My problem is fairly simple.
I have a file that I want to run, say x.sh.
From my root location I run something like.
$ cd Desktop/./x.sh -args
It prompts me to go to the directory and then run the file.
And as prompted the following works
$ cd Desktop
$ ./x.sh -args
Now, Am I missing something here or is this just the way Ubuntu is designed to work?
You don't use cd while executing a file. Directly execute it on the prompt: Desktop/x.sh -args
You're missing something. You can either cd to the directory and run the file from that directory or you can run the file from the absolute path or relative path, provided the user you're trying to run it with has access to that directory. The following should work at the level you were trying to do cd Desktop/./x.sh -args:
./Desktop/x.sh -args
Related
I am using an ssh account that connects to an external server, i have downloaded through guix some software like samtools and bedtools but when i try to use them in my directory it gives me this error:
-bash: samtools: command not found
In my direcory, however, there is the directry guix.profile and if I go into the bin folder of this, I have everything I downloaded.
What am I doing wrong?
Thank you
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To run a file from the shell you need two things:
The shell must find the file
Being in the same directory does not enable the shell to find the file. You have to either supply an absolute or relative path the file, or have the directory in your PATH environment variable
In simplest terms this means instead of
$ samtools
try
$ ./samtools
The relative path tells the shell it wants that file
To run it from another directory, either use the whole absolute path, e.g. /home/yourname/samtools , or move the file into a directory that is on your $PATH
The file needs to be executable
If the file is not executable you will need
$ chmod +x ./samtools
How can I change my working directory in bash script in windows. I have
~dp0 = C:\test\docker\windows and I want to change my directory to C:\test\build
So it means 2 levels up and then int o build folder
Thanks
Since C:\ is mounted by default into /mnt/c this will work.
Create a .bashrc in your home path by following command:
echo "BUILDDIR=/mnt/c/test/build" >> ~/.bashrc;source ~/.bashrc
cd $BUILDDIR
# Do your work below for example ./configure.
./configure
On my system in Git bash the C:\ root is just /c/ and other dirs from there are whatever they are, so it would be cd /c/test/build/.
You could also still say cd ../../build/.
Good luck.
To change the directory using a bash script is just like you would using normal bash.
cd "C:/test/build"
echo "You're now in the folder, do what you will."
Save the file as .sh and it can be used as such.
Note, when navigation your folders using a bash script remember the directory you'll be starting from is always the home directory.
So I'm trying to write a script that will let me run a command to initialize some things. To be more specific, let's say I start in my home directory but to run this command I want I must be in a directory three folders deep into the home directory.
My script looks generically like this.
#!/bin/sh
cd home/path/to/final/directory/
command
Now usually, when I cd to this directory I can run the command on the command line and everything works fine.
When I tried to use a script to do it, the command line throws an error saying that that command isn't recognized like the computer doesn't know where to look.
The temporary fix I used was making a symbolic link to the directory I wanted but I was hoping someone could help me so that when I ssh to this node this script can be run immediately so I will not have to go into the deep directory, run the command and leave again.
Try defining full paths, for example:
#!/bin/sh
cd $HOME/path/to/final/directory && /path/to/your/command
In this case, it will try to cd into your defined directory but if it can't find the dir it will not run the command, this because of the &&
To test before running the command you could do a ls, for example:
cd $HOME/path/to/final/directory && ls
I have project structure like this
project
|app
|script
inside script folder, there are files such as 'run'
run file content:
#!/bin/bash
npm start
I want to run the file 'run' while I'm at the root of my project by typing only command 'run'. How would you do this?
This is sh file. In order to execute sh file on linux this file has to be executable.
Make sure this file has X permission.
If there is no x permission on file simply execute the command
chmod +x run.sh
Then execute the file by typing
./run.sh
For windows you need to create .bat file.
I'm not quite sure what you want but assuming you need a way to execute a file from node.js, you can use child_process module and child_process.exec method to start any executable.
Assuming the run file in the script directory is executable (if not, run chmod +x script/run), it can be executed by running ./script/run.
If you want to avoid having to type the name of the directory (script), you could append the script directory to your PATH environment variable. If you’re running a POSIX compatible shell (not csh or tcsh), this can be done using:
export PATH="$PATH:/path/to/project/script"
This will allow you to run any executable command in the script directory without having to specify the name of the directory, e.g., run.
NB: be sure that there aren’t common command names in the script directory as these commands can be run from any directory (including outside the project directory) after it has been added to the PATH. That’s also why I suggest adding it to the end of the PATH (so it’s the last directory that’s searched for executable commands).
I'm trying to learn to write shell scripts and use the Terminal.
In Users/user/Development/linux I've got a script called sysinfo_page.
So I'm in the linux folder in the terminal and I can see the sysinfo_page when I type the ls command.
However, when I enter the following command:
sysinfo_page > sysinfo_page.html
I receive the following message:
-bash: sysinfo_page: command not found
How do I resolve this?
If you want to run a script file form the current directory, you have to write ./ before your script name:
./script.sh
Your command may not be an executable file. Try this:
chmod +x sysinfo_page
./sysinfo_page > sysinfo_page.html
The first line will set the eXecutable flag on the file, the second will run it from the current dir. Note that if you want to run a file in the current directory and that dir is not included in your PATH, you need to prepend ./ or else the shell won't find it.