java.lang.ClassNotFoundException: org.apache.log4j.Logger with elasticsearch and neo4j - maven

I am writing a neo4j plugin in which I want to use elasticsearch. While running the neo4j, I am getting the following error:
ERROR Failed to start Neo4j: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#435a13ac' was successfully initialized, but failed to start. Please see the attached cause exception "org.apache.log4j.Logger". Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#435a13ac' was successfully initialized, but failed to start. Please see the attached cause exception "org.apache.log4j.Logger".
org.neo4j.server.ServerStartupException: Starting Neo4j failed: Component 'org.neo4j.server.database.LifecycleManagingDatabase#435a13ac' was successfully initialized, but failed to start. Please see the attached cause exception "org.apache.log4j.Logger".
at org.neo4j.server.exception.ServerStartupErrors.translateToServerStartupError(ServerStartupErrors.java:68)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:219)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:111)
at org.neo4j.server.ServerBootstrapper.start(ServerBootstrapper.java:79)
at org.neo4j.server.CommunityEntryPoint.main(CommunityEntryPoint.java:32)
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.server.database.LifecycleManagingDatabase#435a13ac' was successfully initialized, but failed to start. Please see the attached cause exception "org.apache.log4j.Logger".
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:211)
... 3 more
Caused by: java.lang.RuntimeException: Error starting org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory, /home/gaurav_verma/.ineo/instances/staging2/data/databases/graph.db
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:211)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.newFacade(GraphDatabaseFacadeFactory.java:126)
at org.neo4j.server.CommunityNeoServer.lambda$static$0(CommunityNeoServer.java:58)
at org.neo4j.server.database.LifecycleManagingDatabase.start(LifecycleManagingDatabase.java:88)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 5 more
Caused by: org.neo4j.kernel.lifecycle.LifecycleException: Component 'org.neo4j.kernel.impl.proc.Procedures#72c8de78' was successfully initialized, but failed to start. Please see the attached cause exception "org.apache.log4j.Logger".
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:466)
at org.neo4j.kernel.lifecycle.LifeSupport.start(LifeSupport.java:107)
at org.neo4j.kernel.impl.factory.GraphDatabaseFacadeFactory.initFacade(GraphDatabaseFacadeFactory.java:207)
... 9 more
Caused by: java.lang.NoClassDefFoundError: Lorg/apache/log4j/Logger;
at java.lang.Class.getDeclaredFields0(Native Method)
at java.lang.Class.privateGetDeclaredFields(Class.java:2583)
at java.lang.Class.getDeclaredFields(Class.java:1916)
at org.neo4j.kernel.impl.proc.FieldInjections.setters(FieldInjections.java:90)
at org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileFunction(ReflectiveProcedureCompiler.java:318)
at org.neo4j.kernel.impl.proc.ReflectiveProcedureCompiler.compileFunction(ReflectiveProcedureCompiler.java:119)
at org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProcedures(ProcedureJarLoader.java:95)
at org.neo4j.kernel.impl.proc.ProcedureJarLoader.loadProceduresFromDir(ProcedureJarLoader.java:82)
at org.neo4j.kernel.impl.proc.Procedures.start(Procedures.java:275)
at org.neo4j.kernel.lifecycle.LifeSupport$LifecycleInstance.start(LifeSupport.java:445)
... 11 more
Caused by: java.lang.ClassNotFoundException: org.apache.log4j.Logger
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:349)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 21 more
Following is my pom entries:
<dependency>
<groupId>org.elasticsearch.client</groupId>
<artifactId>transport</artifactId>
<version>6.2.4</version>
</dependency>
<dependency>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
<version>1.2.17</version>
</dependency>
I have tried using the log4j-core and log4j-api pom entries also, but still getting the same error. I also saw the dependency tree and found two conflicting versions of commons-logging:commons-logging:jar , but I don't know how to solve this.
Can anyone tell me what is the issue and how to solve this.

Please try with this dependency:
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>log4j-over-slf4j</artifactId>
<version>1.7.25</version>
</dependency>
Often, you can resolve such exceptions by searching for the full class name on search.maven.org.

Related

Does ScyllaDB Support Latest Version of Metrics?

When I launch ScyllaDB for the first time:
Cluster cluster = Cluster.builder().addContactPoints("xx.xxx.xx.xxx").build();
Session session = cluster.connect("my_scylladb_cluster");
System.out.println(session.isClosed());
I get the following error:
===== Using optimized driver!!! =====
Exception in thread "main" java.lang.NoClassDefFoundError: com/codahale/metrics/JmxReporter
at com.datastax.driver.core.Metrics.<init>(Metrics.java:156)
at com.datastax.driver.core.Cluster$Manager.init(Cluster.java:1773)
at com.datastax.driver.core.Cluster.init(Cluster.java:228)
at com.datastax.driver.core.Cluster.connectAsync(Cluster.java:401)
at com.datastax.driver.core.Cluster.connect(Cluster.java:352)
at scylladbX.ScyllaDBXMain.main(ScyllaDBMain.java:12)
Caused by: java.lang.ClassNotFoundException: com.codahale.metrics.JmxReporter
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:349)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 6 more
In my Maven POM file I'm using the latest version of Metrics:
<dependency>
<groupId>io.dropwizard.metrics</groupId>
<artifactId>metrics-core</artifactId>
<version>4.2.9</version>
</dependency>
<!-- https://mvnrepository.com/artifact/io.dropwizard.metrics/metrics-graphite -->
<dependency>
<groupId>io.dropwizard.metrics</groupId>
<artifactId>metrics-graphite</artifactId>
<version>4.2.9</version>
</dependency>
I noticed that if I downgrade to a much earlier version of Metrics, the problem goes away:
<!-- https://mvnrepository.com/artifact/com.codahale.metrics/metrics-core -->
<dependency>
<groupId>com.codahale.metrics</groupId>
<artifactId>metrics-core</artifactId>
<version>3.0.0</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.codahale.metrics/metrics-graphite -->
<dependency>
<groupId>com.codahale.metrics</groupId>
<artifactId>metrics-graphite</artifactId>
<version>3.0.0</version>
</dependency>
Does ScyllaDB not support the latest version of Metrics? What is the latest version supported?
Thanks
The DataStax Java Driver documentation here has a section about the problem you saw:
While the driver depends on Metrics 3.2.x, it also works with Metrics 4, with some caveats.
In Metrics 4, JMX reporting was moved to a separate module, metrics-jmx. Because of this you are likely to encounter the following exception at runtime when initializing a Cluster:
Exception in thread "main" java.lang.NoClassDefFoundError: com/codahale/metrics/JmxReporter
at com.datastax.driver.core.Metrics.<init>(Metrics.java:103)
at com.datastax.driver.core.Cluster$Manager.init(Cluster.java:1402)
at com.datastax.driver.core.Cluster.init(Cluster.java:159)
at com.datastax.driver.core.Cluster.connectAsync(Cluster.java:330)
at com.datastax.driver.core.Cluster.connectAsync(Cluster.java:305)
at com.datastax.durationtest.core.DurationTest.createSessions(DurationTest.java:360)
....
Caused by: java.lang.ClassNotFoundException: com.codahale.metrics.JmxReporter
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:582)
at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:185)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:496)
... 8 more
That document also has suggestions what to do in this case.
In any case, this problem has nothing to do with Scylla (the backend server you want to connect to) - and is just a problem with the Java client ("driver") you are using.

Why I get java.lang.ClassNotFoundException: org.h2.Driver?

I'm trying to deploy a bundle in karaf. I want to create a process engine inside of it which connects to h2 database. I have the dependency in pom.xml:
<dependency>
<groupId>com.h2database</groupId>
<artifactId>h2</artifactId>
<version>1.4.190</version>
</dependency>
In ini() method I try to create engine process using:
ProcessEngine processEngine = ProcessEngineConfiguration.createStandaloneInMemProcessEngineConfiguration()
.setDatabaseSchemaUpdate(ProcessEngineConfiguration.DB_SCHEMA_UPDATE_FALSE)
.setJdbcUrl("jdbc:h2:mem:my-own-db;DB_CLOSE_DELAY=1000")
.setJobExecutorActivate(true)
.buildProcessEngine();
Nevertheless, in karaf console when I deploy the bundle I got the error:
Caused by: org.apache.ibatis.datasource.DataSourceException: Error setting driver on UnpooledDataSource. Cause: java.lang.ClassNotFoundException: org.h2.Driver
at org.apache.ibatis.datasource.unpooled.UnpooledDataSource.initializeDriver(UnpooledDataSource.java:179)
at org.apache.ibatis.datasource.unpooled.UnpooledDataSource.getConnection(UnpooledDataSource.java:57)
at org.apache.ibatis.datasource.pooled.PooledDataSource.popConnection(PooledDataSource.java:349)
at org.apache.ibatis.datasource.pooled.PooledDataSource.getConnection(PooledDataSource.java:55)
.......
Caused by: java.lang.ClassNotFoundException: org.h2.Driver
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:418)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:355)
at java.lang.ClassLoader.loadClass(ClassLoader.java:351)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
at org.apache.ibatis.datasource.unpooled.UnpooledDataSource.initializeDriver(UnpooledDataSource.java:173)
Could you print the built MANIFEST ?
And the result of bundle:headers
I guess your bundle try to import h2 Driver because you did not set it to private.
Quick fix, in karaf, run
bundle:install mvn:com.h2database/h2/1.4.199

What depends on netty-tcnative in Quarkus?

This pertains to a GitHub issue where TensorFlow is being loaded at runtime for native image:
https://github.com/awslabs/djl/issues/103#issuecomment-658549779
It causes a io.netty.internal.tcnative.SSLPrivateKeyMethod class not found error during native image compilation. If I add this dependency, the error goes away:
<dependency>
<groupId>io.netty</groupId>
<artifactId>netty-tcnative</artifactId>
<version>2.0.31.Final</version>
</dependency>
Here is the stack trace:
Fatal error:java.lang.NoClassDefFoundError
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
at java.base/java.util.concurrent.ForkJoinTask.getThrowableException(ForkJoinTask.java:603)
at java.base/java.util.concurrent.ForkJoinTask.get(ForkJoinTask.java:1006)
at com.oracle.svm.hosted.NativeImageGenerator.run(NativeImageGenerator.java:463)
at com.oracle.svm.hosted.NativeImageGeneratorRunner.buildImage(NativeImageGeneratorRunner.java:359)
at com.oracle.svm.hosted.NativeImageGeneratorRunner.build(NativeImageGeneratorRunner.java:518)
at com.oracle.svm.hosted.NativeImageGeneratorRunner.main(NativeImageGeneratorRunner.java:117)
at com.oracle.svm.hosted.NativeImageGeneratorRunner$JDK9Plus.main(NativeImageGeneratorRunner.java:546)
Caused by: java.lang.NoClassDefFoundError: io/netty/internal/tcnative/SSLPrivateKeyMethod
at jdk.internal.vm.ci/jdk.vm.ci.hotspot.CompilerToVM.getDeclaredMethods(Native Method)
at jdk.internal.vm.ci/jdk.vm.ci.hotspot.HotSpotResolvedObjectTypeImpl.getDeclaredMethods(HotSpotResolvedObjectTypeImpl.java:958)
at com.oracle.svm.jni.access.JNIAccessibleMethod.anyMatchIgnoreReturnType(JNIAccessibleMethod.java:139)
at com.oracle.svm.jni.access.JNIAccessibleMember.findHidingSubclasses(JNIAccessibleMember.java:103)
at com.oracle.svm.jni.access.JNIAccessibleMember.findHidingSubclasses(JNIAccessibleMember.java:110)
at com.oracle.svm.jni.access.JNIAccessibleMember.setHidingSubclasses(JNIAccessibleMember.java:83)
at com.oracle.svm.jni.access.JNIAccessibleMethod.finishBeforeCompilation(JNIAccessibleMethod.java:135)
at com.oracle.svm.jni.access.JNIAccessFeature.beforeCompilation(JNIAccessFeature.java:348)
at com.oracle.svm.hosted.NativeImageGenerator.lambda$doRun$2(NativeImageGenerator.java:595)
at com.oracle.svm.hosted.FeatureHandler.forEachFeature(FeatureHandler.java:70)
at com.oracle.svm.hosted.NativeImageGenerator.doRun(NativeImageGenerator.java:595)
at com.oracle.svm.hosted.NativeImageGenerator.lambda$run$0(NativeImageGenerator.java:451)
at java.base/java.util.concurrent.ForkJoinTask$AdaptedRunnableAction.exec(ForkJoinTask.java:1407)
at java.base/java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290)
at java.base/java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020)
at java.base/java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656)
at java.base/java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594)
at java.base/java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:177)
Caused by: java.lang.ClassNotFoundException: io.netty.internal.tcnative.SSLPrivateKeyMethod
at java.base/java.net.URLClassLoader.findClass(URLClassLoader.java:471)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:589)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:522)
... 18 more
It is definitely related to one of the following configs, and does also seem to be impacted by JNI, but I am not sure how.
quarkus.native.enable-jni=true
quarkus.ssl.native=true
quarkus.native.additional-build-args=--initialize-at-run-time=org.tensorflow\\,ai.djl\\,org.bytedeco
In searching through the Quarkus GitHub repos, I cannot find reference to netty-tcnative. I really do not understand why this is needed as it seems to be related to Tomcat?
In order to fix this problem, or file a GitHub issue, need to understand where this dependency is expected.

jdiameter-ha-* ClassNotFoundException

I'm attempting introduce high availability mode (via JBoss Cache) in my server implementation (essentially an expanded version of the example server) by configuring my Maven project to use jdiameter-ha-api and jdiameter-ha-impl dependencies instead of jdiameter-api and jdiameter-impl, in addition to adding the following extensions to jdiameter-config.xml:
<Extensions>
<SessionDatasource value="org.mobicents.diameter.impl.ha.data.ReplicatedSessionDatasource"/>
<TimerFacility value="org.mobicents.diameter.impl.ha.timer.ReplicatedTimerFacilityImpl"/>
</Extensions>
Now, when I run the server from Eclipse, it works fine, i.e. it start up in clustered mode (w/ JBoss Cache), however, when I attempt to run the jar produced by mvn install, it throws the following error:
2018-10-11 18:24:13,899 - (-)(-)(-)(-)(-) Starting Mobicents DIAMETER Stack v1.7.0-SNAPSHOT (-)(-)(-)(-)(-)
2018-10-11 18:24:13,959 - Failure creating stack 'Server'
org.jdiameter.api.InternalException: java.lang.reflect.InvocationTargetException
at org.jdiameter.client.impl.StackImpl.init(StackImpl.java:135)
at com.company.charging.diameter.ocf.utilities.StackCreator.<init>(StackCreator.java:37)
at com.company.charging.diameter.ocf.utilities.StackCreator.<init>(StackCreator.java:71)
at com.company.charging.diameter.ocf.server.Ocf.<init>(Ocf.java:187)
at com.company.charging.diameter.ocf.server.Ocf.main(Ocf.java:157)
Caused by: java.lang.reflect.InvocationTargetException
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
at org.jdiameter.client.impl.StackImpl.init(StackImpl.java:129)
... 4 more
Caused by: java.lang.ClassNotFoundException: org.mobicents.diameter.impl.ha.timer.ReplicatedTimerFacilityImpl
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:582)
at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:190)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:499)
at java.base/java.lang.Class.forName0(Native Method)
at java.base/java.lang.Class.forName(Class.java:291)
at org.jdiameter.client.impl.helpers.AssemblerImpl.fill(AssemblerImpl.java:139)
at org.jdiameter.client.impl.helpers.AssemblerImpl.<init>(AssemblerImpl.java:91)
... 9 more
Given that it starts up in Eclipse just fine, I'm assuming my POM file isn't managing dependencies properly, so that the final jar is missing these classes. Here's the relevant portion of my pom.xml:
<dependencies>
<dependency>
<groupId>org.mobicents.diameter</groupId>
<artifactId>jdiameter-ha-api</artifactId>
<version>${restcomm.diameter.jdiameter.version}</version>
</dependency>
<dependency>
<groupId>org.mobicents.diameter</groupId>
<artifactId>jdiameter-ha-impl</artifactId>
<version>${restcomm.diameter.jdiameter.version}</version>
</dependency>
<dependency>
<groupId>org.mobicents.diameter</groupId>
<artifactId>restcomm-diameter-mux-jar</artifactId>
<version>${restcomm.diameter.mux.version}</version>
</dependency>
</dependencies>

ClassNotFoundException: DirectoryService with apacheds-all already included

I am implemented LDAP authentication in my Spring Boot Application. The dependencies added are as follows:
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-security</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.security</groupId>
<artifactId>spring-security-ldap</artifactId>
</dependency>
<dependency>
<groupId>org.apache.directory.server</groupId>
<artifactId>apacheds-all</artifactId>
</dependency>
However I am still getting following ClassNotFoundException:
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'springSecurityFilterChain'
Caused by: org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.servlet.Filter]
Caused by: java.lang.NoClassDefFoundError: org/apache/directory/server/core/DirectoryService
Caused by: java.lang.ClassNotFoundException: org.apache.directory.server.core.DirectoryService
My maven dependency tree clearly shows apacheds-all is added successfully.
Why am I still getting this error?
Spring Security doesn't support Apache DS 2.0. Instead, you need to use 1.5.5. Also, note that later 1.5.x versions are not supported due to breaking API changes.

Resources