I have been testing code using io.Pipe to tar and gunzip files into a tar ball and then unzipping using the tar utility. The follow code passes, however the untaring process keeps getting
error:
tar: Truncated input file (needed 1050624 bytes, only 0 available)
tar: Error exit delayed from previous errors.
This issue is really driving me crazy. It has been two weeks. I really need help debugging.
Thanks.
Development enviroment: go version go1.9 darwin/amd64
package main
import (
"archive/tar"
"compress/gzip"
"fmt"
"io"
"log"
"os"
"path/filepath"
"testing"
)
func testTarGzipPipe2(t *testing.T) {
src := "/path/to/file/folder"
pr, pw := io.Pipe()
gzipWriter := gzip.NewWriter(pw)
defer gzipWriter.Close()
tarWriter := tar.NewWriter(gzipWriter)
defer tarWriter.Close()
status := make(chan bool)
go func() {
defer pr.Close()
// tar to local disk
tarFile, err := os.OpenFile("/path/to/tar/ball/test.tar.gz", os.O_RDWR|os.O_CREATE, 0755)
if err != nil {
log.Fatal(err)
}
defer tarFile.Close()
if _, err := io.Copy(tarFile, pr); err != nil {
log.Fatal(err)
}
status <- true
}()
err := filepath.Walk(src, func(path string, info os.FileInfo, err error) error {
if err != nil {
return err
}
header, err := tar.FileInfoHeader(info, info.Name())
if err != nil {
return err
}
// header.Name = strings.TrimPrefix(strings.Replace(path, src, "", -1), string(filepath.Separator))
if err := tarWriter.WriteHeader(header); err != nil {
return err
}
if info.Mode().IsDir() {
return nil
}
fmt.Println(path)
f, err := os.Open(path)
if err != nil {
return err
}
defer f.Close()
if _, err := io.Copy(tarWriter, f); err != nil {
return err
}
return nil
})
if err != nil {
log.Fatal(err)
}
pw.Close()
<-status
}
You are closing the pipe before the deferred Close calls on the gzipWriter and tarWriter. There's no error, because you're not checking the error on either of those close calls. You need to close the tarWriter, then the gzipWriter, then the PipeWriter, in that order.
However, there's no reason for the pipe at all in this code, and you can remove the goroutine and the associated coordination altogether if you write directly to the file.
tarFile, err := os.OpenFile("/tmp/test.tar.gz", os.O_RDWR|os.O_CREATE, 0644)
if err != nil {
log.Fatal(err)
}
defer tarFile.Close()
gzipWriter := gzip.NewWriter(tarFile)
defer gzipWriter.Close()
tarWriter := tar.NewWriter(gzipWriter)
defer tarWriter.Close()
Related
The process cannot access the file ... because it is being used by another process
I can't Remover Zip file with this code ..
it's possible? extract and delete the file in one code.
Code
package main
import (
"archive/zip"
"fmt"
"io"
"log"
"net/http"
"os"
"path/filepath"
"strings"
)
func main() {
url := "https://230c07c8-77b2-4c0d-9b82-8c6501a5bc45.filesusr.com/archives/b7572a_9ec985e0031042ef912cb40cafbe6376.zip?dn=7.zip"
out, _ := os.Create("E:\\experi\\1234567890.zip")
defer out.Close()
resp, _ := http.Get(url)
defer resp.Body.Close()
_, _ = io.Copy(out, resp.Body)
files, err := Unzip("E:\\experi\\1234567890.zip", "E:\\experi\\1234567890")
if err != nil {
log.Fatal(err)
}
fmt.Println("Unzipped the following files:\n" + strings.Join(files, "\n"))
}
func Unzip(src string, destination string) ([]string, error) {
var filenames []string
r, err := zip.OpenReader(src)
if err != nil {
return filenames, err
}
defer r.Close()
for _, f := range r.File {
fpath := filepath.Join(destination, f.Name)
if !strings.HasPrefix(fpath, filepath.Clean(destination)+string(os.PathSeparator)){
return filenames, fmt.Errorf("%s is an illegal filepath", fpath)
}
filenames = append(filenames, fpath)
if f.FileInfo().IsDir() {
os.MkdirAll(fpath, os.ModePerm)
continue
}
if err = os.MkdirAll(filepath.Dir(fpath), os.ModePerm); err != nil {
return filenames, err
}
outFile, err := os.OpenFile(fpath,
os.O_WRONLY|os.O_CREATE|os.O_TRUNC | os.O_RDWR,
f.Mode())
if err != nil {
return filenames, err
}
rc, err := f.Open()
if err != nil {
return filenames, err
}
_, err = io.Copy(outFile, rc)
outFile.Close()
rc.Close()
if err != nil {
return filenames, err
}
}
removeFile()
return filenames, nil
}
func removeFile() {
error := os.Remove("E:\\experi\\1234567890.zip")
if error != nil {
log.Fatal(error)
}
}
Output
output text
2020/10/28 13:09:04 remove E:\experi\1234567890.zip: The process cannot access the file because it is being used by another process.
Process finished with exit code 1
Any other way to do this same thing ?
Did I go wrong anywhere?
Help Would be Much Appreciated. Thanks in Advance. :)
out, _ := os.Create("E:\\experi\\1234567890.zip") creates or truncates the file and returns you a *File (so the file is open).
defer out.Close() closes the file "the moment the surrounding function returns" (spec).
So at the time you call Unzip you have the file open. To fix this call out.Close() before the call to Unzip (and please don't assume that calls complete without error).
If you close using the defer, it is closed after performing up to the last line of the function. You must explicitly close the file before remove it.
I am writing a simple script to get download unzip the tar.gz file and then remove it. Whenever I try to remove it I get an error:
The process cannot access the file because it is being used by another process.
I assume the error is in how I pass the file to the extractTarGz function, but I am not sure.
Here is the code:
package main
import (
"archive/tar"
"compress/gzip"
"io"
"log"
"os"
)
func main() {
f, err := os.Open("file.tar.gz")
if err != nil {
panic(err)
}
defer f.Close()
extractTarGz(f)
err = os.Remove("file.tar.gz")
}
func extractTarGz(gzipStream io.Reader) {
uncompressedStream, err := gzip.NewReader(gzipStream)
if err != nil {
log.Fatal("ExtractTarGz: NewReader failed")
}
tarReader := tar.NewReader(uncompressedStream)
for true {
header, err := tarReader.Next()
if err == io.EOF {
break
}
if err != nil {
log.Fatalf("ExtractTarGz: Next() failed: %s", err.Error())
}
switch header.Typeflag {
case tar.TypeDir:
if err := os.Mkdir(header.Name, 0755); err != nil {
log.Fatalf("ExtractTarGz: Mkdir() failed: %s", err.Error())
}
case tar.TypeReg:
outFile, err := os.Create(header.Name)
if err != nil {
log.Fatalf("ExtractTarGz: Create() failed: %s", err.Error())
}
defer outFile.Close()
if _, err := io.Copy(outFile, tarReader); err != nil {
log.Fatalf("ExtractTarGz: Copy() failed: %s", err.Error())
}
default:
log.Fatalf(
"ExtractTarGz: uknown type: %s in %s",
header.Typeflag,
header.Name)
}
}
}
You should first close the file, and then attempt to remove it. Since you close it using defer, that will / would be called after the os.Remove() call.
Try it like this:
name := "file.tar.gz"
defer func() {
if err = os.Remove(name); err != nil {
log.Printf("Failed to remove %s: %v", name, err)
}
}()
f, err := os.Open(name)
if err != nil {
panic(err)
}
defer f.Close()
extractTarGz(f)
Deferred functions are executed in LIFO (last-in-first-out) order, so first f.Close() will be called, and then the other which tries to remove the file. Quoting from Spec: Deferred statements:
...deferred functions are invoked immediately before the surrounding function returns, in the reverse order they were deferred.
f, err := os.Open("file.tar.gz")
if err != nil {
panic(err)
}
defer f.Close()
extractTarGz(f)
err = os.Remove("file.tar.gz")
At the very least, you need to close the file before you removeit.
err = f.Close()
if err != nil {
panic(err)
}
err = os.Remove("file.tar.gz")
defer f.Close() won't run until the end of the function.
My Go application outputs some amounts of text data and I need to pipe it to some external command (e.g. less). I haven't find any way to pipe this data to syscall.Exec'ed process.
As a workaround I write that text data to a temporary file and then use that file as an argument to less:
package main
import (
"io/ioutil"
"log"
"os"
"os/exec"
"syscall"
)
func main() {
content := []byte("temporary file's content")
tmpfile, err := ioutil.TempFile("", "example")
if err != nil {
log.Fatal(err)
}
defer os.Remove(tmpfile.Name()) // Never going to happen!
if _, err := tmpfile.Write(content); err != nil {
log.Fatal(err)
}
if err := tmpfile.Close(); err != nil {
log.Fatal(err)
}
binary, err := exec.LookPath("less")
if err != nil {
log.Fatal(err)
}
args := []string{"less", tmpfile.Name()}
if err := syscall.Exec(binary, args, os.Environ()); err != nil {
log.Fatal(err)
}
}
It works but leaves a temporary file on a file system, because syscall.Exec replaces the current Go process with another (less) one and deferred os.Remove won't run. Such behaviour is not desirable.
Is there any way to pipe some data to an external process without leaving any artefacts?
You should be using os/exec to build an exec.Cmd to execute, then you could supply any io.Reader you want as the stdin for the command.
From the example in the documentation:
cmd := exec.Command("tr", "a-z", "A-Z")
cmd.Stdin = strings.NewReader("some input")
var out bytes.Buffer
cmd.Stdout = &out
err := cmd.Run()
if err != nil {
log.Fatal(err)
}
fmt.Printf("in all caps: %q\n", out.String())
If you want to write directly to the command's stdin, then you call cmd.StdInPipe to get an io.WriteCloser you can write to.
If you really need to exec the process in place of your current one, you can simply remove the file before exec'ing, and provide that file descriptor as stdin for the program.
content := []byte("temporary file's content")
tmpfile, err := ioutil.TempFile("", "example")
if err != nil {
log.Fatal(err)
}
os.Remove(tmpfile.Name())
if _, err := tmpfile.Write(content); err != nil {
log.Fatal(err)
}
tmpfile.Seek(0, 0)
err = syscall.Dup2(int(tmpfile.Fd()), syscall.Stdin)
if err != nil {
log.Fatal(err)
}
binary, err := exec.LookPath("less")
if err != nil {
log.Fatal(err)
}
args := []string{"less"}
if err := syscall.Exec(binary, args, os.Environ()); err != nil {
log.Fatal(err)
}
I'm trying to download a remote file over ssh
The following approach works fine on shell
ssh hostname "tar cz /opt/local/folder" > folder.tar.gz
However the same approach on golang giving some difference in output artifact size. For example the same folders with pure shell produce artifact gz file 179B and same with go script 178B.
I assume that something has been missed from io.Reader or session got closed earlier. Kindly ask you guys to help.
Here is the example of my script:
func executeCmd(cmd, hostname string, config *ssh.ClientConfig, path string) error {
conn, _ := ssh.Dial("tcp", hostname+":22", config)
session, err := conn.NewSession()
if err != nil {
panic("Failed to create session: " + err.Error())
}
r, _ := session.StdoutPipe()
scanner := bufio.NewScanner(r)
go func() {
defer session.Close()
name := fmt.Sprintf("%s/backup_folder_%v.tar.gz", path, time.Now().Unix())
file, err := os.OpenFile(name, os.O_APPEND|os.O_WRONLY|os.O_CREATE, 0644)
if err != nil {
panic(err)
}
defer file.Close()
for scanner.Scan() {
fmt.Println(scanner.Bytes())
if err := scanner.Err(); err != nil {
fmt.Println(err)
}
if _, err = file.Write(scanner.Bytes()); err != nil {
log.Fatal(err)
}
}
}()
if err := session.Run(cmd); err != nil {
fmt.Println(err.Error())
panic("Failed to run: " + err.Error())
}
return nil
}
Thanks!
bufio.Scanner is for newline delimited text. According to the documentation, the scanner will remove the newline characters, stripping any 10s out of your binary file.
You don't need a goroutine to do the copy, because you can use session.Start to start the process asynchronously.
You probably don't need to use bufio either. You should be using io.Copy to copy the file, which has an internal buffer already on top of any buffering already done in the ssh client itself. If an additional buffer is needed for performance, wrap the session output in a bufio.Reader
Finally, you return an error value, so use it rather than panic'ing on regular error conditions.
conn, err := ssh.Dial("tcp", hostname+":22", config)
if err != nil {
return err
}
session, err := conn.NewSession()
if err != nil {
return err
}
defer session.Close()
r, err := session.StdoutPipe()
if err != nil {
return err
}
name := fmt.Sprintf("%s/backup_folder_%v.tar.gz", path, time.Now().Unix())
file, err := os.OpenFile(name, os.O_APPEND|os.O_WRONLY|os.O_CREATE, 0644)
if err != nil {
return err
}
defer file.Close()
if err := session.Start(cmd); err != nil {
return err
}
n, err := io.Copy(file, r)
if err != nil {
return err
}
if err := session.Wait(); err != nil {
return err
}
return nil
You can try doing something like this:
r, _ := session.StdoutPipe()
reader := bufio.NewReader(r)
go func() {
defer session.Close()
// open file etc
// 10 is the number of bytes you'd like to copy in one write operation
p := make([]byte, 10)
for {
n, err := reader.Read(p)
if err == io.EOF {
break
}
if err != nil {
log.Fatal("err", err)
}
if _, err = file.Write(p[:n]); err != nil {
log.Fatal(err)
}
}
}()
Make sure your goroutines are synchronized properly so output is completeky written to the file.
I've written the following code to tar a file, code works but strangely if I untar the archive the file permissions are gone so I can't read it unless I then chmod the file:
package main
import (
"archive/tar"
"io/ioutil"
"log"
"os"
)
func main() {
c, err := os.Create("/path/to/tar/file/test.tar")
if err != nil {
log.Fatalln(err)
}
tw := tar.NewWriter(c)
f, err := os.Open("sample.txt")
if err != nil {
log.Fatalln(err)
}
fi, err := f.Stat()
if err != nil {
log.Fatalln(err)
}
hdr := &tar.Header{Name: f.Name(),
Size: fi.Size(),
}
if err := tw.WriteHeader(hdr); err != nil {
log.Fatalln(err)
}
r, err := ioutil.ReadFile("sample.txt")
if err != nil {
log.Fatalln(err)
}
if _, err := tw.Write(r); err != nil {
log.Fatalln(err)
}
if err := tw.Close(); err != nil {
log.Fatalln(err)
}
}
Any idea what I'm doing wrong?
You're not preserving the original permissions of the file. You're manually creating a header, and specifying only the name and size. Instead, use tar.FileInfoHeader to build the header.
package main
import (
"archive/tar"
"io/ioutil"
"log"
"os"
)
func main() {
c, err := os.Create("/path/to/tar/file/test.tar")
if err != nil {
log.Fatalln(err)
}
tw := tar.NewWriter(c)
f, err := os.Open("sample.txt")
if err != nil {
log.Fatalln(err)
}
fi, err := f.Stat()
if err != nil {
log.Fatalln(err)
}
// create header from FileInfo
hdr, err := tar.FileInfoHeader(fi, "")
if err != nil {
log.Fatalln(err)
}
if err := tw.WriteHeader(hdr); err != nil {
log.Fatalln(err)
}
// instead of reading the whole file into memory, prefer io.Copy
r, err := io.Copy(tw, f)
if err != nil {
log.Fatalln(err)
}
log.Printf("Wrote %d bytes\n", r)
}
Also note that I used io.Copy to copy data from the file (an io.Reader) to the tar writer (an io.Writer). This will work much better for larger files.
Also - pay special attention to this note from the docs:
Because os.FileInfo's Name method returns only the base name of the file it describes, it may be necessary to modify the Name field of the returned header to provide the full path name of the file.
In this simple example, you're just using sample.txt so you shouldn't run into trouble. If you wanted to preserve a directory structure in your tar, you may have to modify the Name field in the header.