I need to build RXTX (http://rxtx.qbang.org/wiki/index.php/Main_Page) for a 64 bit platform with --disable-locks. ( the target platform is a Ubuntu Snappy platform so there is a problem with the permissions and lock files).
The .configure --disable-locks and make seemed to run ok.
I got a new .jar file and librxtxSerial.so as a result.
However when I installed them, I get the following error :
java.lang.UnsatisfiedLinkError: gnu.io.RXTXCommDriver.nativeGetVersion()Ljava/lang/String; thrown while loading gnu.io.RXTXCommDriver
java.lang.NoClassDefFoundError: Could not initialize class gnu.io.RXTXCommDriver thrown while loading gnu.io.RXTXCommDriver
Is there something else I need to do?
Are there other object files I need to copy over.
Thanks in advance.
I solved the problem myself.
The problem was that the configure script was not expecting a java version higher than 1.5 as shown here in t he extract :
case $JAVA_VERSION in
1.2*|1.3*|1.4*|1.5*)
#fix_parameters $JPATH/jre/lib/javax.comm.properties
CLASSPATH=".:\$(TOP):\$(TOP)/src:"find $JPATH/ -name RXTXcomm.jar |head -n1
RXTX_PATH="\$(JPATH)/jre/lib/\$(OS_ARCH)"
JHOME=$JPATH/"jre/lib/ext"
So the paths were not being set up correctly for me.
I changed it to
case $JAVA_VERSION in
1.2*|1.3*|1.4*|1.5*|1.7*)
Then it worked ok.
Related
I am trying to get RODBC to work on heroku. I have a rails app that calls an R script from RinRuby, which then queries the production database in order to do some analysis. It all works fine on my local Mac, so I thought the best approach was to use the binary compiled on my Max (psqlodbcw.so) into my repo, and reference it in production as well. Unfortunately, when I try to make the connection in production using this connection string:
> library(RODBC)
> dbhandle <- odbcDriverConnect('driver=./psqlodbcw.so;database=nw_server_production;trusted_connection=true;uid=nw_server')
Warning messages:
1: In odbcDriverConnect("driver=./psqlodbcw.so;database=<db_name>;trusted_connection=true;uid=<user>") :
[RODBC] ERROR: state 01000, code 0, message [unixODBC][Driver Manager]Can't open lib './psqlodbcw.so' : file not found
2: In odbcDriverConnect("driver=./psqlodbcw.so;database=<db_name>;trusted_connection=true;uid=<user>?") :
ODBC connection failed
I have seen this error in a similar post online here, but using SQL server instead of postgres. But the accepted answer on that post doesn't explain why the file isn't found, despite being in the app directory. I did follow the same approach and made my own custom buildpack (available here: https://github.com/NovaWulf/r-rodbc-buildpack). I replaced the .so file with the one I compiled on my mac, and simply deleted the .rll file and the code that copies it, since I don't have that file (and hopefully don't need it for psqlodbc?). When I run that buildpack it runs without error on heroku, but then when I reference the .so file copied from the buildpack, I get the same "file not found" error.
Is this happening because the .so file was compiled on the wrong system architecture? I tried compiling psqlodbc on linux, but I do not get a psqlodbcq.so file when I do that (let alone an .rll file). The closest thing I get is a file called libodbcpsqlS.so, which is a setup file, not a driver file.
Could someone please help me understand the best approach to this problem? Why is heroku not seeing the file that is not there? And what is the best solution? Is there a simple way to just download the correct driver file somewhere?
Any help is much appreciated!
Best,
Paul
I want to build a PetaLinux Image for my Ultra96v2.
I followed this guide up until building my application project in Vitis. It looks promising but then while building the application project for my custom platform, Vitis throws this error:
18:08:28 **** Incremental Build of configuration Debug for project dpu_appl_system ****
make all
Generating bif file for the system project
Executing command '::scw::generate_bif -xpfm /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_demo/export/dpu_demo/dpu_demo.xpfm -domains linux_domain -bifpath /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl_system/Debug/system.bif' on XSCT
sdcard_gen --xpfm /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_demo/export/dpu_demo/dpu_demo.xpfm --sys_config dpu_demo --bif /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl_system/Debug/system.bif --bitstream /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl/_ide/bitstream/dpu_hardware.bit --sd_file /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl/Debug/dpu_appl.elf
creating BOOT.BIN using /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl/_ide/bitstream/dpu_hardware.bit
Running /home/user/Xilinx/Vitis/2021.2/bin/bootgen -arch zynqmp -image /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl_system/Debug/sd_card_temp/boot.bif -w -o i BOOT.BIN
ERROR:BootGen - syntax error
Line #13, "/media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl_system/Debug/sd_card_temp/boot.bif".
... emo/sw/atf,dpu_demo/boot/bl31.elf
^
[ERROR] : BIF file parsing failed with code 1
Error writing SD card data : Error when running '/home/user/Xilinx/Vitis/2021.2/bin/bootgen -arch zynqmp -image /media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl_system/Debug/sd_card_temp/boot.bif -w -o i BOOT.BIN'
make: *** [makefile:42: package] Error 1
18:08:36 Build Finished (took 7s.643ms)
It specifically shows me, that there is a comma in the path where it searches for the file. The files are available
at the "normal" location, without the "atf,", "dtb,", etc
at the "weird" location. I created the path so the requested path exists for every file that throws an error message, like
/media/user/6b04b610-ff80-4702-a575-b0b1a78fbafb/dpu_pkg/dpu_appl_system/Debug/sd_card_temp/boot.bif". ... emo/sw/atf,dpu_demo/boot/bl31.elf
I created the path with the weird artefact "arf,dpu_demo", with the komma in the path, but still it wont work. Is this some kind of problem with Vitis, like some env variables not set correctly, or is the building mechanism just acting weird? I cant resolve this issue, because I am not able to change the paths it is supposed to look for the files. This hinders me in advancing my project. I work on Ubuntu 20.04.
Can anyone help me out here, please? I would really appreciate it!
I asked this question in the Xilinx Community, too, but unfortunately there was no resonance at all.
Thank you so much in advance!
PLEASE READ THE WHOLE ANSWER FOR ACTUAL SOLUTION
I think I got it now, though I did not verify whether the image actually works on my Ultra96v2, yet.
I noticed, that the weird path with commata is inside of the boot.bif and system.bif.
So the first time I tried to build it, the bif wasnt there, but got created (I assume). The bif was ready then but only had a weird path inside, so I took the makefile (you can find it in debug/sd_card), copied it, and just commented out the line GENERATE_BIF_XSCT_CMD = ${GENERATE_BIF} -xpfm ${XPFM_PATH} -domains ${DOMAINS} -bifpath ${BIF_PATH}.
Then I edited the boot.bif and system.bif and changed the atf,boot, uboot,boot, and dts,boot to just boot, so the BootGen wouldnt look into the directories with the commata anymore, but only the boot-directory which was specified.
Once that was set up, I executed the edited makefile in my console, by going into the sd_card-directory and executing the following command:
make -f <your_edited_makefile>
This means, that you cant press "build" in Vitis, it wont work. You build the content on your own and wont get a green check mark beside the project! Then the sd_card-directory was populated with (I assume) all necessary data to boot the Ultra96v2 from SD card. This was the content:
boot.scr
BOOT.BIN
dpu_appl.elf (your application project name, I guess)
README.txt
system.dtb
The underlying issue seem to have been that the ::scw::generate_bif created a path to look after, which didnt exist. Really weird issue, in my opinion.
UPDATE:
I just made some changes to the PetaLinux config with the petalinux-config command and rebuilt everything. Once I go to the Vitis part, I changed the system.bif within Vitis itself, and the project compiled successfully, also populating the sd_card directory, as it seems.
UPDATE 2:
Everything failed, so I tried to get to the *.bif of the Application System project. I opened it (linux.bif) and edited the "atf,", "dtb," and "uboot," out of it. Since this is only created once and references by the following files, this fixed my issue and the build was completed successfully in Vitis. So just ignore my originial answer and update.
I hope this is working and hope it will help some of you.
I have SpringToolSuite 4 installed in macOS 11 "Big Sur" running in aarch64 of Zulu11 OpenJDK 11.0.11+9-LTS . I get this error below when starting up and have added the "-clean" parameter to the two ways I use to start up.
From an Applescript: open /Applications/SpringToolSuite4.app" & " --args -clean
Or from the command line: ./SpringToolSuite4 -clean
It would seem the clean parameter is successfully sent as '-Dosgi.clean="true"' is on the last line below. However, it doesn't seem to help as this is reappearing at every restart.
Are there other ways to do an OSGi clean?
I can't edit the ini-file because macOS will clampdown on this and render the whole installation invalid. Since the clean command seems to get passed, that is likely unnecessary.
Error message:
java.lang.UnsatisfiedLinkError: ~/Library/Caches/JNA/temp/jna13221667715595625418.tmp: dlopen(~/Library/Caches/JNA/temp/jna13221667715595625418.tmp, 1): no suitable image found. Did find:
~/Library/Caches/JNA/temp/jna13221667715595625418.tmp: no matching architecture in universal wrapper
~/Library/Caches/JNA/temp/jna13221667715595625418.tmp: no matching architecture in universal wrapper
~/Library/Caches/JNA/temp/jna13221667715595625418.tmp: dlopen(~/Library/Caches/JNA/temp/jna13221667715595625418.tmp, 1): no suitable image found. Did find:
~/Library/Caches/JNA/temp/jna13221667715595625418.tmp: no matching architecture in universal wrapper
~/Library/Caches/JNA/temp/jna13221667715595625418.tmp: no matching architecture in universal wrapper
java.base/java.lang.ClassLoader$NativeLibrary.load0(Native Method)
java.base/java.lang.ClassLoader$NativeLibrary.load(ClassLoader.java:2442)
java.base/java.lang.ClassLoader$NativeLibrary.loadLibrary(ClassLoader.java:2498)
java.base/java.lang.ClassLoader.loadLibrary0(ClassLoader.java:2694)
java.base/java.lang.ClassLoader.loadLibrary(ClassLoader.java:2627)
java.base/java.lang.Runtime.load0(Runtime.java:768)
java.base/java.lang.System.load(System.java:1837)
com.sun.jna.Native.loadNativeDispatchLibraryFromClasspath(Native.java:1018)
com.sun.jna.Native.loadNativeDispatchLibrary(Native.java:988)
com.sun.jna.Native.(Native.java:195)
com.github.dockerjava.zerodep.UnixDomainSocket.(UnixDomainSocket.java:80)
com.github.dockerjava.zerodep.ApacheDockerHttpClientImpl$2.createSocket(ApacheDockerHttpClientImpl.java:124)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.io.DefaultHttpClientConnectionOperator.connect(DefaultHttpClientConnectionOperator.java:125)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.io.PoolingHttpClientConnectionManager.connect(PoolingHttpClientConnectionManager.java:409)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.InternalExecRuntime.connectEndpoint(InternalExecRuntime.java:164)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.InternalExecRuntime.connectEndpoint(InternalExecRuntime.java:174)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ConnectExec.execute(ConnectExec.java:135)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement.execute(ExecChainElement.java:51)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement$1.proceed(ExecChainElement.java:57)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ProtocolExec.execute(ProtocolExec.java:165)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement.execute(ExecChainElement.java:51)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement$1.proceed(ExecChainElement.java:57)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.HttpRequestRetryExec.execute(HttpRequestRetryExec.java:93)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement.execute(ExecChainElement.java:51)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement$1.proceed(ExecChainElement.java:57)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.RedirectExec.execute(RedirectExec.java:116)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement.execute(ExecChainElement.java:51)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement$1.proceed(ExecChainElement.java:57)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ContentCompressionExec.execute(ContentCompressionExec.java:128)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.ExecChainElement.execute(ExecChainElement.java:51)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.InternalHttpClient.doExecute(InternalHttpClient.java:178)
com.github.dockerjava.zerodep.shaded.org.apache.hc.client5.http.impl.classic.CloseableHttpClient.execute(CloseableHttpClient.java:67)
com.github.dockerjava.zerodep.ApacheDockerHttpClientImpl.execute(ApacheDockerHttpClientImpl.java:157)
com.github.dockerjava.zerodep.ZerodepDockerHttpClient.execute(ZerodepDockerHttpClient.java:8)
com.github.dockerjava.core.DefaultInvocationBuilder.execute(DefaultInvocationBuilder.java:228)
com.github.dockerjava.core.DefaultInvocationBuilder.get(DefaultInvocationBuilder.java:202)
com.github.dockerjava.core.DefaultInvocationBuilder.get(DefaultInvocationBuilder.java:75)
com.github.dockerjava.core.exec.InfoCmdExec.exec(InfoCmdExec.java:24)
com.github.dockerjava.core.exec.InfoCmdExec.exec(InfoCmdExec.java:14)
com.github.dockerjava.core.command.AbstrDockerCmd.exec(AbstrDockerCmd.java:35)
org.springframework.ide.eclipse.boot.dash.docker.runtarget.DockerRunTarget.connect(DockerRunTarget.java:130)
org.springframework.ide.eclipse.boot.dash.cloudfoundry.RemoteBootDashModel.lambda$2(RemoteBootDashModel.java:77)
org.springframework.ide.eclipse.boot.dash.model.remote.RefreshStateTracker.call(RefreshStateTracker.java:80)
org.springframework.ide.eclipse.boot.dash.model.remote.RefreshStateTracker.lambda$3(RefreshStateTracker.java:123)
org.springsource.ide.eclipse.commons.frameworks.core.util.JobUtil$6.run(JobUtil.java:193)
org.eclipse.core.internal.jobs.Worker.run(Worker.java:63)
-Dosgi.clean="true"
The issue mentioned above is this: https://github.com/spring-projects/sts4/issues/684
It is not related to OSGi, so -clean doesn't help here. The fix will be part of STS 4.12.1 release, but you could grab a nightly CI build to get the fix right away from here: http://dist.springsource.com/snapshot/STS4/nightly-distributions.html
On a related note: Once you started STS at least one you should be able to modify the .ini file without issues. If macOS still complains about it, you can remove the quarantine flag from the app:
sudo xattr -r -d com.apple.quarantine SpringToolSuite4.app
This will avoid the error message and let you start your STS4 install even after editing the content.
When I am running application on simulator or device and try to use PO command during debug. Xcode is throwing error instead of printing value. It is happening after I have updated Xcode 12.
error: virtual filesystem overlay file
/all-product-headers.yaml' not found
error: couldn't IRGen expression. Please check the above error messages for possible root causes.
What is the solution for this ?
Any help would be appreciated.
Go to /Users/<YOUR_USER>/Library/Developer/Xcode/ and delete "DerivedData" folder.
If in the path of the missing file is the name of a framework e.g. Usabilla.build/Release-iphonesimulator/Usabilla.build/all-product-headers.yaml
Try using an older version, using version 6.4.7 of Usabilla fixed the issue for me.
If the above fixes don't work, here are some info that might help:
https://steipete.com/posts/couldnt-irgen-expression/
I cant use sparkR in Rstudio because im getting some error: Error in sparkR.sparkContext(master, appName, sparkHome, sparkConfigMap, :
JVM is not ready after 10 seconds
I have tried to search for the solution but cant find one. Here is how I have tried to setup sparkR:
Sys.setenv(SPARK_HOME="C/Users/alibaba555/Downloads/spark") # The path to your spark installation
.libPaths(c(file.path(Sys.getenv("SPARK_HOME"), "R", "lib"), .libPaths()))
library("SparkR", lib.loc="C/Users/alibaba555/Downloads/spark/R") # The path to the lib folder in the spark location
library(SparkR)
sparkR.session(master="local[*]",sparkConfig=list(spark.driver.memory="2g")*
Now execution starst with a message:
Launching java with spark-submit command
C/Users/alibaba555/Downloads/spark/bin/spark-submit2.cmd
sparkr-shell
C:\Users\ALIBAB~1\AppData\Local\Temp\Rtmp00FFkx\backend_port1b90491e4622
And finally after a few minutes it returns an error message:
Error in sparkR.sparkContext(master, appName, sparkHome,
sparkConfigMap, : JVM is not ready after 10 seconds
Thanks!
It looks like the path to your spark library is wrong. It should be something like: library("SparkR", lib.loc="C/Users/alibaba555/Downloads/spark/R/lib")
I'm not sure if that will fix your problem, but it could help. Also, what versions of Spark/SparkR and Scala are you using? Did you build from source?
What seemed to be causing my issues boiled down to the working directory of our users being a networked mapped drive.
Changing the working directory fixed the issue.
If by chance you are also using databricks-connect make sure that the .databricks-connect file is copied into the %HOME% of each user who will be running Rstudio or set up databricks-connect for each of them.