I have downloaded the toolchain from following link
https://launchpad.net/gcc-arm-embedded/5.0/5-2016-q1-update/+download/gcc-arm-none-eabi-5_3-2016q1-20160330-linux.tar.bz2
i made a script to add it to environmental path
export INSTALL_ROOT=`pwd`
TOOLS_PATH=$INSTALL_ROOT/
CROSS_PATH=$TOOLS_PATH/arm-none-eabi/bin
export PATH=$TOOLS_PATH/bin:$CROSS_PATH:$PATH
# Path to cross-tools
export CROSS_COMPILE=arm-none-eabi-
export CROSS_COMPILE_APPS=arm-none-eabi-
but if i use it in cross compilation i.e. using ./configure --error comes
./configure --host=arm-none-eabi
checking build system type... i686-pc-linux-gnu
checking host system type... arm-none-eabi
checking target system type... arm-none-eabi
checking for arm-none-eabi-gcc... arm-none-eabi-gcc
checking whether the C compiler works... no
aconfigure: error: in `/home/sameer/Downloads/pjsip_experiment/0706/pjproject-2.4.5':
aconfigure: error: C compiler cannot create executables
See `config.log' for more details
if i just compile a helloworld program then also error comes
arm-none-eabi-gcc hello.c -o out
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-exit.o): In function `exit':
exit.c:(.text.exit+0x2c): undefined reference to `_exit'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-sbrkr.o): In function `_sbrk_r':
sbrkr.c:(.text._sbrk_r+0x18): undefined reference to `_sbrk'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-writer.o): In function `_write_r':
writer.c:(.text._write_r+0x24): undefined reference to `_write'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-closer.o): In function `_close_r':
closer.c:(.text._close_r+0x18): undefined reference to `_close'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-fstatr.o): In function `_fstat_r':
fstatr.c:(.text._fstat_r+0x20): undefined reference to `_fstat'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-isattyr.o): In function `_isatty_r':
isattyr.c:(.text._isatty_r+0x18): undefined reference to `_isatty'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-lseekr.o): In function `_lseek_r':
lseekr.c:(.text._lseek_r+0x24): undefined reference to `_lseek'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-readr.o): In function `_read_r':
readr.c:(.text._read_r+0x24): undefined reference to `_read'
collect2: error: ld returned 1 exit status
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-exit.o): In function `exit':
exit.c:(.text.exit+0x2c): undefined reference to `_exit'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-sbrkr.o): In function `_sbrk_r':
sbrkr.c:(.text._sbrk_r+0x18): undefined reference to `_sbrk'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-writer.o): In function `_write_r':
writer.c:(.text._write_r+0x24): undefined reference to `_write'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-closer.o): In function `_close_r':
closer.c:(.text._close_r+0x18): undefined reference to `_close'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-fstatr.o): In function `_fstat_r':
fstatr.c:(.text._fstat_r+0x20): undefined reference to `_fstat'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-isattyr.o): In function `_isatty_r':
isattyr.c:(.text._isatty_r+0x18): undefined reference to `_isatty'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-lseekr.o): In function `_lseek_r':
lseekr.c:(.text._lseek_r+0x24): undefined reference to `_lseek'
/home/sameer/Downloads/toolchain/gcc-arm-none-eabi-5_3-2016q1/bin/../lib/gcc/arm-none-eabi/5.3.1/../../../../arm-none-eabi/lib/libc.a(lib_a-readr.o): In function `_read_r':
readr.c:(.text._read_r+0x24): undefined reference to `_read'
collect2: error: ld returned 1 exit status
What is wrong ?
Related
I got an error when compiling glibc and googled it for a long time and didn't get it! This is the output of the compiler:
x86_64-pc-linux-gnu-gcc -nostdlib -nostartfiles -shared -o /mnt/g/gcc/build/build-glibc-2.35/elf/ld.so.new \
-Wl,-z,combreloc -Wl,-z,relro -Wl,--hash-style=both -Wl,-z,defs \
/mnt/g/gcc/build/build-glibc-2.35/elf/librtld.os -Wl,--version-script=/mnt/g/gcc/build/build-glibc-2.35/ld.ma\
-Wl,-soname=ld-linux-x86-64.so.2 \
-Wl,-defsym=_begin=0
/usr/sbin/ld: /mnt/g/gcc/build/build-glibc-2.35/elf/librtld.os: in function `_dl_make_stacks_executable':
/mnt/g/gcc/build/glibc-2.35/elf/../sysdeps/unix/sysv/linux/dl-execstack.c:69: undefined reference to `__lll_lock_wait_private'
/usr/sbin/ld: /mnt/g/gcc/build/glibc-2.35/elf/../sysdeps/unix/sysv/linux/dl-execstack.c:91: undefined reference to `__lll_lock_wake_private'
/usr/sbin/ld: /mnt/g/gcc/build/build-glibc-2.35/elf/librtld.os: in function `__thread_gscope_wait':
/mnt/g/gcc/build/glibc-2.35/elf/../sysdeps/nptl/dl-thread_gscope_wait.c:79: undefined reference to `__lll_lock_wake_private'
/usr/sbin/ld: /mnt/g/gcc/build/glibc-2.35/elf/../sysdeps/nptl/dl-thread_gscope_wait.c:28: undefined reference to `__lll_lock_wait_private'
/usr/sbin/ld: /mnt/g/gcc/build/build-glibc-2.35/elf/librtld.os: in function `_dl_init_static_tls':
/mnt/g/gcc/build/glibc-2.35/elf/../elf/dl-tls.c:1092: undefined reference to `__lll_lock_wait_private'
/usr/sbin/ld: /mnt/g/gcc/build/glibc-2.35/elf/../elf/dl-tls.c:1103: undefined reference to `__lll_lock_wake_private'
I need help with compilation of P3DFFT. I'm literally lost in the process, because the compiler is complaining about "undefined reference" to lots of symbols, but those symbols are present in the libraries.
My command:
mpicc -g -O2 -I../../include -L/home/martin/fftw3/libs -lfftw3 /home/martin/p3dfft/build/libp3dfft.a driver_rand.c -o driver_rand
Compiler output:
driver_rand.c: In function ‘main’:
driver_rand.c:114:10: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp,"%d %d %d %d %d\n",&nx,&ny,&nz,&ndim,&n);
^
driver_rand.c:137:8: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp,"%d %d\n",dims,dims+1);
^
/tmp/cc52N8Sc.o: In function `Cp3dfft_setup':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:90: undefined reference to `p3dfft_setup'
/tmp/cc52N8Sc.o: In function `Cp3dfft_get_dims':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:100: undefined reference to `p3dfft_get_dims'
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:100: undefined reference to `p3dfft_get_dims'
/tmp/cc52N8Sc.o: In function `Cp3dfft_clean':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:95: undefined reference to `p3dfft_clean'
/tmp/cc52N8Sc.o: In function `Cget_timers':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:105: undefined reference to `get_timers'
/tmp/cc52N8Sc.o: In function `Cset_timers':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:110: undefined reference to `set_timers'
/tmp/cc52N8Sc.o: In function `Cp3dfft_ftran_r2c':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:117: undefined reference to `p3dfft_ftran_r2c'
/tmp/cc52N8Sc.o: In function `Cp3dfft_btran_c2r':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:130: undefined reference to `p3dfft_btran_c2r'
/tmp/cc52N8Sc.o: In function `main':
/home/martin/p3dfft/sample/C/driver_rand.c:106: undefined reference to `set_timers'
/tmp/cc52N8Sc.o: In function `Cp3dfft_setup':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:90: undefined reference to `p3dfft_setup'
/tmp/cc52N8Sc.o: In function `Cp3dfft_get_dims':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:100: undefined reference to `p3dfft_get_dims'
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:100: undefined reference to `p3dfft_get_dims'
/tmp/cc52N8Sc.o: In function `Cp3dfft_ftran_r2c':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:117: undefined reference to `p3dfft_ftran_r2c'
/tmp/cc52N8Sc.o: In function `Cp3dfft_btran_c2r':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:130: undefined reference to `p3dfft_btran_c2r'
/tmp/cc52N8Sc.o: In function `Cp3dfft_clean':
/home/martin/p3dfft/sample/C/../../include/p3dfft.h:95: undefined reference to `p3dfft_clean'
/tmp/cc52N8Sc.o: In function `main':
/home/martin/p3dfft/sample/C/driver_rand.c:258: undefined reference to `get_timers'
collect2: error: ld returned 1 exit status
Undefined symbols ARE present in libp3dfft.a:
nm ../../build/libp3dfft.a --defined-only | grep 'p3dfft_setup'
000000000000d030 T __p3dfft_MOD_p3dfft_setup
0000000000010ed0 T p3dfft_setup
nm ../../build/libp3dfft.a --defined-only | grep 'get_timers'
00000000000052f0 T get_timers
0000000000005230 T __p3dfft_MOD_get_timers
Do you have ANY idea what am I doing wrong?
I'm not familiar with your particular compiler, but I think you may need to correct the order of the source file and the libraries on your command line, i.e.
mpicc -g -O2 -I../../include -L/home/martin/fftw3/libs -lfftw3 /home/martin/p3dfft/build/libp3dfft.a driver_rand.c -o driver_rand
should probably be:
mpicc -g -O2 -I../../include driver_rand.c /home/martin/p3dfft/build/libp3dfft.a -L/home/martin/fftw3/libs -lfftw3 -o driver_rand
I'm attempting to follow the steps on http://llvm.org/docs/tutorial/LangImpl3.html to build the example.
based on
Building llvm examples
#error "Must #define __STDC_LIMIT_MACROS before #including Support/DataTypes.h"
Why am I getting "undefined reference to `dladdr'" even with -ldl for this simple program?
I've ended up with the command
clang++ -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -std=c++11 -g -O3 toy.cpp `llvm-config --libs core --cppflags --ldflags` -o toy
which is giving
/usr/local/lib/libLLVMSupport.a(Mutex.o): In function `llvm::sys::MutexImpl::MutexImpl(bool)':
/home/abdev/llvmHome/llvm/lib/Support/Mutex.cpp:53: undefined reference to `pthread_mutexattr_init'
/home/abdev/llvmHome/llvm/lib/Support/Mutex.cpp:59: undefined reference to `pthread_mutexattr_settype'
/home/abdev/llvmHome/llvm/lib/Support/Mutex.cpp:67: undefined reference to `pthread_mutexattr_destroy'
/usr/local/lib/libLLVMSupport.a(Mutex.o): In function `llvm::sys::MutexImpl::tryacquire()':
/home/abdev/llvmHome/llvm/lib/Support/Mutex.cpp:109: undefined reference to `pthread_mutex_trylock'
/usr/local/lib/libLLVMSupport.a(RWMutex.o): In function `llvm::sys::RWMutexImpl::RWMutexImpl()':
/home/abdev/llvmHome/llvm/lib/Support/RWMutex.cpp:59: undefined reference to `pthread_rwlock_init'
/usr/local/lib/libLLVMSupport.a(RWMutex.o): In function `llvm::sys::RWMutexImpl::~RWMutexImpl()':
/home/abdev/llvmHome/llvm/lib/Support/RWMutex.cpp:72: undefined reference to `pthread_rwlock_destroy'
/usr/local/lib/libLLVMSupport.a(RWMutex.o): In function `llvm::sys::RWMutexImpl::reader_acquire()':
/home/abdev/llvmHome/llvm/lib/Support/RWMutex.cpp:82: undefined reference to `pthread_rwlock_rdlock'
/usr/local/lib/libLLVMSupport.a(RWMutex.o): In function `llvm::sys::RWMutexImpl::reader_release()':
/home/abdev/llvmHome/llvm/lib/Support/RWMutex.cpp:92: undefined reference to `pthread_rwlock_unlock'
/usr/local/lib/libLLVMSupport.a(RWMutex.o): In function `llvm::sys::RWMutexImpl::writer_acquire()':
/home/abdev/llvmHome/llvm/lib/Support/RWMutex.cpp:102: undefined reference to `pthread_rwlock_wrlock'
/usr/local/lib/libLLVMSupport.a(RWMutex.o): In function `llvm::sys::RWMutexImpl::writer_release()':
/home/abdev/llvmHome/llvm/lib/Support/RWMutex.cpp:112: undefined reference to `pthread_rwlock_unlock'
/usr/local/lib/libLLVMSupport.a(Signals.o): In function `llvm::sys::PrintStackTrace(_IO_FILE*)':
/home/abdev/llvmHome/llvm/lib/Support/Unix/Signals.inc:278: undefined reference to `dladdr'
/home/abdev/llvmHome/llvm/lib/Support/Unix/Signals.inc:290: undefined reference to `dladdr'
/usr/local/lib/libLLVMSupport.a(ThreadLocal.o): In function `llvm::sys::ThreadLocalImpl::ThreadLocalImpl()':
/home/abdev/llvmHome/llvm/lib/Support/ThreadLocal.cpp:56: undefined reference to `pthread_key_create'
/usr/local/lib/libLLVMSupport.a(ThreadLocal.o): In function `llvm::sys::ThreadLocalImpl::~ThreadLocalImpl()':
/home/abdev/llvmHome/llvm/lib/Support/ThreadLocal.cpp:63: undefined reference to `pthread_key_delete'
/usr/local/lib/libLLVMSupport.a(ThreadLocal.o): In function `llvm::sys::ThreadLocalImpl::setInstance(void const*)':
/home/abdev/llvmHome/llvm/lib/Support/ThreadLocal.cpp:70: undefined reference to `pthread_setspecific'
/usr/local/lib/libLLVMSupport.a(ThreadLocal.o): In function `llvm::sys::ThreadLocalImpl::getInstance()':
/home/abdev/llvmHome/llvm/lib/Support/ThreadLocal.cpp:77: undefined reference to `pthread_getspecific'
/usr/local/lib/libLLVMSupport.a(Threading.o): In function `llvm::llvm_execute_on_thread(void (*)(void*), void*, unsigned int)':
/home/abdev/llvmHome/llvm/lib/Support/Threading.cpp:91: undefined reference to `pthread_attr_setstacksize'
/home/abdev/llvmHome/llvm/lib/Support/Threading.cpp:96: undefined reference to `pthread_create'
/home/abdev/llvmHome/llvm/lib/Support/Threading.cpp:100: undefined reference to `pthread_join'
clang: error: linker command failed with exit code 1 (use -v to see invocation)
Am I missing a library, or is some of the order incorrect?
I believe you need to link with -lpthread or just -pthread
I'm trying to develop a packet analyzer with CUDA support for pattern matching. I'm using GTK+ for GUI creation but I am not able to compile the GUI file together with the cuda files. How to write makefile for this case?
The project is having two parts: 1. Analyzer 2. GUI
Analyzer consists of many .c,.h files and one .cu file.
GUI part has only one file gui.c
I have included packet_analyzer.h in gui.c.
I tried the following makefile
all: guitest
guitest: gui.o list.o queue.o Word.o dictionary.o packet_capturer.o rule.o aho-corasick.o aho-corasick_cuda.o packet_analyzer.o
gcc -lpcap -lpthread `pkg-config --cflags --libs gtk+-2.0` gui.o list.o queue.o Word.o dictionary.o packet_capturer.o rule.o aho-corasick.o aho-corasick_cuda.o packet_analyzer.o
gui.o: gui.c
gcc -lpcap -lpthread -c `pkg-config --cflags --libs gtk+-2.0` gui.c
list.o : list.c
gcc -c list.c
queue.o : queue.c
gcc -c queue.c
Word.o : Word.c Word.h
gcc -c Word.c
dictionary.o : dictionary.c
gcc -c dictionary.c
rule.o : rule.c rule.h
gcc -c rule.c rule.h
packet_capturer.o : packet_capturer.c
gcc -lpcap -lpthread -c packet_capturer.c
aho-corasick.o : aho-corasick.c
gcc -lpcap -lpthread -c aho-corasick.c
aho-corasick_cuda.o : aho-corasick_cuda.cu
nvcc -lpcap -lpthread -c aho-corasick_cuda.cu
packet_analyzer.o : packet_analyzer.c
gcc -lpcap -lpthread -c packet_analyzer.c
clean:
rm -rf *o guitest
i end up with the following errors:
aho-corasick_cuda.o: In function `transfer_tries_from_hosttodevice(int, int, int)':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x37): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x5d): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x86): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0xac): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0xd5): undefined reference to `cudaMalloc'
aho-corasick_cuda.o:tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0xfb): more undefined references to `cudaMalloc' follow
aho-corasick_cuda.o: In function `transfer_tries_from_hosttodevice(int, int, int)':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x132): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x166): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x19d): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x1d1): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x208): undefined reference to `cudaMemcpy'
aho-corasick_cuda.o:tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x23c): more undefined references to `cudaMemcpy' follow
aho-corasick_cuda.o: In function `transfer_packets_from_hosttodevice(void*)':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x3b1): undefined reference to `Queue_dequeue(Queue*)'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x519): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x52b): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x53d): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x56b): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x58b): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x5ab): undefined reference to `cudaMemcpy'
aho-corasick_cuda.o: In function `analyze_packets(void*)':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x663): undefined reference to `cudaMalloc'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x683): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x6dd): undefined reference to `cudaConfigureCall'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x777): undefined reference to `cudaMemcpy'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x78a): undefined reference to `Queue_dequeue(Queue*)'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x7d5): undefined reference to `Queue_enqueue(Queue*, void*)'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x7f3): undefined reference to `cudaFree'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x802): undefined reference to `cudaFree'
aho-corasick_cuda.o: In function `__cudaUnregisterBinaryUtil()':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x824): undefined reference to `__cudaUnregisterFatBinary'
aho-corasick_cuda.o: In function `__device_stub__Z14AC_search_CudaPiS_S_S_S_S_S_S_PhiS_(int*, int*, int*, int*, int*, int*, int*, int*, unsigned char*, int, int*)':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x85c): undefined reference to `cudaSetupArgument'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x87f): undefined reference to `cudaSetupArgument'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x8a2): undefined reference to `cudaSetupArgument'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x8c5): undefined reference to `cudaSetupArgument'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x8e8): undefined reference to `cudaSetupArgument'
aho-corasick_cuda.o:tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0x90b): more undefined references to `cudaSetupArgument' follow
aho-corasick_cuda.o: In function `__sti____cudaRegisterAll_52_tmpxft_00001608_00000000_4_aho_corasick_cuda_cpp1_ii_9958a654()':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0xa82): undefined reference to `__cudaRegisterFatBinary'
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text+0xae3): undefined reference to `__cudaRegisterFunction'
aho-corasick_cuda.o: In function `cudaError cudaLaunch<char>(char*)':
tmpxft_00001608_00000000-1_aho-corasick_cuda.cudafe1.cpp:(.text._Z10cudaLaunchIcE9cudaErrorPT_[cudaError cudaLaunch<char>(char*)]+0x14): undefined reference to `cudaLaunch'
aho-corasick_cuda.o:(.eh_frame+0x12): undefined reference to `__gxx_personality_v0'
collect2: ld returned 1 exit status
make: *** [guitest] Error 1
You need to link with the CUDA runtime library. Add -lcudart to your link command (and CUDA lib path if necessary).
It's the nvcc -lpcap -lpthread $(ANALYZER) -o packet_analyzer.o line that's failing, right? With the -o option, you're telling it to build a complete executable, not just the object files. It needs a main function to do that, which I presume you don't have in any of the $(ANALYZER) files. Instead, try compiling all the sources with the -c flag (like you've done with gcc for gui.c), and then wrap it all together and link it with the other gcc command.
http://www.boost.org/doc/libs/1_38_0/doc/html/boost_asio/example/allocation/server.cpp
g++ -L./lib/boost_1_41_0/ -L./lib/soci-3.0.0/ -L/usr/lib/ -L/usr/local/lib/ -L./ -I/usr/include -I./lib/boost_1_41_0 -o main server.o -lssl -pthread
server.o: In function `error_code':
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:315: undefined reference to `boost::system::get_system_category()'
server.o: In function `get_system_category':
/test/mycode/./lib/boost_1_41_0/boost/asio/error.hpp:218: undefined reference to `boost::system::get_system_category()'
server.o: In function `error_code':
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:315: undefined reference to `boost::system::get_system_category()'
server.o: In function `__static_initialization_and_destruction_0':
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:208: undefined reference to `boost::system::get_system_category()'
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:209: undefined reference to `boost::system::get_generic_category()'
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:214: undefined reference to `boost::system::get_generic_category()'
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:215: undefined reference to `boost::system::get_generic_category()'
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:216: undefined reference to `boost::system::get_system_category()'
server.o: In function `error_code':
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:315: undefined reference to `boost::system::get_system_category()'
server.o: In function `get_system_category':
/test/mycode/./lib/boost_1_41_0/boost/asio/error.hpp:218: undefined reference to `boost::system::get_system_category()'
server.o: In function `error_code':
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:315: undefined reference to `boost::system::get_system_category()'
/test/mycode/./lib/boost_1_41_0/boost/system/error_code.hpp:315: undefined reference to `boost::system::get_system_category()'
server.o:/test/mycode/./lib/boost_1_41_0/boost/asio/error.hpp:218: more undefined references to `boost::system::get_system_category()' follow
collect2: ld returned 1 exit status
make: *** [main] Error 1
How to remove the above error
You want -lboost_system.
The Boost build system builds multiple variants of a single library. For example, a thread safe version of that library is -lboost_system-mt. To understand how the variants are named, see the Boost documentation.