i have access to a cluster that has the following error when we try to start thrift server with this command:
dse -u my_usser -p my_password spark-sql-thriftserver start
After run that command, the folling message appears:
# starting org.apache.spark.sql.hive.thriftserver.HiveThriftServer2, logging to /root/spark-thrift-server/spark-root-org.apache.spark.sql.hive.thriftserver.HiveThriftServer2-1-node3.domain.com.out
When i show the output of that file, the error is:
WARN 2017-12-29 01:44:01,875 org.apache.spark.SparkContext: Use an existing SparkContext, some configuration may not take effect.
ERROR 2017-12-29 01:44:05,379 org.apache.spark.deploy.DseSparkSubmitBootstrapper: Failed to start or submit Spark application
java.lang.RuntimeException: com.datastax.bdp.fs.model.NoSuchFileException: File not found: /tmp/hive/
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:522) ~[hive-exec-1.2.1.spark2.jar:1.2.1.spark2]
at org.apache.spark.sql.hive.client.HiveClientImpl.(HiveClientImpl.scala:189) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) ~[na:1.8.0_151]
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) ~[na:1.8.0_151]
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) ~[na:1.8.0_151]
at java.lang.reflect.Constructor.newInstance(Constructor.java:423) ~[na:1.8.0_151]
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:258) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:359) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:263) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.HiveSharedState.metadataHive$lzycompute(HiveSharedState.scala:39) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.HiveSharedState.metadataHive(HiveSharedState.scala:38) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.HiveSessionState.metadataHive$lzycompute(HiveSessionState.scala:43) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.HiveSessionState.metadataHive(HiveSessionState.scala:43) ~[spark-hive_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.thriftserver.SparkSQLEnv$.init(SparkSQLEnv.scala:62) ~[spark-hive-thriftserver_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
at org.apache.spark.sql.hive.thriftserver.HiveThriftServer2$.main(HiveThriftServer2.scala:81) ~[spark-hive-thriftserver_2.11-2.0.2.6-de611f9.jar:2.0.2.6-de611f9]
I have create manually that directory but that is not working :(
Related
I am trying to set up Hadoop 2.7.2 on Ubuntu 16.04.
I have done the Hadoop single-node cluster; I'm now trying Hive with Derby for metadata.
I believe that I've supplied appropriate permissions on the localhost port in java.policy. I have Hadoop Services started.
However, when I try to run Hive $HIVE_HOME/bin/hive, it fails with following exception trace.
Any help is appreciated.
SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/usr/lib/hive/lib/hive-jdbc-2.0.0-standalone.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/usr/lib/hive/lib/log4j-slf4j-impl-2.4.1.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/usr/local/hadoop/share/hadoop/common/lib/slf4j-log4j12-1.7.10.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
SLF4J: Actual binding is of type [org.apache.logging.slf4j.Log4jLoggerFactory]
Logging initialized using configuration in jar:file:/usr/lib/hive/lib/hive-common-2.0.0.jar!/hive-log4j2.properties
Exception in thread "main" java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1550)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3080)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3108)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:521)
at org.apache.hadoop.hive.ql.session.SessionState.beginStart(SessionState.java:494)
at org.apache.hadoop.hive.cli.CliDriver.run(CliDriver.java:709)
at org.apache.hadoop.hive.cli.CliDriver.main(CliDriver.java:645)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.hadoop.util.RunJar.run(RunJar.java:221)
at org.apache.hadoop.util.RunJar.main(RunJar.java:136)
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1548)
... 15 more
Caused by: javax.jdo.JDOFatalDataStoreException: Unable to open a test connection to the given database. JDBC url = jdbc:derby://localhost:1527/metastore_db;create=true, username = APP. Terminating connection pool (set lazyInit to true if you expect to start your database after your app). Original Exception: ------
java.sql.SQLNonTransientConnectionException: java.net.ConnectException : Error connecting to server localhost on port 1527 with message Connection refused.
at org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
at org.apache.derby.jdbc.ClientDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:208)
at com.jolbox.bonecp.BoneCP.obtainRawInternalConnection(BoneCP.java:361)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:416)
at com.jolbox.bonecp.BoneCPDataSource.getConnection(BoneCPDataSource.java:120)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:483)
at org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:296)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:606)
at org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:301)
at org.datanucleus.NucleusContextHelper.createStoreManagerForProperties(NucleusContextHelper.java:133)
at org.datanucleus.PersistenceNucleusContextImpl.initialise(PersistenceNucleusContextImpl.java:420)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:821)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:338)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:217)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at javax.jdo.JDOHelper$16.run(JDOHelper.java:1965)
at java.security.AccessController.doPrivileged(Native Method)
at javax.jdo.JDOHelper.invoke(JDOHelper.java:1960)
at javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1166)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:808)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:701)
at org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:397)
at org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:426)
at org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:320)
at org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:287)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:76)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:136)
at org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:55)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:64)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:516)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:481)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:547)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:370)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:78)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:84)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5749)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:219)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:67)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1548)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3080)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3108)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:521)
at org.apache.hadoop.hive.ql.session.SessionState.beginStart(SessionState.java:494)
at org.apache.hadoop.hive.cli.CliDriver.run(CliDriver.java:709)
at org.apache.hadoop.hive.cli.CliDriver.main(CliDriver.java:645)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.hadoop.util.RunJar.run(RunJar.java:221)
at org.apache.hadoop.util.RunJar.main(RunJar.java:136)
Caused by: org.apache.derby.client.am.DisconnectException: java.net.ConnectException : Error connecting to server localhost on port 1527 with message Connection refused.
at org.apache.derby.client.net.NetAgent.<init>(Unknown Source)
at org.apache.derby.client.net.NetConnection.newAgent_(Unknown Source)
at org.apache.derby.client.am.Connection.<init>(Unknown Source)
at org.apache.derby.client.net.NetConnection.<init>(Unknown Source)
at org.apache.derby.client.net.NetConnection40.<init>(Unknown Source)
at org.apache.derby.client.net.ClientJDBCObjectFactoryImpl40.newNetConnection(Unknown Source)
... 66 more
Caused by: java.net.ConnectException: Connection refused
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at java.net.Socket.connect(Socket.java:538)
at java.net.Socket.<init>(Socket.java:434)
at java.net.Socket.<init>(Socket.java:211)
at javax.net.DefaultSocketFactory.createSocket(SocketFactory.java:271)
at org.apache.derby.client.net.OpenSocketAction.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
... 72 more
------
NestedThrowables:
java.sql.SQLException: Unable to open a test connection to the given database. JDBC url = jdbc:derby://localhost:1527/metastore_db;create=true, username = APP. Terminating connection pool (set lazyInit to true if you expect to start your database after your app). Original Exception: ------
java.sql.SQLNonTransientConnectionException: java.net.ConnectException : Error connecting to server localhost on port 1527 with message Connection refused.
at org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
at org.apache.derby.jdbc.ClientDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:208)
at com.jolbox.bonecp.BoneCP.obtainRawInternalConnection(BoneCP.java:361)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:416)
at com.jolbox.bonecp.BoneCPDataSource.getConnection(BoneCPDataSource.java:120)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:483)
at org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:296)
Caused by: java.net.ConnectException: Connection refused
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at java.net.Socket.connect(Socket.java:538)
at java.net.Socket.<init>(Socket.java:434)
at java.net.Socket.<init>(Socket.java:211)
at javax.net.DefaultSocketFactory.createSocket(SocketFactory.java:271)
at org.apache.derby.client.net.OpenSocketAction.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
... 72 more
Your ubuntu server is refusing connections on port 1527. Either the derby server isn't running or you have a firewall rule blocking the connections. Run a lsof -i TCP:1527 to see if a process is running on the port. You can also try telneting to the port with telnet localhost 1527.
If you see a process on the port then the connection is probably blocked by a firewall rule or you have a stale process holding open the port. You can kill the PID and try restarting hive.
Start by debugging why the Derby server isn't starting by looking at the derby / hive server logs. These type of conditions are usually caused by permission issues on linux file paths or logs etc.
You may want to do some research on using mysql for your hive metadata if you plan on using this for more than a sandbox environment.
I have configured my Hive Over Hadoop and Hbase using tutorialspoint
http://www.tutorialspoint.com/hive/hive_installation.htm
Facing this issue with HIVE. Please Help
Logging initialized using configuration in jar:file:/usr/local/hive/apache-hive-1.2.1-bin/lib/hive-common-1.2.1.jar!/hive-log4j.properties. Exception in thread "main" java.lang.RuntimeException: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:522)
at org.apache.hadoop.hive.cli.CliDriver.run(CliDriver.java:677)
at org.apache.hadoop.hive.cli.CliDriver.main(CliDriver.java:621)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.util.RunJar.run(RunJar.java:221)
at org.apache.hadoop.util.RunJar.main(RunJar.java:136)Caused by: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1523)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)Caused by: javax.jdo.JDOFatalDataStoreException: Unable to open a test connection to the given database. JDBC url = jdbc:derby://localhost:1527/metastore_db;create=true, username = APP. Terminating connection pool (set lazyInit to true if you expect to start your database after your app). Original Exception: ------
java.sql.SQLNonTransientConnectionException: java.net.ConnectException : Error connecting to server localhost on port 1527 with message Connection refused.
at org.apache.derby.client.am.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.client.am.SqlException.getSQLException(Unknown Source)
at org.apache.derby.jdbc.ClientDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:571)
at java.sql.DriverManager.getConnection(DriverManager.java:187)
at com.jolbox.bonecp.BoneCP.obtainRawInternalConnection(BoneCP.java:361)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:416)
at com.jolbox.bonecp.BoneCPDataSource.getConnection(BoneCPDataSource.java:120)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:501)
at org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:298)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
It looks like you haven't started Derby database. Take a look at this Hive doc: https://cwiki.apache.org/confluence/display/Hive/HiveDerbyServerMode. There is a short paragraph on how to start Derby.
Derby Server doesn't run.So it hive throws connection refused exception.
GOto %DERBY_HOME%\bin and StartNetworkServer.cmd file
Now restart hive services.
Hope this really helpful for you
Background :
I have a kubernetes cluster which has a spark cluster (with driver outside the cluster) and hadoop pod. I mounted the folder path of hadoop pod to one of the external disk.
Issue :
I'm getting below exception when spark cluster tries to create a checkpointing folder in hdfs.
java.io.EOFException: End of File Exception between local host is: "jfgubq745vn2ym-tg1isslukll1u3/10.92.0.135"; destination host is: "dev-dev-hadoop":9000; : java.io.EOFException; For more details see: http://wiki.apache.org/hadoop/EOFException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.hadoop.net.NetUtils.wrapWithMessage(NetUtils.java:791)
at org.apache.hadoop.net.NetUtils.wrapException(NetUtils.java:764)
at org.apache.hadoop.ipc.Client.call(Client.java:1472)
at org.apache.hadoop.ipc.Client.call(Client.java:1399)
at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:232)
at com.sun.proxy.$Proxy28.mkdirs(Unknown Source)
at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.mkdirs(ClientNamenodeProtocolTranslatorPB.java:539)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:187)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:102)
at com.sun.proxy.$Proxy29.mkdirs(Unknown Source)
at org.apache.hadoop.hdfs.DFSClient.primitiveMkdir(DFSClient.java:2753)
at org.apache.hadoop.hdfs.DFSClient.mkdirs(DFSClient.java:2724)
at org.apache.hadoop.hdfs.DistributedFileSystem$17.doCall(DistributedFileSystem.java:870)
at org.apache.hadoop.hdfs.DistributedFileSystem$17.doCall(DistributedFileSystem.java:866)
at org.apache.hadoop.fs.FileSystemLinkResolver.resolve(FileSystemLinkResolver.java:81)
at org.apache.hadoop.hdfs.DistributedFileSystem.mkdirsInternal(DistributedFileSystem.java:866)
at org.apache.hadoop.hdfs.DistributedFileSystem.mkdirs(DistributedFileSystem.java:859)
at org.apache.hadoop.fs.FileSystem.mkdirs(FileSystem.java:1817)
at org.apache.spark.streaming.StreamingContext.checkpoint(StreamingContext.scala:233)
...
at scala.util.Try$.apply(Try.scala:161)
at falkonry.tercel.process.Main$.main(Main.scala:54)
at falkonry.tercel.process.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$runMain(SparkSubmit.scala:664)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:169)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:192)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:111)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.io.EOFException
at java.io.DataInputStream.readInt(DataInputStream.java:392)
at org.apache.hadoop.ipc.Client$Connection.receiveRpcResponse(Client.java:1071)
at org.apache.hadoop.ipc.Client$Connection.run(Client.java:966)
This works well if I do not mount a path to external disk.
This issue is resolved. The docker image I was using for hadoop container does not format external mounted disks on startup. I edited the dockerfile and made it to format the external mounted paths. Updated dockerfile https://github.com/Falkonry/docker-hadoop/blob/master/Dockerfile
We are using bdutil 1.1 to deploy a Spark (1.2.0) cluster. However, we are having an issue when we launch our spark script:
py4j.protocol.Py4JJavaError: An error occurred while calling o70.registerTempTable.
: java.lang.RuntimeException: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.metastore.HiveMetaStoreClient
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:346)
at org.apache.spark.sql.hive.HiveContext$$anonfun$4.apply(HiveContext.scala:235)
at org.apache.spark.sql.hive.HiveContext$$anonfun$4.apply(HiveContext.scala:231)
at scala.Option.orElse(Option.scala:257)
at org.apache.spark.sql.hive.HiveContext.x$3$lzycompute(HiveContext.scala:231)
at org.apache.spark.sql.hive.HiveContext.x$3(HiveContext.scala:229)
at org.apache.spark.sql.hive.HiveContext.hiveconf$lzycompute(HiveContext.scala:229)
at org.apache.spark.sql.hive.HiveContext.hiveconf(HiveContext.scala:229)
at org.apache.spark.sql.hive.HiveMetastoreCatalog.<init>(HiveMetastoreCatalog.scala:54)
at org.apache.spark.sql.hive.HiveContext$$anon$1.<init>(HiveContext.scala:253)
at org.apache.spark.sql.hive.HiveContext.catalog$lzycompute(HiveContext.scala:253)
at org.apache.spark.sql.hive.HiveContext.catalog(HiveContext.scala:253)
at org.apache.spark.sql.hive.HiveContext.catalog(HiveContext.scala:72)
at org.apache.spark.sql.SQLContext.registerRDDAsTable(SQLContext.scala:279)
at org.apache.spark.sql.SchemaRDDLike$class.registerTempTable(SchemaRDDLike.scala:86)
at org.apache.spark.sql.api.java.JavaSchemaRDD.registerTempTable(JavaSchemaRDD.scala:42)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:231)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:379)
at py4j.Gateway.invoke(Gateway.java:259)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:133)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:207)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.metastore.HiveMetaStoreClient
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1412)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:62)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:72)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:2453)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:2465)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:340)
... 26 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1410)
... 31 more
Caused by: javax.jdo.JDOFatalUserException: Class org.datanucleus.api.jdo.JDOPersistenceManagerFactory was not found.
The script works on my laptop. I have datanucleus-api-jdo-3.2.6.jar in the /home/hadoop/spark-install/lib path.
Any ideas of what could be wrong?
I needed to add :
SPARK_CLASSPATH=/home/hadoop/spark-install/lib/datanucleus-api-jdo-3.2.6.jar:/home/hadoop/spark-install/lib/datanucleus-core-3.2.10.jar:/home/hadoop/spark-install/lib/datanucleus-rdbms-3.2.9.jar
before my spark-submit command:
SPARK_CLASSPATH=/home/hadoop/spark-install/lib/datanucleus-api-jdo-3.2.6.jar:/home/hadoop/spark-install/lib/datanucleus-core-3.2.10.jar:/home/hadoop/spark-install/lib/datanucleus-rdbms-3.2.9.jar ../hadoop/spark-install/bin/spark-submit main.py --master spark://spark-m:7077
I get this error when I try to run hadoop jar to remote node, I have one master node and few slaves node in multi-cluster. I have two problems
When I run start-all.sh it ask me for password even though I create ssh auth and I can ssh to remote and localhost without password. For example if if run start-all.ssh, I get user#mycomputername: password, but when I keep hit enter, all the daemons will run after all.
is the below error.
15/01/20 08:53:01 ERROR security.UserGroupInformation: PriviledgedActionException as:utra cause:java.net.ConnectException: Call to user/------:9000 failed on connection exception: java.net.ConnectException: Connection refused
Exception in thread "main" java.net.ConnectException: Call to user/------:9000 failed on connection exception: java.net.ConnectException: Connection refused
at org.apache.hadoop.ipc.Client.wrapException(Client.java:1142)
at org.apache.hadoop.ipc.Client.call(Client.java:111`enter code here`8)
at org.apache.hadoop.ipc.RPC$Invoker.invoke(RPC.java:229)
at com.sun.proxy.$Proxy1.getProtocolVersion(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:85)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:62)
at com.sun.proxy.$Proxy1.getProtocolVersion(Unknown Source)
at org.apache.hadoop.ipc.RPC.checkVersion(RPC.java:422)
at org.apache.hadoop.hdfs.DFSClient.createNamenode(DFSClient.java:183)
at org.apache.hadoop.hdfs.DFSClient.<init>(DFSClient.java:281)
at org.apache.hadoop.hdfs.DFSClient.<init>(DFSClient.java:245)
at org.apache.hadoop.hdfs.DistributedFileSystem.initialize(DistributedFileSystem.java:100)
at org.apache.hadoop.fs.FileSystem.createFileSystem(FileSystem.java:1446)
at org.apache.hadoop.fs.FileSystem.access$200(FileSystem.java:67)
at org.apache.hadoop.fs.FileSystem$Cache.get(FileSystem.java:1464)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:263)
at org.apache.hadoop.fs.Path.getFileSystem(Path.java:187)
at org.apache.hadoop.mapred.FileOutputFormat.checkOutputSpecs(FileOutputFormat.java:110)
at org.apache.hadoop.mapred.JobClient$2.run(JobClient.java:975)
at org.apache.hadoop.mapred.JobClient$2.run(JobClient.java:936)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:415)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1190)
at org.apache.hadoop.mapred.JobClient.submitJobInternal(JobClient.java:936)
at org.apache.hadoop.mapred.JobClient.submitJob(JobClient.java:910)
at org.apache.hadoop.mapred.JobClient.runJob(JobClient.java:1353)
at WordCount.main(WordCount.java:62)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.util.RunJar.main(RunJar.java:160)
Caused by: java.net.ConnectException: Connection refused
at sun.nio.ch.SocketChannelImpl.checkConnect(Native Method)
at sun.nio.ch.SocketChannelImpl.finishConnect(SocketChannelImpl.java:739)
at org.apache.hadoop.net.SocketIOWithTimeout.connect(SocketIOWithTimeout.java:206)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:511)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:481)
at org.apache.hadoop.ipc.Client$Connection.setupConnection(Client.java:457)
at org.apache.hadoop.ipc.Client$Connection.setupIOstreams(Client.java:583)
at org.apache.hadoop.ipc.Client$Connection.access$2200(Client.java:205)
at org.apache.hadoop.ipc.Client.getConnection(Client.java:1249)
at org.apache.hadoop.ipc.Client.call(Client.java:1093)
... 34 more
use this command as root:
chown -R hadoop:root /usr/local/hadoop