Unable to start SonarQube after migration from 6.0 -> 6.7 LTS - sonarqube

I'm trying to upgrade my SonarQube instance from a SonarQube 6.0 installation to SonarQube 6.7.
When I start SonarQube, its failing with the following exception:
2017.11.21 05:22:43 ERROR web[][o.s.s.p.Platform] Background initialization failed. Stopping SonarQube
java.lang.IllegalArgumentException: There is already a quality profile with name 'Sonar way' for language 'java'
at org.sonar.api.internal.google.common.base.Preconditions.checkArgument(Preconditions.java:145)
at org.sonar.api.server.profile.BuiltInQualityProfilesDefinition$Context.registerProfile(BuiltInQualityProfilesDefinition.java:78)
at org.sonar.api.server.profile.BuiltInQualityProfilesDefinition$Context.access$300(BuiltInQualityProfilesDefinition.java:62)
at org.sonar.api.server.profile.BuiltInQualityProfilesDefinition$NewBuiltInQualityProfileImpl.done(BuiltInQualityProfilesDefinition.java:170)
at org.sonar.server.qualityprofile.BuiltInQProfileDefinitionsBridge.define(BuiltInQProfileDefinitionsBridge.java:88)
at org.sonar.server.qualityprofile.BuiltInQProfileDefinitionsBridge.define(BuiltInQProfileDefinitionsBridge.java:67)
at org.sonar.server.qualityprofile.BuiltInQProfileRepositoryImpl.initialize(BuiltInQProfileRepositoryImpl.java:68)
at org.sonar.server.qualityprofile.BuiltInQProfileLoader.start(BuiltInQProfileLoader.java:37)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.invokeMethod(ReflectionLifecycleStrategy.java:110)
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.start(ReflectionLifecycleStrategy.java:89)
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.start(AbstractInjectionFactory.java:84)
at org.picocontainer.behaviors.AbstractBehavior.start(AbstractBehavior.java:169)
at org.picocontainer.behaviors.Stored$RealComponentLifecycle.start(Stored.java:132)
at org.picocontainer.behaviors.Stored.start(Stored.java:110)
at org.picocontainer.DefaultPicoContainer.potentiallyStartAdapter(DefaultPicoContainer.java:1016)
at org.picocontainer.DefaultPicoContainer.startAdapters(DefaultPicoContainer.java:1009)
at org.picocontainer.DefaultPicoContainer.start(DefaultPicoContainer.java:767)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:134)
at org.sonar.server.platform.platformlevel.PlatformLevel.start(PlatformLevel.java:90)
at org.sonar.server.platform.platformlevel.PlatformLevelStartup.access$001(PlatformLevelStartup.java:45)
at org.sonar.server.platform.platformlevel.PlatformLevelStartup$1.doPrivileged(PlatformLevelStartup.java:83)
at org.sonar.server.user.DoPrivileged.execute(DoPrivileged.java:45)
at org.sonar.server.platform.platformlevel.PlatformLevelStartup.start(PlatformLevelStartup.java:80)
at org.sonar.server.platform.Platform.executeStartupTasks(Platform.java:196)
at org.sonar.server.platform.Platform.access$400(Platform.java:46)
at org.sonar.server.platform.Platform$1.lambda$doRun$1(Platform.java:121)
at org.sonar.server.platform.Platform$AutoStarterRunnable.runIfNotAborted(Platform.java:371)
at org.sonar.server.platform.Platform$1.doRun(Platform.java:121)
at org.sonar.server.platform.Platform$AutoStarterRunnable.run(Platform.java:355)
at java.lang.Thread.run(Thread.java:745)
2017.11.21 05:22:43 INFO web[][o.s.p.StopWatcher] Stopping process
Is there a way to fix this problem?
I have not heavily edited the quality profile, so I'm comfortable with reverting that back to defaults.

As mentioned in the comments, it might be a problem of an outdated plugin. Here is what I did to solve the issue:
Remove the sonar-java plugin file from the extensions/plugins/ folder. (Also remove any plugins depending on java, if you see error messages for this in ce.log .)
If you are behind a proxy set up proxy settings for Marketplace in conf/sonar.properties . Note, that Marketplace does not claims for connection errors (at least in current version) just does not shows up available plugins. (But does log connection errors to web.log .)
Stop, and start SonarQube.
Login as Admin, and install the latest version of SonarJava plugin from Marketplace.

Related

Cant initialize spring-boot Database

When I download the database navigator and try to enable it, it is required that I restart IntelliJ IDEA, but when I restart IntelliJ IDEA, it shows me this problem.
Plugin 'DBN' failed to initialize and will be disabled. Please
restart IntelliJ IDEA.
com.intellij.openapi.extensions.impl.PicoPluginExtensionInitializationException: Duplicate registration for EP: com.intellij.methodImplementor: original plugin com.intellij, new plugin DBN
at com.intellij.openapi.extensions.impl.ExtensionsAreaImpl.checkThatPointNotDuplicated(ExtensionsAreaImpl.java:284)
at com.intellij.openapi.extensions.impl.ExtensionsAreaImpl.registerExtensionPoint(ExtensionsAreaImpl.java:289)
at com.intellij.openapi.extensions.impl.ExtensionsAreaImpl.registerExtensionPoint(ExtensionsAreaImpl.java:128)
at com.intellij.ide.plugins.IdeaPluginDescriptorImpl.registerExtensionPoints(IdeaPluginDescriptorImpl.java:392)
at com.intellij.ide.plugins.PluginManagerCore.registerExtensionPointsAndExtensions(PluginManagerCore.java:1548)
at com.intellij.ide.plugins.PluginManagerCore.initializePlugins(PluginManagerCore.java:1453)
at com.intellij.ide.plugins.PluginManagerCore.initPlugins(PluginManagerCore.java:1586)
at com.intellij.ide.plugins.PluginManagerCore.getLoadedPlugins(PluginManagerCore.java:139)
at com.intellij.openapi.components.impl.ComponentManagerImpl.getComponentConfigs(ComponentManagerImpl.java:291)
at com.intellij.openapi.components.impl.ComponentManagerImpl.init(ComponentManagerImpl.java:79)
at com.intellij.openapi.application.impl.ApplicationImpl.load(ApplicationImpl.java:407)
at com.intellij.openapi.application.impl.ApplicationImpl.load(ApplicationImpl.java:393)
at com.intellij.idea.IdeaApplication.run(IdeaApplication.java:208)
at com.intellij.idea.IdeaApplication.lambda$initApplication$0(IdeaApplication.java:74)
at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:311)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:764)
at java.awt.EventQueue.access$500(EventQueue.java:98)
at java.awt.EventQueue$3.run(EventQueue.java:715)
at java.awt.EventQueue$3.run(EventQueue.java:709)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:734)
at com.intellij.ide.IdeEventQueue.dispatchEvent(IdeEventQueue.java:347)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
Maybe plugin version isn't compatible with the Intellij version, try to remove plugin manually from a plugins directory and later check those versions on provider site.
https://intellij-support.jetbrains.com/hc/en-us/articles/206544519

Unable to run Sonar with Hybris

I am new to SonarQube and trying to run the analytics on all the extensions in one go. I am able to run it successfully for extensions individually but when I run "ant sonar" with hybris, it gives me below exception:
[echo] - sonar.jdbc.url : ${sonar.jdbc.url}
[echo] - sonar.projectName : Superproject
[echo] - sonar.project.key : superprojectkey
[echo] - sonar.project.version : 1.0
[echo] - sonar.excludedExtensions :
[echo] - sonar.language : java
[echo] *************************************************
[echo]
r:sonar] Apache Ant(TM) version 1.9.1 compiled on May 15 2013
r:sonar] Sonar Ant Task version: 2.1
r:sonar] Loaded from: file:/E:/hybris/bin/platform/resources/ant
r:sonar] INFO: Default locale: "en_IN", source code encoding: "UTF-8"
r:sonar] INFO: Work directory: E:\hybris\bin\platform\.sonar
r:sonar] ERROR: Sonar server 'http://localhost:9000' can not be reached
E:\\hybris\bin\platform\resources\ant\sonar.xml:84: org.sonar.runner.kevinsawicki.Ht
at org.sonar.runner.kevinsawicki.HttpRequest.code(HttpRequest.java:1392)
at org.sonar.runner.kevinsawicki.HttpRequest.ok(HttpRequest.java:1417)
at org.sonar.runner.impl.ServerConnection.downloadString(ServerConnection.java:83)
at org.sonar.runner.impl.ServerVersion.downloadVersion(ServerVersion.java:49)
at org.sonar.runner.impl.ServerVersion.version(ServerVersion.java:40)
at org.sonar.runner.impl.ServerVersion.is35Compatible(ServerVersion.java:64)
at org.sonar.runner.impl.JarDownloader.download(JarDownloader.java:39)
at org.sonar.runner.impl.BatchLauncher$1.run(BatchLauncher.java:59)
at java.security.AccessController.doPrivileged(Native Method)
at org.sonar.runner.impl.BatchLauncher.doExecute(BatchLauncher.java:57)
at org.sonar.runner.impl.BatchLauncher.execute(BatchLauncher.java:50)
at org.sonar.runner.api.EmbeddedRunner.doExecute(EmbeddedRunner.java:71)
at org.sonar.runner.api.Runner.execute(Runner.java:89)
at org.sonar.ant.SonarTask.launchAnalysis(SonarTask.java:53)
at org.sonar.ant.SonarTask.execute(SonarTask.java:48)
at org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:292)
at sun.reflect.GeneratedMethodAccessor4.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tools.ant.dispatch.DispatchUtils.execute(DispatchUtils.java:106)
at org.apache.tools.ant.Task.perform(Task.java:348)
at org.apache.tools.ant.taskdefs.Sequential.execute(Sequential.java:68)
at org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:292)
at sun.reflect.GeneratedMethodAccessor4.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tools.ant.dispatch.DispatchUtils.execute(DispatchUtils.java:106)
at org.apache.tools.ant.Task.perform(Task.java:348)
at org.apache.tools.ant.taskdefs.MacroInstance.execute(MacroInstance.java:396)
at org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:292)
at sun.reflect.GeneratedMethodAccessor4.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tools.ant.dispatch.DispatchUtils.execute(DispatchUtils.java:106)
at org.apache.tools.ant.Task.perform(Task.java:348)
at org.apache.tools.ant.Target.execute(Target.java:435)
at org.apache.tools.ant.Target.performTasks(Target.java:456)
at org.apache.tools.ant.Project.executeSortedTargets(Project.java:1393)
at org.apache.tools.ant.Project.executeTarget(Project.java:1364)
at org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:41)
at org.apache.tools.ant.Project.executeTargets(Project.java:1248)
at org.apache.tools.ant.Main.runBuild(Main.java:851)
at org.apache.tools.ant.Main.startAnt(Main.java:235)
at org.apache.tools.ant.launch.Launcher.run(Launcher.java:280)
at org.apache.tools.ant.launch.Launcher.main(Launcher.java:109)
Caused by: java.net.ConnectException: Connection refused: connect
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at sun.net.www.protocol.http.HttpURLConnection$10.run(HttpURLConnection.java:1890)
at sun.net.www.protocol.http.HttpURLConnection$10.run(HttpURLConnection.java:1885)
at java.security.AccessController.doPrivileged(Native Method)
at sun.net.www.protocol.http.HttpURLConnection.getChainedException(HttpURLConnection.java:1884)
at sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1457)
at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1441)
at java.net.HttpURLConnection.getResponseCode(HttpURLConnection.java:480)
at org.sonar.runner.kevinsawicki.HttpRequest.code(HttpRequest.java:1390)
... 44 more
I know this is an configuration issue but I could not locate the file where the LOG is saying it is.
Also, why is it requiring jdbc url?
Thanks.
i just write down the approach we are using within our projects - not exactly as we are wrapping ant with gradle but how we proceed and configure everything.
We are not using the ant sonar scanner but either, the gradle sonar scanner [1] or the jenkins sonar scanner [2], so in this case you could actually use the sonar scanner [3].
Configuring sonar properties:
you can easily put all your configurations in your project root in a file called sonar-project.properties.
sonar.host.url=<sonar url>
sonar.projectKey=<project key>
sonar.projectName=<project name>
# you could use here java as language, but if you also want to analyse JS and other languages remove it, and adapt the source path to add those too
sonar.language=java
sonar.sources=<path-to-extension>/src,\
<path-to-extension>/hmc/src,\
<path-to-extension>/web/src,\
sonar.tests=<path-to-extension>/testsrc
sonar.java.binaries=**/classes
sonar.java.libraries=**/*.jar
sonar.java.test.binaries=**/classes
sonar.java.test.libraries=**/*.jar
this is just a simple basic configuration - so you need to define your test plugin and paths in here too.
i added paths for web and hmc, if your extension is not using them remove them
i just added one extensions, you could simply extend it with multiple ones
every config you do, you can simply put into this sonar-project.properties, and you can even check it into your VCS, to share it with others.
benefits are that this settings are connected with your source, so if you have a new extension you also adapt the sonar settings, and do not need to adapt any build etc.
Running the scanner
now you can simple use every runner you like by using those project properties. either jenkins, or gradle or local, you just need to ensure that the sonar-project.properties file is in the root of your project, and pointing to the right files.
Acknowledge
i know this is not the default hybris way, and it is not using the ant target of hybris, but i figured out, that this approach gives me much more flexibility than the default way!
[1] https://docs.sonarqube.org/display/SCAN/Analyzing+with+SonarQube+Scanner+for+Gradle?src=contextnavpagetreemode
[2] https://docs.sonarqube.org/display/SCAN/Analyzing+with+SonarQube+Scanner+for+Jenkins
[3] https://docs.sonarqube.org/display/SCAN/Analyzing+with+SonarQube+Scanner
are you sure that the Sonarqube server is launched? Maybe launch it manually and be sure that is is visible in your browser when accessing locallhost:9000/about .
As the root problem is the sonarserver not being available i'd go for that...
The Sonar Host URL is configured through a property called sonar.host.url
On the project I was working a while ago this property was set in hybris\config\local.properties
Related to the INFO: Work directory: E:\hybris\bin\platform.sonar logged,
I think that the working directory can be set using the sonar.working.directory which ,if not set, is somehow computed to be the one you saw in logs (i.e hybris\bin\platform.sonar)

SonarQube Nullpointer on analysis, missing fields or rules parameters

I'm running into a nullpointer exception when running analysis on a java project.
The condition that triggers the analysis failure only happens when I activate certain Rules in the Quality Profile. Particularly, any rule that has a parameter you can override, causes the nullpointer failure. It fails whether or not I provide an override value or if the parameter is left default.
I should note that I can get successful analysis to complete if those particular rules are deactivated in the quality profile. It only seems to be related to certain rules that have parameters.
I can replicate this Nullpointer failure with both the sonar-runner, and the org.sonarqube gradle plugin (v 1.0). So I suspect it is not a problem with the runner or the plugin but some kind of setup issue with the SonarQube server and/or database.
The problem is, I don't know how to go in and fix this issue. The SonarQube database isn't documented (that I'm aware) I suspect that there is something maybe missing in the database but I'm not even sure where they might be.
Any suggestions on where I might look?
Versions:
SonarQube 4.5.2
SonarQube Runner 2.4
Java 1.8.0_40 Oracle Corporation (64-bit)
Mac OS X 10.10.4 x86_64
Here is the stack trace of the error:
INFO: ------------------------------------------------------------------------
INFO: EXECUTION FAILURE
INFO: ------------------------------------------------------------------------
Total time: 1:43.316s
Final Memory: 27M/635M
INFO: ------------------------------------------------------------------------
ERROR: Error during Sonar runner execution
org.sonar.runner.impl.RunnerException: Unable to execute Sonar
at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:91)
at org.sonar.runner.impl.BatchLauncher$1.run(BatchLauncher.java:75)
at java.security.AccessController.doPrivileged(Native Method)
at org.sonar.runner.impl.BatchLauncher.doExecute(BatchLauncher.java:69)
at org.sonar.runner.impl.BatchLauncher.execute(BatchLauncher.java:50)
at org.sonar.runner.api.EmbeddedRunner.doExecute(EmbeddedRunner.java:102)
at org.sonar.runner.api.Runner.execute(Runner.java:100)
at org.sonar.runner.Main.executeTask(Main.java:70)
at org.sonar.runner.Main.execute(Main.java:59)
at org.sonar.runner.Main.main(Main.java:53)
Caused by: java.lang.NullPointerException
at org.sonar.api.batch.rule.Checks.getField(Checks.java:180)
at org.sonar.api.batch.rule.Checks.configureFields(Checks.java:167)
at org.sonar.api.batch.rule.Checks.instantiate(Checks.java:152)
at org.sonar.api.batch.rule.Checks.addAnnotatedChecks(Checks.java:127)
at org.sonar.java.SonarComponents.registerTestCheckClasses(SonarComponents.java:128)
at org.sonar.plugins.java.JavaSquidSensor.analyse(JavaSquidSensor.java:82)
at org.sonar.batch.phases.SensorsExecutor.executeSensor(SensorsExecutor.java:79)
at org.sonar.batch.phases.SensorsExecutor.execute(SensorsExecutor.java:70)
at org.sonar.batch.phases.PhaseExecutor.execute(PhaseExecutor.java:119)
at org.sonar.batch.scan.ModuleScanContainer.doAfterStart(ModuleScanContainer.java:194)
at org.sonar.api.platform.ComponentContainer.startComponents(ComponentContainer.java:93)
at org.sonar.api.platform.ComponentContainer.execute(ComponentContainer.java:78)
at org.sonar.batch.scan.ProjectScanContainer.scan(ProjectScanContainer.java:233)
at org.sonar.batch.scan.ProjectScanContainer.scanRecursively(ProjectScanContainer.java:228)
at org.sonar.batch.scan.ProjectScanContainer.doAfterStart(ProjectScanContainer.java:221)
at org.sonar.api.platform.ComponentContainer.startComponents(ComponentContainer.java:93)
at org.sonar.api.platform.ComponentContainer.execute(ComponentContainer.java:78)
at org.sonar.batch.scan.ScanTask.scan(ScanTask.java:64)
at org.sonar.batch.scan.ScanTask.execute(ScanTask.java:51)
at org.sonar.batch.bootstrap.TaskContainer.doAfterStart(TaskContainer.java:125)
at org.sonar.api.platform.ComponentContainer.startComponents(ComponentContainer.java:93)
at org.sonar.api.platform.ComponentContainer.execute(ComponentContainer.java:78)
at org.sonar.batch.bootstrap.BootstrapContainer.executeTask(BootstrapContainer.java:173)
at org.sonar.batch.bootstrapper.Batch.executeTask(Batch.java:95)
at org.sonar.batch.bootstrapper.Batch.execute(Batch.java:67)
at org.sonar.runner.batch.IsolatedLauncher.execute(IsolatedLauncher.java:48)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:87)
... 9 more
We solved the problem, and the problem was indeed the Java plugin on the SonarQube server. The solution was to downgrade the Java plugin though. Here are the versions we ended up using:
Checkstyle [checkstyle] 2.2 Analyze Java code with Checkstyle.
Clover [clover] 3.0 Get code coverage with Atlassian Clover.
Cobertura [cobertura] 1.6.3 Get code coverage with Cobertura.
Findbugs [findbugs] 3.1 Analyze Java code with Findbugs 3.0.0.
Java [java] 2.9.1 SonarQube rule engine.
JIRA [jira] 1.2 Connects SonarQube to Atlassian JIRA in various ways.
LDAP [ldap] 1.4 Delegates authentication to LDAP.
PMD [pmd] 2.3 Analyze Java code with PMD.

Sonar ant task fails with Provider org.apache.xerces.jaxp.SAXParserFactoryImpl not found exception

I am trying to run sonar ant task on Bamboo machine. The same task works fine on my local machine (ant version 1.9.3 as well as ant version 1.8.2) but fails on bamboo ant 1.8.2 with following error
org.sonar.runner.impl.RunnerException: Unable to execute Sonar
at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:91)
at org.sonar.runner.impl.BatchLauncher$1.run(BatchLauncher.java:75)
at java.security.AccessController.doPrivileged(Native Method)
at org.sonar.runner.impl.BatchLauncher.doExecute(BatchLauncher.java:69)
at org.sonar.runner.impl.BatchLauncher.execute(BatchLauncher.java:50)
at org.sonar.runner.api.EmbeddedRunner.doExecute(EmbeddedRunner.java:102)
at org.sonar.runner.api.Runner.execute(Runner.java:100)
at org.sonar.ant.SonarTask.launchAnalysis(SonarTask.java:53)
at org.sonar.ant.SonarTask.execute(SonarTask.java:48)
at org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:291)
at sun.reflect.GeneratedMethodAccessor4.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.apache.tools.ant.dispatch.DispatchUtils.execute(DispatchUtils.java:106)
at org.apache.tools.ant.Task.perform(Task.java:348)
at org.apache.tools.ant.Target.execute(Target.java:390)
at org.apache.tools.ant.Target.performTasks(Target.java:411)
at org.apache.tools.ant.Project.executeSortedTargets(Project.java:1399)
at org.apache.tools.ant.Project.executeTarget(Project.java:1368)
at org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:41)
at org.apache.tools.ant.Project.executeTargets(Project.java:1251)
at org.apache.tools.ant.Main.runBuild(Main.java:809)
at org.apache.tools.ant.Main.startAnt(Main.java:217)
at org.apache.tools.ant.launch.Launcher.run(Launcher.java:280)
at org.apache.tools.ant.launch.Launcher.main(Launcher.java:109)
error 15-Aug-2014 16:08:20 Caused by: javax.xml.parsers.FactoryConfigurationError: Provider org.apache.xerces.jaxp.SAXParserFactoryImpl not found
at javax.xml.parsers.SAXParserFactory.newInstance(SAXParserFactory.java:134)
at ch.qos.logback.core.joran.event.SaxEventRecorder.buildSaxParser(SaxEventRecorder.java:81)
at ch.qos.logback.core.joran.event.SaxEventRecorder.recordEvents(SaxEventRecorder.java:59)
at ch.qos.logback.core.joran.GenericConfigurator.doConfigure(GenericConfigurator.java:134)
at ch.qos.logback.core.joran.GenericConfigurator.doConfigure(GenericConfigurator.java:99)
at org.sonar.runner.batch.IsolatedLauncher.initLogging(IsolatedLauncher.java:71)
at org.sonar.runner.batch.IsolatedLauncher.createBatch(IsolatedLauncher.java:52)
at org.sonar.runner.batch.IsolatedLauncher.execute(IsolatedLauncher.java:48)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:87)
... 24 more
I have tried putting xercesImpl.jar in ant classpath
I had a similar issue running sonarqube 4.2 where findbugs would fail due to the missing parser. I was able to solve the issues by placing the xercesImpl.jar in the [sonar.home]/web/WEB-INF/lib folder and restarting the server. Once all other dependency issues were resolved by placing other needed jars in the same location, the issue disappeared.
Hope this helps.
I had exactly the same issue, also using Bamboo and the sonar Ant task.
I found that it was because I had run ant with an old java version. I switched from 1.6 to 1.7 and the issue was resolved.
Hope this helps someone in the future.

Sonar Eclipse plugin: Failed to download batch_bootstrap/db

I'm having issues with the Eclipse plugin of sonar. When executing it I'm getting the following exception in the Eclipse console:
Exception in thread "main" org.sonar.runner.impl.RunnerException: Unable to execute Sonar
at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:91)
at org.sonar.runner.impl.BatchLauncher$1.run(BatchLauncher.java:75)
at java.security.AccessController.doPrivileged(Native Method)
at org.sonar.runner.impl.BatchLauncher.doExecute(BatchLauncher.java:69)
at org.sonar.runner.impl.BatchLauncher.execute(BatchLauncher.java:50)
at org.sonar.runner.impl.BatchLauncherMain.execute(BatchLauncherMain.java:41)
at org.sonar.runner.impl.BatchLauncherMain.main(BatchLauncherMain.java:59)
Caused by: org.sonar.api.utils.HttpDownloader$HttpException: Fail to download [http://<server>/batch_bootstrap/db?project=<project>]. Response code: 500
at org.sonar.api.utils.HttpDownloader$BaseHttpDownloader$HttpInputSupplier.getInput(HttpDownloader.java:281)
at org.sonar.api.utils.HttpDownloader$BaseHttpDownloader$HttpInputSupplier.getInput(HttpDownloader.java:235)
at com.google.common.io.ByteStreams.copy(ByteStreams.java:116)
at com.google.common.io.Files.copy(Files.java:231)
at org.sonar.batch.bootstrap.ServerClient.download(ServerClient.java:69)
at org.sonar.batch.bootstrap.PreviewDatabase.downloadDatabase(PreviewDatabase.java:101)
at org.sonar.batch.bootstrap.PreviewDatabase.start(PreviewDatabase.java:69)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.invokeMethod(ReflectionLifecycleStrategy.java:110)
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.start(ReflectionLifecycleStrategy.java:89)
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.start(AbstractInjectionFactory.java:84)
at org.picocontainer.behaviors.AbstractBehavior.start(AbstractBehavior.java:169)
at org.picocontainer.behaviors.Stored$RealComponentLifecycle.start(Stored.java:132)
at org.picocontainer.behaviors.Stored.start(Stored.java:110)
at org.picocontainer.DefaultPicoContainer.potentiallyStartAdapter(DefaultPicoContainer.java:1015)
at org.picocontainer.DefaultPicoContainer.startAdapters(DefaultPicoContainer.java:1008)
at org.picocontainer.DefaultPicoContainer.start(DefaultPicoContainer.java:766)
at org.sonar.api.platform.ComponentContainer.startComponents(ComponentContainer.java:91)
at org.sonar.api.platform.ComponentContainer.execute(ComponentContainer.java:77)
at org.sonar.batch.bootstrapper.Batch.startBatch(Batch.java:92)
at org.sonar.batch.bootstrapper.Batch.execute(Batch.java:74)
at org.sonar.runner.batch.IsolatedLauncher.execute(IsolatedLauncher.java:45)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.sonar.runner.impl.BatchLauncher$1.delegateExecution(BatchLauncher.java:87)
... 6 more
We're running SonarQube Server 4.1.2, the plugin version is 3.3.0.
Any ideas?
Update
Could this be related to poor DB performance (even though it's not some timeout exception)? Sonar runs on an Oracle DB, and we just updated sonar which resolved issues with excessively long query times (but weirdly enough only for logged in users). I added login information in the plugin settings though, so i assumed it should work.
When opening a source file in Eclipse, I'm getting messages like
Retrieve issues of resource ResultUtil.java...
Done in 43625ms
which sounds like the query would be running way longer that desirable.
Update 2:
We realized that even though the project existed in SonarQube, and was analyzed, it was not provisioned (the project was created with a pre 4.0 version of SonarQube). To rule out that caused the issue we provisioned a new project in SonarQube, ran the analysis on that and configured the eclipse plugin to use this new project.
This did not resolve the issue, either we're getting the same exception, or no further message at all. Calling the URL in a web-browser yields the same result (i.e. endlessly says "waiting for <server>".
The "SonarQube Web Browser" view of the eclipse plugin correctly shows issues, which I take as a sign that the plugin is configured correctly. Also, for some reason querying the issues from SonarQube is now a lot faster, so I would rule out that this caused the issue.
Any more suggestions on what we could check?
Update 3
We tried restarting SonarQube and then tried to analyze the project using the eclipse plugin. This failed with the above exception. Checking the SonarQube logs revealed these issues:
2014.03.19 11:17:35 ERROR [o.s.c.p.DbTemplate] Fail to copy table rules
org.h2.jdbc.JdbcBatchUpdateException: Unique index or primary key violation: "RULES_PLUGIN_KEY_AND_NAME ON PUBLIC.RULES(PLUGIN_RULE_KEY, PLUGIN_NAME)"; SQL statement:
INSERT INTO rules(ID,PLUGIN_RULE_KEY,PLUGIN_NAME,DESCRIPTION,PRIORITY,CARDINALITY,PARENT_ID,PLUGIN_CONFIG_KEY,NAME,STATUS,LANGUAGE,CREATED_AT,UPDATED_AT) VALUES(?,?,?,?,?,?,?,?,?,?,?,?,?) [23505-172]
at org.h2.jdbc.JdbcPreparedStatement.executeBatch(JdbcPreparedStatement.java:1167) ~[h2-1.3.172.jar:1.3.172]
at org.apache.commons.dbcp.DelegatingStatement.executeBatch(DelegatingStatement.java:297) ~[commons-dbcp-1.4.jar:1.4]
at org.apache.commons.dbcp.DelegatingStatement.executeBatch(DelegatingStatement.java:297) ~[commons-dbcp-1.4.jar:1.4]
at org.sonar.core.persistence.DbTemplate.copyTableColumns(DbTemplate.java:100) [sonar-core-4.1.2.jar:na]
at org.sonar.core.persistence.DbTemplate.copyTableColumns(DbTemplate.java:54) [sonar-core-4.1.2.jar:na]
at org.sonar.core.persistence.DbTemplate.copyTable(DbTemplate.java:49) [sonar-core-4.1.2.jar:na]
at org.sonar.core.persistence.PreviewDatabaseFactory.copy(PreviewDatabaseFactory.java:87) [sonar-core-4.1.2.jar:na]
at org.sonar.core.persistence.PreviewDatabaseFactory.createNewDatabaseForDryRun(PreviewDatabaseFactory.java:63) [sonar-core-4.1.2.jar:na]
at org.sonar.core.preview.PreviewCache.generateNewDB(PreviewCache.java:121) [sonar-core-4.1.2.jar:na]
at org.sonar.core.preview.PreviewCache.getDatabaseForPreview(PreviewCache.java:81) [sonar-core-4.1.2.jar:na]
at org.sonar.server.ui.JRubyFacade.createDatabaseForPreview(JRubyFacade.java:471) [JRubyFacade.class:na]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.7.0_45]
(... snip ...)
followed by
2014.03.19 11:17:35 ERROR [o.s.s.ui.JRubyFacade] Fail to render: http://hulk:9000/batch_bootstrap/db?project=E2PR-12.0
attempt to unlock read lock, not locked by current thread
java.util.concurrent.locks.ReentrantReadWriteLock$Sync.unmatchedUnlockException(ReentrantReadWriteLock.java:447)
java.util.concurrent.locks.ReentrantReadWriteLock$Sync.tryReleaseShared(ReentrantReadWriteLock.java:431)
java.util.concurrent.locks.AbstractQueuedSynchronizer.releaseShared(AbstractQueuedSynchronizer.java:1340)
java.util.concurrent.locks.ReentrantReadWriteLock$ReadLock.unlock(ReentrantReadWriteLock.java:883)
org.sonar.core.preview.PreviewCache.getDatabaseForPreview(PreviewCache.java:92)
org.sonar.server.ui.JRubyFacade.createDatabaseForPreview(JRubyFacade.java:471)
sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
java.lang.reflect.Method.invoke(Method.java:606)
(... snip ...)
Subsequent analysis runs triggered by the eclipse plugin seem to hang at 11:28:46.317 DEBUG - Download: http://hulk:9000/batch_bootstrap/db?project=E2PR-12.0 (no proxy)
I can provide the logfile if that would help you to find out what's wrong.
It looks like your project has not been analyzed in SonarQube prior to running preview analyses in Eclipse. See http://docs.codehaus.org/display/SONAR/Configuring+SonarQube+in+Eclipse.
So, after a lot of digging I was able to resolve this issue. What pointed into the right direction was this discussion: http://comments.gmane.org/gmane.comp.java.sonar.general/33747
In the end this was caused by duplicate manual rules in the RULES table. I have no idea how they ended up there, but they were not visible from the UI, which made it kinda hard to spot.
After deleting these rules in the DB I'm now able to trigger the analysis from eclipse.

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