the job failes, without printing the message above.
14/06/08 15:42:46 INFO ipc.Client: Retrying connect to server: FQDN-HOSTNAME/XXX.XX.XX.XXX:53022. Already tried 2 time(s); retry policy is RetryUpToMaximumCountWithFixedSleep(maxRetries=3, sleepTime=1000 MILLISECONDS)
this message is print 30 times. also the port (in code example: 53022) changes with every time a job is started.
if job finished succesfuly, this is print
14/06/08 15:34:20 INFO mapred.ClientServiceDelegate: Application state is completed. FinalApplicationStatus=SUCCEEDED. Redirecting to job history server
14/06/08 15:34:20 INFO mapreduce.Job: Job job_1402234146062_0002 running in uber mode : false
14/06/08 15:34:20 INFO mapreduce.Job: map 100% reduce 100%
14/06/08 15:34:20 INFO mapreduce.Job: Job job_1402234146062_0002 completed successfully
if it fails,this is shown.
INFO mapreduce.Job: Job job_1402234146062_0005 failed with state FAILED due to: Task failed task_1402234146062_0005_m_000002
Job failed as tasks failed. failedMaps:1 failedReduces:0
in this case, some tasks failed. but in log files of nodemanager, datanode, resourcemanager, ... is no reason or message to find.
INFO mapreduce.Job: Task Id : attempt_1402234146062_0006_m_000002_1, Status : FAILED
Additional Information about my Configuration:
used OS: centOS 6.5
Java Version: OpenJDK Runtime Environment (rhel-2.4.7.1.el6_5-x86_64 u55-b13)
OpenJDK 64-Bit Server VM (build 24.51-b03, mixed mode)
yarn-site.xml
<configuration>
<!-- Site specific YARN configuration properties -->
<property>
<name>yarn.nodemanager.address</name>
<value>FQDN-HOSTNAME:8050</value>
</property>
<property>
<name>yarn.nodemanager.aux-services</name>
<value>mapreduce_shuffle</value>
</property>
<property>
<name>yarn.nodemanager.localizer.address</name>
<value>FQDN-HOSTNAME:8040</value>
</property>
<property>
<name>yarn.nodemanager.aux-services.mapreduce.shuffle.class</name>
<value>org.apache.hadoop.mapred.ShuffleHandler</value>
</property>
<property>
<name>yarn.resourcemanager.resource-tracker.address</name>
<value>FQDN-HOSTNAME:8025</value>
</property>
<property>
<name>yarn.resourcemanager.scheduler.address</name>
<value>FQDN-HOSTNAME:8030</value>
</property>
<property>
<name>yarn.resourcemanager.address</name>
<value>FQDN-HOSTNAME:8032</value>
</property>
</configuration>
hdfs-site.xml
<configuration>
<property>
<name>dfs.replication</name>
<value>2</value>
</property>
<property>
<name>dfs.permissions </name>
<value>false </value>
</property>
<property>
<name>dfs.namenode.name.dir</name>
<value>file:///var/data/hadoop/hdfs/nn</value>
</property>
<property>
<name>fs.checkpoint.dir</name>
<value>file:///var/data/hadoop/hdfs/snn</value>
</property>
<property>
<name>fs.checkpoint.edits.dir</name>
<value>file:///var/data/hadoop/hdfs/snn</value>
<name>fs.checkpoint.edits.dir</name>
<value>file:///var/data/hadoop/hdfs/snn</value>
</property>
<property>
<name>dfs.datanode.data.dir</name>
<value>file:///var/data/hadoop/hdfs/dn</value>
</property>
</configuration>
mapred-site.xml
<configuration>
<property>
<name>mapreduce.framework.name</name>
<value>yarn</value>
</property>
<property>
<name>mapreduce.cluster.temp.dir</name>
<value>/mapred/tempDir</value>
</property>
<property>
<name>mapreduce.cluster.local.dir</name>
<value>/mapred/localDir</value>
</property>
<property>
<name>mapreduce.jobhistory.address</name>
<value>FQDN-HOSTNAME:10020</value>
</property>
</configuration>
I hope somebody could help me. :)
Thank you,
Norman
The job finishes sometimes successfully because when you have one reducer and that reduce task by chance is sent to a working node manager then it becomes successful job.
You have to make sure that FQDN-HOSTNAME is written exactly the same way in the slaves file. If I remember correctly, my solution was that I removed the entry for the hostname mapping in /etc/hosts, that is commenting it out like this:
#127.0.0.1 FQDN-HOSTNAME
This is a bug in how the MR AppMaster starts up with ephemeral ports. It exists in Hadoop 2.6.0 release version as well.
I have figured out a fix to this bug and created a JIRA on the MAPREDUCE project along with a comment on how to fix it.
https://issues.apache.org/jira/browse/MAPREDUCE-6338
Another possible solution for this, is to check for the firewall in all the nodes.
If you're dealing with iptables, you can run this on every node:
# /etc/init.d/iptables save
# /etc/init.d/iptables stop
That will stop the firewall until next restart, but it should be enough for you to test the cluster. You don't have to restart yarn or anything, just run the job again.
If you want to completely stop the FW:
# chkconfig iptables off
Definitely a bug, this post provides a clearer insight into what is happening.
https://groups.google.com/a/cloudera.org/forum/#!msg/cdh-user/P1rfMQmYVWk/eARZXHUTkW0J
We are planning on getting around this issue by reducing the ephemeral port range, thus limiting what ports are grabbed, and then configuring iptables to allow for that port range. Setting the port ranges is explained here -
http://www.ncftp.com/ncftpd/doc/misc/ephemeral_ports.html
if you see a message like
INFO ipc.Client: Retrying connect to server: <hostname>/<ip>:<port>. Already tried 1 time(s); maxRetries=3
Need to check:
check your firewall between client and Node Manager
check yarn.app.mapreduce.am.job.client.port-range by default the he range is all possible ports
Wow! Are these answers for real?? Talking about FQDN when the job clearly completes...as long as firewall is disabled?? And the OP even put the detailed log messages / configuration.
The problem is that yarn.app.mapreduce.am.job.client.port-range is not being honored. I'm running into it also.
Firewall off...all is well (and I can see the ephemeral ports from yarn job).
Firewall on...all times outs (eventually).
Horton completely ignores this question on other boards.
So here's a log output from a job which demonstrates the problem. In first case, I have the firewall enabled on the client(s) based on Horton's doc (along with other ports I discovered by looking very closely at my installation). You will see the process timing out...and then all of a sudden working. Because I disabled the firewall after watching the job output :)
2015-01-15 16:48:22,943 INFO [main] org.apache.hadoop.ipc.Client: Retrying connect to server: de-luster-l2723nraqsy5-ywhniidze3lb-qfk4asn77vc5/10.0.0.41:52015. Already tried 39 time(s); retry policy is RetryUpToMaximumCountWithFixedSleep(maxRetries=50, sleepTime=1000 MILLISECONDS)
2015-01-15 16:48:23,349 INFO [main] org.apache.hadoop.mapred.YarnChild: mapreduce.cluster.local.dir for child: /hadoop/yarn/local/usercache/l.admin/appcache/application_1420482341308_0020
2015-01-15 16:48:24,122 INFO [main] org.apache.hadoop.conf.Configuration.deprecation: session.id is deprecated. Instead, use dfs.metrics.session-id
2015-01-15 16:48:24,656 INFO [main] org.apache.hadoop.mapred.Task: Using ResourceCalculatorProcessTree : [ ]
2015-01-15 16:48:24,724 INFO [main] org.apache.hadoop.mapred.ReduceTask: Using ShuffleConsumerPlugin: org.apache.hadoop.mapreduce.task.reduce.Shuffle#7f94ee59
2015-01-15 16:48:24,792 INFO [main] org.apache.hadoop.mapreduce.task.reduce.MergeManagerImpl: MergerManager: memoryLimit=534354336, maxSingleShuffleLimit=133588584, mergeThreshold=352673888, ioSortFactor=100, memToMemMergeOutputsThreshold=100
Did ya see it?? Problem with timeout...then all of a sudden Shuffle commences. Nothing to do with FQDNs after all :)

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