While I am trying to install any package from homebrew, it returns me this weird error.
$ brew install postgres
Error: No such file or directory # rb_sysopen - /tmp/github_api_headers20171005-1039-1blysiu
$ brew doctor
\Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry and just ignore them. Thanks!
Warning: Unbrewed header files were found in /usr/local/include.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae, and may need to be deleted.
Unexpected header files:
/usr/local/include/node/ares.h
/usr/local/include/node/ares_build.h
/usr/local/include/node/ares_rules.h
/usr/local/include/node/ares_version.h
/usr/local/include/node/nameser.h
/usr/local/include/node/pthread-fixes.h
/usr/local/include/node/v8-experimental.h
Error: No such file or directory # rb_file_s_stat - /tmp
Related
I am trying to run command
rbenv install 2.0.0-p247
I tried to follow several steps by googling the errors that I faced but I am still not able to resolve the error
I got this error
BUILD FAILED (macOS 11.4 using ruby-build 20210804)
Inspect or clean up the working tree at /var/folders/xm/rfncj90s56x8d1wdj0sl_0w40000gn/T/ruby-build.20210814020658.2987.F4rCnt
Results logged to /var/folders/xm/rfncj90s56x8d1wdj0sl_0w40000gn/T/ruby-build.20210814020658.2987.log
Last 10 log lines:
compiling ancdata.c
compiling raddrinfo.c
installing default socket libraries
compiling constants.c
1 warning generated.
linking shared-object ripper.bundle
ld: warning: directory not found for option '-L/Users/username/.rbenv/versions/2.0.0-p247/lib'
linking shared-object socket.bundle
ld: warning: directory not found for option '-L/Users/username/.rbenv/versions/2.0.0-p247/lib'
make: *** [build-ext] Error 2
The log file mentioned above has content:
https://easyupload.io/gygw5y
Ruby 2.0.0 is very much past its end of life, so I'm assuming you have a specific reason you need install it. Otherwise, you are much better off installing a modern, supported version such as 2.7.x or 3.0.x.
Older versions of ruby were built with openssl#1.0. After 1.0 went end of life, ruby-build had a breaking change to require openssl#1.1. This means that ruby versions < 2.4 can no longer be installed/built directly using ruby-build (i.e., rbenv). This GitHub issue has details.
Homebrew has removed its openssl#1.0 formula, but you can still install it via an rbenv tap. The following might work for you, though the comments in the issue report mixed results depending on the version of Command Line Tools being used.
brew install rbenv/tap/openssl#1.0
RUBY_CONFIGURE_OPTS="--with-openssl-dir=$(brew --prefix openssl#1.0)" 2.0.0-p247
Note: if you are running on an M1 (Apple Silicon) Mac, you might be out of luck. AFIK, there's no intention of getting openssl#1.0 to to work on Apple Silicon.
I'm trying to compile miniSAT on Kali Linux 64 bits but I keep getting the error message:
fatal error: zlib.h: no such file or directory
I have read that there might be a linking problem that makes the compiler unable to find the header files, but I'm new to Linux and do not know how to solve that.
You should install the development support files for zlib, try:
sudo apt-get install libz-dev
Other package names: zlib1g-dev.
If you've already zlib library, make sure you're compiling your code sources with -lz. See: missing zlib.h in ubuntu.
Install zlib from it's source, solve my similar error.
Download last version from this then:
configure
make -j4
make install
I installed Homebrew and as per the instructions ran brew doctor to find some issues.
Then I ran brew prune and moved Macports.
Apparently uninstalling Macports can cause more issues. It's in a new directory. What should I do with it?
This is what is happening:
~ $ brew doctor
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry and just ignore them. Thanks!
Warning: Broken symlinks were found. Remove them with `brew prune`:
/usr/local/bin/bbdiff
/usr/local/bin/bbedit
/usr/local/bin/bbfind
/usr/local/bin/mate
/usr/local/share/man/man1/bbdiff.1
/usr/local/share/man/man1/bbedit.1
/usr/local/share/man/man1/bbfind.1
Warning: You have MacPorts or Fink installed:
/opt/local/bin/port
This can cause trouble. You don't have to uninstall them, but you may want to
temporarily move them out of the way, e.g.
sudo mv /opt/local ~/macports
Warning: Unbrewed header files were found in /usr/local/include.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae, and may need to be deleted.
Unexpected header files:
/usr/local/include/node/ares.h
/usr/local/include/node/ares_version.h
/usr/local/include/node/nameser.h
/usr/local/include/node/node.h
/usr/local/include/node/node_buffer.h
/usr/local/include/node/node_internals.h
/usr/local/include/node/node_object_wrap.h
/usr/local/include/node/node_version.h
/usr/local/include/node/openssl/opensslconf.h
/usr/local/include/node/uv-private/ngx-queue.h
/usr/local/include/node/uv-private/stdint-msvc2008.h
/usr/local/include/node/uv-private/tree.h
/usr/local/include/node/uv-private/uv-bsd.h
/usr/local/include/node/uv-private/uv-darwin.h
/usr/local/include/node/uv-private/uv-linux.h
/usr/local/include/node/uv-private/uv-sunos.h
/usr/local/include/node/uv-private/uv-unix.h
/usr/local/include/node/uv-private/uv-win.h
/usr/local/include/node/uv.h
/usr/local/include/node/v8-debug.h
/usr/local/include/node/v8-preparser.h
/usr/local/include/node/v8-profiler.h
/usr/local/include/node/v8-testing.h
/usr/local/include/node/v8.h
/usr/local/include/node/v8stdint.h
/usr/local/include/node/zconf.h
/usr/local/include/node/zlib.h
~ $ brew prune
Pruned 0 dead formulae
Pruned 7 symbolic links from /usr/local
~ $ sudo mv /opt/local ~/macports
Password:
~ $ brew doctor
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry and just ignore them. Thanks!
Warning: Unbrewed header files were found in /usr/local/include.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae, and may need to be deleted.
Unexpected header files:
/usr/local/include/node/ares.h
/usr/local/include/node/ares_version.h
/usr/local/include/node/nameser.h
/usr/local/include/node/node.h
/usr/local/include/node/node_buffer.h
/usr/local/include/node/node_internals.h
/usr/local/include/node/node_object_wrap.h
/usr/local/include/node/node_version.h
/usr/local/include/node/openssl/opensslconf.h
/usr/local/include/node/uv-private/ngx-queue.h
/usr/local/include/node/uv-private/stdint-msvc2008.h
/usr/local/include/node/uv-private/tree.h
/usr/local/include/node/uv-private/uv-bsd.h
/usr/local/include/node/uv-private/uv-darwin.h
/usr/local/include/node/uv-private/uv-linux.h
/usr/local/include/node/uv-private/uv-sunos.h
/usr/local/include/node/uv-private/uv-unix.h
/usr/local/include/node/uv-private/uv-win.h
/usr/local/include/node/uv.h
/usr/local/include/node/v8-debug.h
/usr/local/include/node/v8-preparser.h
/usr/local/include/node/v8-profiler.h
/usr/local/include/node/v8-testing.h
/usr/local/include/node/v8.h
/usr/local/include/node/v8stdint.h
/usr/local/include/node/zconf.h
/usr/local/include/node/zlib.h
Can anyone tell me my next steps? What are "Unexpected header files?"
Thanks in advance.
I upgraded my Mac from Lion to Mountain Lion a few months ago.
I previously had PHPUnit working with my Zend Framework 1.11 without issue but had not used it much.
I now have Zend Framewoprk 2 running on a Quick Start website but I simply cannot gwet PHPUnit to work.
I've searched numerous questions related to this on Stackoverflow and tried reinstalls and path changes to php.ini without success.
I have also checked that my PEAR install is working fine, which it is but the error is the same when I try "phpunit --version"
PHP Warning: require(/usr/lib/php/PHPUnit/Autoload.php): failed to open stream: No such file or directory in /usr/bin/phpunit on line 43
Warning: require(/usr/lib/php/PHPUnit/Autoload.php): failed to open stream: No such file or directory in /usr/bin/phpunit on line 43
PHP Fatal error: require(): Failed opening required '/usr/lib/php/PHPUnit/Autoload.php' (include_path='.:/Users/johnadmin/pear/share/pear/PEAR:/Users/johnadmin/pear/share/pear:/usr/bin/phpunit:/Users/johnadmin/pear/share/pear/PHPUnit:/usr/bin/phpunit:/Users/johnadmin/pear/bin/pear') in /usr/bin/phpunit on line 43
Fatal error: require(): Failed opening required '/usr/lib/php/PHPUnit/Autoload.php' (include_path='.:/Users/johnadmin/pear/share/pear/PEAR:/Users/johnadmin/pear/share/pear:/usr/bin/phpunit:/Users/johnadmin/pear/share/pear/PHPUnit:/usr/bin/phpunit:/Users/johnadmin/pear/bin/pear') in /usr/bin/phpunit on line 43
Attempts to reinstall phpunit results in me been told phpunit is already installed and its version current.
$ sudo pear install phpunit/PHPUnit
phpunit/PHPUnit is already installed and is the same as the released version 3.7.10
install failed
Trying to uninstall fails as phpunit is a dependancy in other items/applications.
Is there anyway I can fix this or completely remove it and reinstall fresh?
include_path in my php.ini is:
include_path=".:/Users/johnadmin/pear/share/pear/PEAR:/Users/johnadmin/pear/share/pear:/usr/bin/phpunit:/Users/johnadmin/pear/share/pear/PHPUnit:/usr/bin/phpunit:/Users/johnadmin/pear/bin/pear"
Additional info in case its relevant:
> which phpunit
/usr/bin/phpunit
> which pear
/Users/johnadmin/pear/bin/pear
> which php
/usr/bin/php
Autoload.php is located in
/Users/johnadmin/pear/share/pear/PHPUnit
Additionally, the folder '/usr/lib/php/' exists but the PHPUnit directory is not under that, it is under /Users/johnadmin/pear/share/pear/PHPUnit
bash_profile content/paths
PATH=$PATH:/usr/local/Cellar/imagick/3.0.1:/usr/local/sbin:/Users/johnadmin/pear/share/pear:$
##
# Your previous /Users/johnadmin/.bash_profile file was backed up as /Users/johnadmin/.bash_$
##
# MacPorts Installer addition on 2012-04-17_at_08:37:29: adding an appropriate PATH variable$
export PATH=/opt/local/bin:/opt/local/sbin:$PATH
# Finished adapting your PATH environment variable for use with MacPorts.
##
# Your previous /Users/johnadmin/.bash_profile file was backed up as /Users/johnadmin/.bash_$
##
# MacPorts Installer addition on 2012-10-09_at_16:09:32: adding an appropriate PATH variable$
export PATH=/opt/local/bin:/opt/local/sbin:$PATH
# Finished adapting your PATH environment variable for use with MacPorts.
##
# Your previous /Users/johnadmin/.bash_profile file was backed up as /Users/johnadmin/.bash_$
##
# MacPorts Installer addition on 2012-12-06_at_13:40:25: adding an appropriate PATH variable$
export PATH=/opt/local/bin:/opt/local/sbin:$PATH
# Finished adapting your PATH environment variable for use with MacPorts.
At my wits end as I do not know what else to check frankly and any help would be a big help. Ta
John
Nevermind after hours of trying various solutions I found that creating a simlink to the PHPUnit folder worked.
Command I used was
sudo ln -s /Users/johnadmin/pear/share/pear/PHPUnit /usr/lib/php/PHPUnit
Seriously, this helped me a lot:
Install Composer (http://getcomposer.org)
composer require phpunit/phpunit 3.7.*
composer update
Three simple steps to pull PHPUnit source, and binary to your project.
I'm trying to install rpy2 for Python3 with the following command:
easy_install-3.2 rpy2
This gives a few warnings and an error:
warning: no previously-included files matching '*patch*' found anywhere in distribution
warning: no previously-included files matching '*diff*' found anywhere in distribution
warning: no previously-included files matching '.hg' found anywhere in distribution
no previously-included directories found matching 'dist'
gcc-4.2 not found, using clang instead
Compiling with an SDK that doesn't seem to exist: /Developer/SDKs/MacOSX10.6.sdk
Please check your Xcode installation
build/python3_rpy/rpy/rinterface/_rinterface.c:51:10: fatal error: 'signal.h' file not found
#include <signal.h>
^
1 error generated.
error: Setup script exited with error: command 'clang' failed with exit status 1
The file /Developer/SDKs/MacOSX10.6.sdk seems to be missing even though I have xcode 4.5.1 installed.
There is no file called MacOSX10.6.sdk in the "Downloads for Apple Developers" on the Apple home page. What do I do?
Ps. It all works well if I do not specify python3.
What is happening is that python was built with a pre-4.3 version of Xcode where the tools and SDKs were installed in /Developer. This is no longer the case with Xcode 4.3 where the tools and SDKs are part of the Xcode.app bundle. It also looks like python was compiled using gcc rather than clang.
I would recommend dumping the installation of python3 you have and installing it via macports, which will use the latest Xcode to build its ports and will therefore be able to compile additional python modules.
Once you have installed macports, simply do:
$ sudo port install python33
There is also a good chance those python modules can be installed by simply doing:
$ sudo port install whizzopymod
EDIT: Scratch that last part as macports doesn't have rpy2 for python3. You'll have to continue using easy_install I guess.