My sonarqube 5.6.1 server failed to start after a system reboot. It is possible that there were plugin updates that were pending a sonarqube server restart. Any advice on what to do?
The stack trace is:
2018.01.09 13:02:19 INFO web[o.s.s.p.ServerPluginRepository] Deploy plugin SonarXML / 1.4.3.1027 / 39588245cecf538bb27be4e496ff303b0143d20b
2018.01.09 13:02:19 INFO web[o.s.s.p.ServerPluginRepository] Deploy plugin Web / 2.5.0.476 / 636872f5d37fa7a440fe07d08d504e1a881225e5
2018.01.09 13:02:21 INFO web[o.s.s.p.RailsAppsDeployer] Deploying Ruby on Rails applications
2018.01.09 13:02:21 ERROR web[o.a.c.c.C.[.[.[/]] Exception sending context initialized event to listener instance of class org.sonar.server.platform.PlatformServletContextListener
org.apache.ibatis.executor.BatchExecutorException: org.sonar.db.property.PropertiesMapper.insert (batch index #2) failed. 1 prior sub executor(s) completed successfully, but will be rolled back. Cause: java.sql.BatchUpdateException: Batch entry 0 INSERT INTO properties (prop_key, resource_id, user_id, text_value)
VALUES ('sonar.core.id', NULL, NULL, '20180109130149') was aborted. Call getNextException to see the cause.
at org.apache.ibatis.executor.BatchExecutor.doFlushStatements(BatchExecutor.java:127) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.executor.BaseExecutor.flushStatements(BaseExecutor.java:114) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.executor.BaseExecutor.flushStatements(BaseExecutor.java:109) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.executor.BaseExecutor.commit(BaseExecutor.java:201) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.executor.CachingExecutor.commit(CachingExecutor.java:104) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.session.defaults.DefaultSqlSession.commit(DefaultSqlSession.java:174) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.session.defaults.DefaultSqlSession.commit(DefaultSqlSession.java:169) ~[mybatis-3.2.7.jar:3.2.7]
at org.sonar.db.DbSession.commit(DbSession.java:41) ~[sonar-db-5.6.1.jar:na]
at org.sonar.db.BatchSession.commit(BatchSession.java:168) ~[sonar-db-5.6.1.jar:na]
at org.sonar.db.property.PropertiesDao.insertGlobalProperties(PropertiesDao.java:268) ~[sonar-db-5.6.1.jar:na]
at org.sonar.server.platform.PersistentSettings.saveProperties(PersistentSettings.java:92) ~[sonar-server-5.6.1.jar:na]
at org.sonar.server.startup.ServerMetadataPersister.start(ServerMetadataPersister.java:44) ~[sonar-server-5.6.1.jar:na]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_151]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_151]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_151]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_151]
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.invokeMethod(ReflectionLifecycleStrategy.java:110) ~[picocontainer-2.15.jar:na]
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.start(ReflectionLifecycleStrategy.java:89) ~[picocontainer-2.15.jar:na]
at org.sonar.core.platform.ComponentContainer$1.start(ComponentContainer.java:320) ~[sonar-core-5.6.1.jar:na]
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.start(AbstractInjectionFactory.java:84) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.AbstractBehavior.start(AbstractBehavior.java:169) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.Stored$RealComponentLifecycle.start(Stored.java:132) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.Stored.start(Stored.java:110) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.potentiallyStartAdapter(DefaultPicoContainer.java:1016) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.startAdapters(DefaultPicoContainer.java:1009) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.start(DefaultPicoContainer.java:767) ~[picocontainer-2.15.jar:na]
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:141) ~[sonar-core-5.6.1.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevel.start(PlatformLevel.java:84) ~[sonar-server-5.6.1.jar:na]
at org.sonar.server.platform.Platform.start(Platform.java:216) ~[sonar-server-5.6.1.jar:na]
at org.sonar.server.platform.Platform.startLevel34Containers(Platform.java:189) ~[sonar-server-5.6.1.jar:na]
at org.sonar.server.platform.Platform.doStart(Platform.java:113) ~[sonar-server-5.6.1.jar:na]
at org.sonar.server.platform.Platform.doStart(Platform.java:99) ~[sonar-server-5.6.1.jar:na]
at org.sonar.server.platform.PlatformServletContextListener.contextInitialized(PlatformServletContextListener.java:44) ~[sonar-server-5.6.1.jar:na]
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4812) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5255) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:147) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1408) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1398) [tomcat-embed-core-8.0.32.jar:8.0.32]
at java.util.concurrent.FutureTask.run(FutureTask.java:266) [na:1.8.0_151]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) [na:1.8.0_151]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) [na:1.8.0_151]
at java.lang.Thread.run(Thread.java:748) [na:1.8.0_151]
Caused by: java.sql.BatchUpdateException: Batch entry 0 INSERT INTO properties (prop_key, resource_id, user_id, text_value)
VALUES ('sonar.core.id', NULL, NULL, '20180109130149') was aborted. Call getNextException to see the cause.
at org.postgresql.jdbc2.AbstractJdbc2Statement$BatchResultHandler.handleError(AbstractJdbc2Statement.java:2743) ~[postgresql-9.3-1102-jdbc41.jar:na]
at org.postgresql.core.v3.QueryExecutorImpl.processResults(QueryExecutorImpl.java:1928) ~[postgresql-9.3-1102-jdbc41.jar:na]
at org.postgresql.core.v3.QueryExecutorImpl.execute(QueryExecutorImpl.java:405) ~[postgresql-9.3-1102-jdbc41.jar:na]
at org.postgresql.jdbc2.AbstractJdbc2Statement.executeBatch(AbstractJdbc2Statement.java:2892) ~[postgresql-9.3-1102-jdbc41.jar:na]
at org.apache.commons.dbcp.DelegatingStatement.executeBatch(DelegatingStatement.java:297) ~[commons-dbcp-1.4.jar:1.4]
at org.apache.commons.dbcp.DelegatingStatement.executeBatch(DelegatingStatement.java:297) ~[commons-dbcp-1.4.jar:1.4]
at org.apache.ibatis.executor.BatchExecutor.doFlushStatements(BatchExecutor.java:103) ~[mybatis-3.2.7.jar:3.2.7]
... 41 common frames omitted
I ended up fixed my startup issue by deleting all plugins and restoring the original plugins from backup. Moral of the story is to make sure to have a backup of your plugins before updating.
Related
I am getting this error when I run npm run sonar for analyzing my nodejs code.
ERROR: Failed to get response while analyzing file:///newvolume/MTP/staging/mt_cloudplatform/backend/src/app/controllers/mockTestBookmarkController.js
java.io.InterruptedIOException: timeout
at okhttp3.RealCall.timeoutExit(RealCall.java:108)
at okhttp3.RealCall.execute(RealCall.java:97)
at org.sonar.plugins.javascript.eslint.EslintBridgeServerImpl.call(EslintBridgeServerImpl.java:159)
at org.sonar.plugins.javascript.eslint.EslintBasedRulesSensor.analyze(EslintBasedRulesSensor.java:124)
at org.sonar.plugins.javascript.eslint.EslintBasedRulesSensor.execute(EslintBasedRulesSensor.java:100)
at org.sonar.scanner.sensor.AbstractSensorWrapper.analyse(AbstractSensorWrapper.java:48)
at org.sonar.scanner.sensor.ModuleSensorsExecutor.execute(ModuleSensorsExecutor.java:85)
at org.sonar.scanner.sensor.ModuleSensorsExecutor.lambda$execute$1(ModuleSensorsExecutor.java:59)
at org.sonar.scanner.sensor.ModuleSensorsExecutor.withModuleStrategy(ModuleSensorsExecutor.java:77)
at org.sonar.scanner.sensor.ModuleSensorsExecutor.execute(ModuleSensorsExecutor.java:59)
at org.sonar.scanner.scan.ModuleScanContainer.doAfterStart(ModuleScanContainer.java:82)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:136)
at org.sonar.core.platform.ComponentContainer.execute(ComponentContainer.java:122)
at org.sonar.scanner.scan.ProjectScanContainer.scan(ProjectScanContainer.java:400)
at org.sonar.scanner.scan.ProjectScanContainer.scanRecursively(ProjectScanContainer.java:395)
at org.sonar.scanner.scan.ProjectScanContainer.doAfterStart(ProjectScanContainer.java:358)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:136)
at org.sonar.core.platform.ComponentContainer.execute(ComponentContainer.java:122)
at org.sonar.scanner.bootstrap.GlobalContainer.doAfterStart(GlobalContainer.java:141)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:136)
at org.sonar.core.platform.ComponentContainer.execute(ComponentContainer.java:122)
at org.sonar.batch.bootstrapper.Batch.doExecute(Batch.java:73)
at org.sonar.batch.bootstrapper.Batch.execute(Batch.java:67)
at org.sonarsource.scanner.api.internal.batch.BatchIsolatedLauncher.execute(BatchIsolatedLauncher.java:46)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.base/java.lang.reflect.Method.invoke(Unknown Source)
at org.sonarsource.scanner.api.internal.IsolatedLauncherProxy.invoke(IsolatedLauncherProxy.java:60)
at com.sun.proxy.$Proxy0.execute(Unknown Source)
at org.sonarsource.scanner.api.EmbeddedScanner.doExecute(EmbeddedScanner.java:185)
at org.sonarsource.scanner.api.EmbeddedScanner.execute(EmbeddedScanner.java:137)
at org.sonarsource.scanner.cli.Main.execute(Main.java:112)
at org.sonarsource.scanner.cli.Main.execute(Main.java:75)
at org.sonarsource.scanner.cli.Main.main(Main.java:61)
Caused by: java.net.SocketTimeoutException: Read timed out
at java.base/java.net.SocketInputStream.socketRead0(Native Method)
at java.base/java.net.SocketInputStream.socketRead(Unknown Source)
at java.base/java.net.SocketInputStream.read(Unknown Source)
at java.base/java.net.SocketInputStream.read(Unknown Source)
at okio.Okio$2.read(Okio.java:140)
at okio.AsyncTimeout$2.read(AsyncTimeout.java:237)
at okio.RealBufferedSource.indexOf(RealBufferedSource.java:358)
at okio.RealBufferedSource.readUtf8LineStrict(RealBufferedSource.java:230)
at okhttp3.internal.http1.Http1Codec.readHeaderLine(Http1Codec.java:226)
at okhttp3.internal.http1.Http1Codec.readResponseHeaders(Http1Codec.java:202)
at okhttp3.internal.http.CallServerInterceptor.intercept(CallServerInterceptor.java:101)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:147)
at okhttp3.internal.connection.ConnectInterceptor.intercept(ConnectInterceptor.java:45)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:147)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:121)
at okhttp3.internal.cache.CacheInterceptor.intercept(CacheInterceptor.java:94)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:147)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:121)
at okhttp3.internal.http.BridgeInterceptor.intercept(BridgeInterceptor.java:93)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:147)
at okhttp3.internal.http.RetryAndFollowUpInterceptor.intercept(RetryAndFollowUpInterceptor.java:125)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:147)
at okhttp3.internal.http.RealInterceptorChain.proceed(RealInterceptorChain.java:121)
at okhttp3.RealCall.getResponseWithInterceptorChain(RealCall.java:264)
at okhttp3.RealCall.execute(RealCall.java:93)
... 33 common frames omitted
It was working fine earlier but now I am getting this error. What could be the issue?
I used this tutorial for setting up sonarqube,
https://arjunphp.com/how-to-integrate-sonar-for-a-node-js-project/
I found that increasing available memory for Scanner may help, on GitHub issue page. It was sufficient in my case. Add this line with extended memory limit to your sonar-scanner.properties file
sonar.javascript.node.maxspace=4096
As typescripts dependencies are blamed as part of the reason for the timeout you may try uninstall some dependencies before scanning.
Link to original issue
Now when I use SonarQube 6.7.1, the following exception occurs, but before everything is perfect
SonarQube Scanne:3.0.3.778
SonarQube:6.7.1
MySQL:5.7
java.lang.IllegalStateException: load called twice for thread 'Worker 0 (UUID=AWEm-qWI05DFyrKNBSuu) on ce-worker-0' or state wasn't cleared last time it was used
at com.google.common.base.Preconditions.checkState(Preconditions.java:197)
at org.sonar.server.setting.ThreadLocalSettings.load(ThreadLocalSettings.java:153)
at org.sonar.ce.settings.SettingsLoader.start(SettingsLoader.java:43)
at sun.reflect.GeneratedMethodAccessor460.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.invokeMethod(ReflectionLifecycleStrategy.java:110)
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.start(ReflectionLifecycleStrategy.java:89)
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.start(AbstractInjectionFactory.java:84)
at org.picocontainer.behaviors.AbstractBehavior.start(AbstractBehavior.java:169)
at org.picocontainer.behaviors.Stored$RealComponentLifecycle.start(Stored.java:132)
at org.picocontainer.behaviors.Stored.start(Stored.java:110)
at org.picocontainer.DefaultPicoContainer.potentiallyStartAdapter(DefaultPicoContainer.java:1016)
at org.picocontainer.DefaultPicoContainer.startAdapters(DefaultPicoContainer.java:1009)
at org.picocontainer.DefaultPicoContainer.start(DefaultPicoContainer.java:767)
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:134)
at org.sonar.server.computation.task.container.TaskContainerImpl.bootup(TaskContainerImpl.java:77)
at org.sonar.server.computation.task.projectanalysis.taskprocessor.ReportTaskProcessor.process(ReportTaskProcessor.java:71)
at org.sonar.ce.taskprocessor.CeWorkerImpl.executeTask(CeWorkerImpl.java:134)
at org.sonar.ce.taskprocessor.CeWorkerImpl.findAndProcessTask(CeWorkerImpl.java:97)
at org.sonar.ce.taskprocessor.CeWorkerImpl.withCustomizedThreadName(CeWorkerImpl.java:81)
at org.sonar.ce.taskprocessor.CeWorkerImpl.call(CeWorkerImpl.java:73)
at org.sonar.ce.taskprocessor.CeWorkerImpl.call(CeWorkerImpl.java:43)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748)
With SQ 5.6.7 and Sonar-cxx 0.9.8, SonarQube doesn't start after feeding RATS rules. Seems like the rules in invalid XML are stored in MySQL. How can the rules removed from MySQL?
2018.03.02 12:50:02 INFO web[o.s.s.r.RegisterRules] Register rules
2018.03.02 12:50:03 INFO web[o.s.s.n.NotificationService] Notification service stopped
2018.03.02 12:50:03 ERROR web[o.a.c.c.C.[.[.[/]] Exception sending context initialized event to listener instance of class org.sonar.server.platform.PlatformServletContextListener
java.lang.IllegalStateException: XML is not valid
at org.sonar.api.server.rule.RulesDefinitionXmlLoader.load(RulesDefinitionXmlLoader.java:233) ~[sonar-plugin-api-5.6.7.jar:na]
at org.sonar.cxx.sensors.utils.CxxAbstractRuleRepository.define(CxxAbstractRuleRepository.java:99) ~[na:na]
at org.sonar.server.rule.RuleDefinitionsLoader.load(RuleDefinitionsLoader.java:54) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.rule.RegisterRules.start(RegisterRules.java:97) ~[sonar-server-5.6.7.jar:na]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_151]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_151]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_151]
at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_151]
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.invokeMethod(ReflectionLifecycleStrategy.java:110) ~[picocontainer-2.15.jar:na]
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.start(ReflectionLifecycleStrategy.java:89) ~[picocontainer-2.15.jar:na]
at org.sonar.core.platform.ComponentContainer$1.start(ComponentContainer.java:320) ~[sonar-core-5.6.7.jar:na]
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.start(AbstractInjectionFactory.java:84) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.AbstractBehavior.start(AbstractBehavior.java:169) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.Stored$RealComponentLifecycle.start(Stored.java:132) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.Stored.start(Stored.java:110) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.potentiallyStartAdapter(DefaultPicoContainer.java:1016) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.startAdapters(DefaultPicoContainer.java:1009) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.start(DefaultPicoContainer.java:767) ~[picocontainer-2.15.jar:na]
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:141) ~[sonar-core-5.6.7.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevel.start(PlatformLevel.java:84) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevelStartup.access$001(PlatformLevelStartup.java:45) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevelStartup$1.doPrivileged(PlatformLevelStartup.java:80) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.user.DoPrivileged.execute(DoPrivileged.java:44) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevelStartup.start(PlatformLevelStartup.java:77) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.platform.Platform.executeStartupTasks(Platform.java:201) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.platform.Platform.doStart(Platform.java:114) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.platform.Platform.doStart(Platform.java:99) ~[sonar-server-5.6.7.jar:na]
at org.sonar.server.platform.PlatformServletContextListener.contextInitialized(PlatformServletContextListener.java:44) ~[sonar-server-5.6.7.jar:na]
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4812) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5255) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:147) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1408) [tomcat-embed-core-8.0.32.jar:8.0.32]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1398) [tomcat-embed-core-8.0.32.jar:8.0.32]
at java.util.concurrent.FutureTask.run(FutureTask.java:266) [na:1.8.0_151]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) [na:1.8.0_151]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) [na:1.8.0_151]
at java.lang.Thread.run(Thread.java:748) [na:1.8.0_151]
Caused by: com.ctc.wstx.exc.WstxParsingException: Undeclared general entity "randdesc"
at [row,col {unknown-source}]: [250,29]
at com.ctc.wstx.sr.StreamScanner.constructWfcException(StreamScanner.java:614) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at com.ctc.wstx.sr.StreamScanner.throwParseError(StreamScanner.java:487) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at com.ctc.wstx.sr.BasicStreamReader.handleUndeclaredEntity(BasicStreamReader.java:5470) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at com.ctc.wstx.sr.StreamScanner.expandUnresolvedEntity(StreamScanner.java:1742) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at com.ctc.wstx.sr.StreamScanner.expandEntity(StreamScanner.java:1626) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at com.ctc.wstx.sr.StreamScanner.fullyResolveEntity(StreamScanner.java:1564) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at com.ctc.wstx.sr.BasicStreamReader.nextFromTree(BasicStreamReader.java:2748) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at com.ctc.wstx.sr.BasicStreamReader.next(BasicStreamReader.java:1073) ~[woodstox-core-lgpl-4.4.0.jar:4.4.0]
at org.codehaus.staxmate.in.SMHierarchicCursor.skipToEndElement(SMHierarchicCursor.java:156) ~[staxmate-2.0.1.jar:na]
at org.codehaus.staxmate.in.SMHierarchicCursor.getNext(SMHierarchicCursor.java:103) ~[staxmate-2.0.1.jar:na]
at org.sonar.api.server.rule.RulesDefinitionXmlLoader.load(RulesDefinitionXmlLoader.java:227) ~[sonar-plugin-api-5.6.7.jar:na]
... 36 common frames omitted
2018.03.02 12:50:03 ERROR web[o.a.c.c.StandardContext] One or more listeners failed to start. Full details will be found in the appropriate container log file
2018.03.02 12:50:03 ERROR web[o.a.c.c.StandardContext] Context [] startup failed due to previous errors
After all, I had to re-construct MySQL to make SQ run. The cause is that the RATS rules were given to 'sonar.cxx.rats.reportPath'. But it is clear that the cxx pulgin never checks it.
Please see my other question where I added data source information in JNDI of embedded tomcat.
Now I wish to suppress database metadata initialization sql scripts so I add property , spring.batch.initializer.enabled=false in application.properties, please see this.
When I add this property, I start getting below exception. If I remove this property, all works well.
Not sure what I am missing.
ERROR - 2016-09-05 09:44:46.358; org.springframework.batch.core.step.AbstractStep; Encountered an error executing step step1 in job RCMatcher
org.springframework.jndi.JndiLookupFailureException: JndiObjectTargetSource failed to obtain new target object; nested exception is javax.naming.NameNotFoundException: Name [java:comp/env/jdbc/RCMatcherDS] is not bound in this Context. Unable to find [java:comp].
at org.springframework.jndi.JndiObjectTargetSource.getTarget(JndiObjectTargetSource.java:142)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:192)
at com.sun.proxy.$Proxy37.getConnection(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:207)
at com.sun.proxy.$Proxy37.getConnection(Unknown Source)
at org.springframework.jdbc.datasource.DataSourceUtils.doGetConnection(DataSourceUtils.java:111)
at org.springframework.jdbc.datasource.DataSourceUtils.getConnection(DataSourceUtils.java:77)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:394)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:474)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:484)
at org.springframework.batch.item.database.JdbcPagingItemReader.doReadPage(JdbcPagingItemReader.java:208)
at org.springframework.batch.item.database.AbstractPagingItemReader.doRead(AbstractPagingItemReader.java:108)
at org.springframework.batch.item.support.AbstractItemCountingItemStreamItemReader.read(AbstractItemCountingItemStreamItemReader.java:88)
at org.springframework.batch.item.support.SynchronizedItemStreamReader.read(SynchronizedItemStreamReader.java:55)
at org.springframework.batch.core.step.item.SimpleChunkProvider.doRead(SimpleChunkProvider.java:91)
at org.springframework.batch.core.step.item.SimpleChunkProvider.read(SimpleChunkProvider.java:157)
at org.springframework.batch.core.step.item.SimpleChunkProvider$1.doInIteration(SimpleChunkProvider.java:116)
at org.springframework.batch.repeat.support.RepeatTemplate.getNextResult(RepeatTemplate.java:374)
at org.springframework.batch.repeat.support.RepeatTemplate.executeInternal(RepeatTemplate.java:215)
at org.springframework.batch.repeat.support.RepeatTemplate.iterate(RepeatTemplate.java:144)
at org.springframework.batch.core.step.item.SimpleChunkProvider.provide(SimpleChunkProvider.java:110)
at org.springframework.batch.core.step.item.ChunkOrientedTasklet.execute(ChunkOrientedTasklet.java:69)
at org.springframework.batch.core.step.tasklet.TaskletStep$ChunkTransactionCallback.doInTransaction(TaskletStep.java:406)
at org.springframework.batch.core.step.tasklet.TaskletStep$ChunkTransactionCallback.doInTransaction(TaskletStep.java:330)
at org.springframework.transaction.support.TransactionTemplate.execute(TransactionTemplate.java:133)
at org.springframework.batch.core.step.tasklet.TaskletStep$2.doInChunkContext(TaskletStep.java:271)
at org.springframework.batch.core.scope.context.StepContextRepeatCallback.doInIteration(StepContextRepeatCallback.java:81)
at org.springframework.batch.repeat.support.TaskExecutorRepeatTemplate$ExecutingRunnable.run(TaskExecutorRepeatTemplate.java:262)
at org.springframework.core.task.SimpleAsyncTaskExecutor$ConcurrencyThrottlingRunnable.run(SimpleAsyncTaskExecutor.java:268)
at java.lang.Thread.run(Unknown Source)
Caused by: javax.naming.NameNotFoundException: Name [java:comp/env/jdbc/RCMatcherDS] is not bound in this Context. Unable to find [java:comp].
at org.apache.naming.NamingContext.lookup(NamingContext.java:817)
at org.apache.naming.NamingContext.lookup(NamingContext.java:174)
at javax.naming.InitialContext.lookup(Unknown Source)
at org.springframework.jndi.JndiTemplate$1.doInContext(JndiTemplate.java:155)
at org.springframework.jndi.JndiTemplate.execute(JndiTemplate.java:87)
at org.springframework.jndi.JndiTemplate.lookup(JndiTemplate.java:152)
at org.springframework.jndi.JndiTemplate.lookup(JndiTemplate.java:179)
at org.springframework.jndi.JndiLocatorSupport.lookup(JndiLocatorSupport.java:95)
at org.springframework.jndi.JndiObjectLocator.lookup(JndiObjectLocator.java:106)
at org.springframework.jndi.JndiObjectTargetSource.getTarget(JndiObjectTargetSource.java:135)
... 34 more
We are seeing below error while starting SonarQube service. Looks like there is a duplicate entry while registering Quality Profile but I am not sure on the table. Since the service is not started, we cannot verify it from web. Can someone please advise.
The issue occurred post creation of a new DB and copy of tables data from old DB. We are performing this to check new collation which is required for Sonar.
2016.04.26 15:41:53 INFO web[o.s.s.s.RegisterDebtModel] Register technical debt model
2016.04.26 15:41:53 INFO web[o.s.s.r.RegisterRules] Register rules
2016.04.26 15:41:58 INFO web[o.s.s.q.RegisterQualityProfiles] Register quality profiles
2016.04.26 15:42:00 INFO web[o.s.s.n.NotificationService] Notification service stopped
2016.04.26 15:42:00 ERROR web[o.a.c.c.C.[.[.[/]] Exception sending context initialized event to listener instance of class org.sonar.server.platform.PlatformServletContextListener
org.apache.ibatis.exceptions.TooManyResultsException: Expected one result (or null) to be returned by selectOne(), but found: 2
at org.apache.ibatis.session.defaults.DefaultSqlSession.selectOne(DefaultSqlSession.java:70) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.binding.MapperMethod.execute(MapperMethod.java:68) ~[mybatis-3.2.7.jar:3.2.7]
at org.apache.ibatis.binding.MapperProxy.invoke(MapperProxy.java:52) ~[mybatis-3.2.7.jar:3.2.7]
at com.sun.proxy.$Proxy34.selectDefaultProfile(Unknown Source) ~[na:na]
at org.sonar.db.qualityprofile.QualityProfileDao.selectDefaultProfile(QualityProfileDao.java:176) ~[sonar-db-5.3.jar:na]
at org.sonar.server.qualityprofile.RegisterQualityProfiles.setDefault(RegisterQualityProfiles.java:161) ~[sonar-server-5.3.jar:na]
at org.sonar.server.qualityprofile.RegisterQualityProfiles.registerProfilesForLanguage(RegisterQualityProfiles.java:131) ~[sonar-server-5.3.jar:na]
at org.sonar.server.qualityprofile.RegisterQualityProfiles.start(RegisterQualityProfiles.java:95) ~[sonar-server-5.3.jar:na]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.7.0_25]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) ~[na:1.7.0_25]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.7.0_25]
at java.lang.reflect.Method.invoke(Method.java:606) ~[na:1.7.0_25]
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.invokeMethod(ReflectionLifecycleStrategy.java:110) ~[picocontainer-2.15.jar:na]
at org.picocontainer.lifecycle.ReflectionLifecycleStrategy.start(ReflectionLifecycleStrategy.java:89) ~[picocontainer-2.15.jar:na]
at org.sonar.core.platform.ComponentContainer$1.start(ComponentContainer.java:291) ~[sonar-core-5.3.jar:na]
at org.picocontainer.injectors.AbstractInjectionFactory$LifecycleAdapter.start(AbstractInjectionFactory.java:84) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.AbstractBehavior.start(AbstractBehavior.java:169) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.Stored$RealComponentLifecycle.start(Stored.java:132) ~[picocontainer-2.15.jar:na]
at org.picocontainer.behaviors.Stored.start(Stored.java:110) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.potentiallyStartAdapter(DefaultPicoContainer.java:1016) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.startAdapters(DefaultPicoContainer.java:1009) ~[picocontainer-2.15.jar:na]
at org.picocontainer.DefaultPicoContainer.start(DefaultPicoContainer.java:767) ~[picocontainer-2.15.jar:na]
at org.sonar.core.platform.ComponentContainer.startComponents(ComponentContainer.java:131) ~[sonar-core-5.3.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevel.start(PlatformLevel.java:84) ~[sonar-server-5.3.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevelStartup.access$001(PlatformLevelStartup.java:45) ~[sonar-server-5.3.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevelStartup$1.doPrivileged(PlatformLevelStartup.java:82) ~[sonar-server-5.3.jar:na]
at org.sonar.server.user.DoPrivileged.execute(DoPrivileged.java:45) ~[sonar-server-5.3.jar:na]
at org.sonar.server.platform.platformlevel.PlatformLevelStartup.start(PlatformLevelStartup.java:78) ~[sonar-server-5.3.jar:na]
at org.sonar.server.platform.Platform.executeStartupTasks(Platform.java:197) ~[sonar-server-5.3.jar:na]
at org.sonar.server.platform.Platform.doStart(Platform.java:114) ~[sonar-server-5.3.jar:na]
at org.sonar.server.platform.Platform.doStart(Platform.java:99) ~[sonar-server-5.3.jar:na]
at org.sonar.server.platform.PlatformServletContextListener.contextInitialized(PlatformServletContextListener.java:43) ~[sonar-server-5.3.jar:na]
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4720) [tomcat-embed-core-8.0.18.jar:8.0.18]
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5154) [tomcat-embed-core-8.0.18.jar:8.0.18]
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150) ~[tomcat-embed-core-8.0.18.jar:8.0.18]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1409) ~[tomcat-embed-core-8.0.18.jar:8.0.18]
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1399) ~[tomcat-embed-core-8.0.18.jar:8.0.18]
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) ~[na:1.7.0_25]
at java.util.concurrent.FutureTask.run(FutureTask.java:166) ~[na:1.7.0_25]
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) ~[na:1.7.0_25]
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) ~[na:1.7.0_25]