Spring Rest cannot find JPARepository while deployed - spring

Question

I'm pretty new to Java, and for a University project i have to setup a Restful Service. So i had managed to do so a very simple hello world service with Intellij Idea IDE. Later on i wanted to add a database and setup some deployment options. So i setup my own Tomcat Server, and on each build i was deploying my .war to the Tomcat.
So i added my database, implemented Repository, Controller and Model, and when i'm debugging everything works just fine. Whatsoever when it gets deployed on my tomcat i get the following errors.
. ____ _ __ _ _
/\\ / ___'_ __ _ _(_)_ __ __ _ \ \ \ \
( ( )\___ | '_ | '_| | '_ \/ _` | \ \ \ \
\\/ ___)| |_)| | | | | || (_| | ) ) ) )
' |____| .__|_| |_|_| |_\__, | / / / /
=========|_|==============|___/=/_/_/_/
:: Spring Boot :: (v1.4.2.RELEASE)
2016-11-20 11:23:47.227 INFO 15920 --- [ost-startStop-1] g.d.t.backend.ServletInitializer : Starting ServletInitializer on Atlantis with PID 15920 (started by Nikolas in K:\Site\Apache Tomcat 8.5.8\bin)
2016-11-20 11:23:47.228 INFO 15920 --- [ost-startStop-1] g.d.t.backend.ServletInitializer : No active profile set, falling back to default profiles: default
2016-11-20 11:23:47.295 INFO 15920 --- [ost-startStop-1] ationConfigEmbeddedWebApplicationContext : Refreshing org.springframework.boot.context.embedded.AnnotationConfigEmbeddedWebApplicationContext#26f0ef9e: startup date [Sun Nov 20 11:23:47 EET 2016]; root of context hierarchy
2016-11-20 11:23:48.531 INFO 15920 --- [ost-startStop-1] o.s.web.context.ContextLoader : Root WebApplicationContext: initialization completed in 1235 ms
2016-11-20 11:23:49.240 INFO 15920 --- [ost-startStop-1] o.s.b.w.servlet.ServletRegistrationBean : Mapping servlet: 'dispatcherServlet' to [/]
2016-11-20 11:23:49.241 INFO 15920 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'errorPageFilter' to: [/*]
2016-11-20 11:23:49.244 INFO 15920 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'characterEncodingFilter' to: [/*]
2016-11-20 11:23:49.244 INFO 15920 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'hiddenHttpMethodFilter' to: [/*]
2016-11-20 11:23:49.244 INFO 15920 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'httpPutFormContentFilter' to: [/*]
2016-11-20 11:23:49.245 INFO 15920 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'requestContextFilter' to: [/*]
2016-11-20 11:23:49.284 WARN 15920 --- [ost-startStop-1] ationConfigEmbeddedWebApplicationContext : Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'userController': Failed to introspect bean class [gr.devian.talosquests.backend.UserController] for lookup method metadata: could not find class that it depends on; nested exception is java.lang.NoClassDefFoundError: org/springframework/data/repository/CrudRepository
2016-11-20 11:23:49.292 INFO 15920 --- [ost-startStop-1] utoConfigurationReportLoggingInitializer :
Error starting ApplicationContext. To display the auto-configuration report re-run your application with 'debug' enabled.
2016-11-20 11:23:49.298 ERROR 15920 --- [ost-startStop-1] o.s.boot.SpringApplication : Application startup failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'userController': Failed to introspect bean class [gr.devian.talosquests.backend.UserController] for lookup method metadata: could not find class that it depends on; nested exception is java.lang.NoClassDefFoundError: org/springframework/data/repository/CrudRepository
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.determineCandidateConstructors(AutowiredAnnotationBeanPostProcessor.java:269) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.determineConstructorsFromBeanPostProcessors(AbstractAutowireCapableBeanFactory.java:1073) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1046) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:512) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:754) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:866) ~[spring-context-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542) ~[spring-context-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:761) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:371) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
at org.springframework.boot.SpringApplication.run(SpringApplication.java:315) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
at org.springframework.boot.web.support.SpringBootServletInitializer.run(SpringBootServletInitializer.java:151) [spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
at org.springframework.boot.web.support.SpringBootServletInitializer.createRootApplicationContext(SpringBootServletInitializer.java:131) [spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
at org.springframework.boot.web.support.SpringBootServletInitializer.onStartup(SpringBootServletInitializer.java:86) [spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:169) [spring-web-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5178) [catalina.jar:8.5.8]
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150) [catalina.jar:8.5.8]
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:752) [catalina.jar:8.5.8]
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:728) [catalina.jar:8.5.8]
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:734) [catalina.jar:8.5.8]
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:952) [catalina.jar:8.5.8]
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1823) [catalina.jar:8.5.8]
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) [na:1.8.0_91]
at java.util.concurrent.FutureTask.run(FutureTask.java:266) [na:1.8.0_91]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [na:1.8.0_91]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_91]
at java.lang.Thread.run(Thread.java:745) [na:1.8.0_91]
Caused by: java.lang.NoClassDefFoundError: org/springframework/data/repository/CrudRepository
at java.lang.ClassLoader.defineClass1(Native Method) ~[na:1.8.0_91]
at java.lang.ClassLoader.defineClass(ClassLoader.java:763) ~[na:1.8.0_91]
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142) ~[na:1.8.0_91]
at org.apache.catalina.loader.WebappClassLoaderBase.findClassInternal(WebappClassLoaderBase.java:2268) ~[catalina.jar:8.5.8]
at org.apache.catalina.loader.WebappClassLoaderBase.findClass(WebappClassLoaderBase.java:811) ~[catalina.jar:8.5.8]
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1254) ~[catalina.jar:8.5.8]
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1119) ~[catalina.jar:8.5.8]
at java.lang.Class.getDeclaredMethods0(Native Method) ~[na:1.8.0_91]
at java.lang.Class.privateGetDeclaredMethods(Class.java:2701) ~[na:1.8.0_91]
at java.lang.Class.getDeclaredMethods(Class.java:1975) ~[na:1.8.0_91]
at org.springframework.util.ReflectionUtils.getDeclaredMethods(ReflectionUtils.java:613) ~[spring-core-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.util.ReflectionUtils.doWithMethods(ReflectionUtils.java:524) ~[spring-core-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.util.ReflectionUtils.doWithMethods(ReflectionUtils.java:510) ~[spring-core-4.3.4.RELEASE.jar:4.3.4.RELEASE]
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.determineCandidateConstructors(AutowiredAnnotationBeanPostProcessor.java:247) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
... 31 common frames omitted
Caused by: java.lang.ClassNotFoundException: org.springframework.data.repository.CrudRepository
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1285) ~[catalina.jar:8.5.8]
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1119) ~[catalina.jar:8.5.8]
... 45 common frames omitted
20-Nov-2016 11:23:49.300 SEVERE [localhost-startStop-1] org.apache.catalina.core.ContainerBase.addChildInternal ContainerBase.addChild: start:
org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[]]
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:167)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:752)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:728)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:734)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:952)
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1823)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'userController': Failed to introspect bean class [gr.devian.talosquests.backend.UserController] for lookup method metadata: could not find class that it depends on; nested exception is java.lang.NoClassDefFoundError: org/springframework/data/repository/CrudRepository
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.determineCandidateConstructors(AutowiredAnnotationBeanPostProcessor.java:269)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.determineConstructorsFromBeanPostProcessors(AbstractAutowireCapableBeanFactory.java:1073)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1046)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:512)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:754)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:866)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542)
at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122)
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:761)
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:371)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:315)
at org.springframework.boot.web.support.SpringBootServletInitializer.run(SpringBootServletInitializer.java:151)
at org.springframework.boot.web.support.SpringBootServletInitializer.createRootApplicationContext(SpringBootServletInitializer.java:131)
at org.springframework.boot.web.support.SpringBootServletInitializer.onStartup(SpringBootServletInitializer.java:86)
at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:169)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5178)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
... 10 more
Caused by: java.lang.NoClassDefFoundError: org/springframework/data/repository/CrudRepository
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:763)
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at org.apache.catalina.loader.WebappClassLoaderBase.findClassInternal(WebappClassLoaderBase.java:2268)
at org.apache.catalina.loader.WebappClassLoaderBase.findClass(WebappClassLoaderBase.java:811)
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1254)
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1119)
at java.lang.Class.getDeclaredMethods0(Native Method)
at java.lang.Class.privateGetDeclaredMethods(Class.java:2701)
at java.lang.Class.getDeclaredMethods(Class.java:1975)
at org.springframework.util.ReflectionUtils.getDeclaredMethods(ReflectionUtils.java:613)
at org.springframework.util.ReflectionUtils.doWithMethods(ReflectionUtils.java:524)
at org.springframework.util.ReflectionUtils.doWithMethods(ReflectionUtils.java:510)
at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.determineCandidateConstructors(AutowiredAnnotationBeanPostProcessor.java:247)
... 31 more
Caused by: java.lang.ClassNotFoundException: org.springframework.data.repository.CrudRepository
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1285)
at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1119)
... 45 more
20-Nov-2016 11:23:49.302 SEVERE [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployWAR Error deploying web application archive K:\Site\Apache Tomcat 8.5.8\webapps\ROOT.war
java.lang.IllegalStateException: ContainerBase.addChild: start: org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[]]
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:756)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:728)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:734)
at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:952)
at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1823)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
20-Nov-2016 11:23:49.303 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive K:\Site\Apache Tomcat 8.5.8\webapps\ROOT.war has finished in 4,956 ms
20-Nov-2016 11:23:49.305 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory K:\Site\Apache Tomcat 8.5.8\webapps\docs
20-Nov-2016 11:23:49.369 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory K:\Site\Apache Tomcat 8.5.8\webapps\docs has finished in 64 ms
20-Nov-2016 11:23:49.370 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory K:\Site\Apache Tomcat 8.5.8\webapps\examples
20-Nov-2016 11:23:49.608 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory K:\Site\Apache Tomcat 8.5.8\webapps\examples has finished in 238 ms
20-Nov-2016 11:23:49.609 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory K:\Site\Apache Tomcat 8.5.8\webapps\host-manager
20-Nov-2016 11:23:49.630 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory K:\Site\Apache Tomcat 8.5.8\webapps\host-manager has finished in 21 ms
20-Nov-2016 11:23:49.630 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory K:\Site\Apache Tomcat 8.5.8\webapps\manager
20-Nov-2016 11:23:49.655 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory K:\Site\Apache Tomcat 8.5.8\webapps\manager has finished in 25 ms
20-Nov-2016 11:23:49.660 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler [http-nio-9090]
20-Nov-2016 11:23:49.669 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler [ajp-nio-8009]
20-Nov-2016 11:23:49.670 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in 5360 ms
While Debugging on my IDE it runs just correctly. Does anyone have any idea why i'm facing this issue?
pom.xml
<parent>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>1.4.2.RELEASE</version>
<relativePath/> <!-- lookup parent from repository -->
</parent>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jpa</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter</artifactId>
</dependency>
<dependency>
<groupId>mysql</groupId>
<artifactId>mysql-connector-java</artifactId>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-test</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
</plugins>
</build>
Edit:
On my IDE it also runs on Tomcat
. ____ _ __ _ _
/\\ / ___'_ __ _ _(_)_ __ __ _ \ \ \ \
( ( )\___ | '_ | '_| | '_ \/ _` | \ \ \ \
\\/ ___)| |_)| | | | | || (_| | ) ) ) )
' |____| .__|_| |_|_| |_\__, | / / / /
=========|_|==============|___/=/_/_/_/
:: Spring Boot :: (v1.4.2.RELEASE)
2016-11-20 11:14:50.013 INFO 20380 --- [ main] g.d.t.b.TalosQuestsBackendApplication : Starting TalosQuestsBackendApplication on Atlantis with PID 20380 (C:\Users\Nikolas\IdeaProjects\TalosQuests\TalosQuestsBackend\target\classes started by Nikolas in C:\Users\Nikolas\IdeaProjects\TalosQuests\TalosQuestsBackend)
2016-11-20 11:14:50.015 INFO 20380 --- [ main] g.d.t.b.TalosQuestsBackendApplication : No active profile set, falling back to default profiles: default
2016-11-20 11:14:50.056 INFO 20380 --- [ main] ationConfigEmbeddedWebApplicationContext : Refreshing org.springframework.boot.context.embedded.AnnotationConfigEmbeddedWebApplicationContext#13b84b8: startup date [Sun Nov 20 11:14:50 EET 2016]; root of context hierarchy
2016-11-20 11:14:51.161 INFO 20380 --- [ main] trationDelegate$BeanPostProcessorChecker : Bean 'org.springframework.transaction.annotation.ProxyTransactionManagementConfiguration' of type [class org.springframework.transaction.annotation.ProxyTransactionManagementConfiguration$$EnhancerBySpringCGLIB$$9f712e35] is not eligible for getting processed by all BeanPostProcessors (for example: not eligible for auto-proxying)
2016-11-20 11:14:51.552 INFO 20380 --- [ main] s.b.c.e.t.TomcatEmbeddedServletContainer : Tomcat initialized with port(s): 8080 (http)
2016-11-20 11:14:51.562 INFO 20380 --- [ main] o.apache.catalina.core.StandardService : Starting service Tomcat
2016-11-20 11:14:51.562 INFO 20380 --- [ main] org.apache.catalina.core.StandardEngine : Starting Servlet Engine: Apache Tomcat/8.5.6
2016-11-20 11:14:51.645 INFO 20380 --- [ost-startStop-1] o.a.c.c.C.[Tomcat].[localhost].[/] : Initializing Spring embedded WebApplicationContext
2016-11-20 11:14:51.645 INFO 20380 --- [ost-startStop-1] o.s.web.context.ContextLoader : Root WebApplicationContext: initialization completed in 1592 ms
2016-11-20 11:14:51.778 INFO 20380 --- [ost-startStop-1] o.s.b.w.servlet.ServletRegistrationBean : Mapping servlet: 'dispatcherServlet' to [/]
2016-11-20 11:14:51.780 INFO 20380 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'characterEncodingFilter' to: [/*]
2016-11-20 11:14:51.781 INFO 20380 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'hiddenHttpMethodFilter' to: [/*]
2016-11-20 11:14:51.781 INFO 20380 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'httpPutFormContentFilter' to: [/*]
2016-11-20 11:14:51.781 INFO 20380 --- [ost-startStop-1] o.s.b.w.servlet.FilterRegistrationBean : Mapping filter: 'requestContextFilter' to: [/*]
2016-11-20 11:14:51.976 INFO 20380 --- [ main] j.LocalContainerEntityManagerFactoryBean : Building JPA container EntityManagerFactory for persistence unit 'default'
2016-11-20 11:14:51.990 INFO 20380 --- [ main] o.hibernate.jpa.internal.util.LogHelper : HHH000204: Processing PersistenceUnitInfo [
name: default
...]
2016-11-20 11:14:52.055 INFO 20380 --- [ main] org.hibernate.Version : HHH000412: Hibernate Core {5.0.11.Final}
2016-11-20 11:14:52.057 INFO 20380 --- [ main] org.hibernate.cfg.Environment : HHH000206: hibernate.properties not found
2016-11-20 11:14:52.060 INFO 20380 --- [ main] org.hibernate.cfg.Environment : HHH000021: Bytecode provider name : javassist
2016-11-20 11:14:52.095 INFO 20380 --- [ main] o.hibernate.annotations.common.Version : HCANN000001: Hibernate Commons Annotations {5.0.1.Final}
2016-11-20 11:14:52.403 INFO 20380 --- [ main] org.hibernate.dialect.Dialect : HHH000400: Using dialect: org.hibernate.dialect.MySQL5Dialect
2016-11-20 11:14:52.773 INFO 20380 --- [ main] org.hibernate.tool.hbm2ddl.SchemaUpdate : HHH000228: Running hbm2ddl schema update
2016-11-20 11:14:52.930 INFO 20380 --- [ main] j.LocalContainerEntityManagerFactoryBean : Initialized JPA EntityManagerFactory for persistence unit 'default'
2016-11-20 11:14:53.332 INFO 20380 --- [ main] s.w.s.m.m.a.RequestMappingHandlerAdapter : Looking for #ControllerAdvice: org.springframework.boot.context.embedded.AnnotationConfigEmbeddedWebApplicationContext#13b84b8: startup date [Sun Nov 20 11:14:50 EET 2016]; root of context hierarchy

Answer 1

The root cause of your exceptions is this one:
Caused by: java.lang.ClassNotFoundException: org.springframework.data.repository.CrudRepository
So the jar which contains this class is not on your classpath.
In order to find out why this is the case, we need more information about what you mean when you say "deployed on my tomcat". What exactly are you doing?
You can also debug it from the other side: You are probably deploying some kind of jar or war. Check what is in there. You probably find that it does not contain a spring-data-commons.jar, although it should. If this is true the question becomes:
is only that or very few jars missing?
or are basically all missing except the jar with your own code?
Note: you can unzip jar and war files, since they are just zip files