Unable to import data from Informix non transactional database to HDFS - sqoop

I'am trying to import a table from an Informix DB to HDFS. I'am using Cloudera distribution. I have made sure that the jars are correctly placed under /var/lib/sqoop folder on the host where I'am running the command.
Below is the command and the error that I'am receiving.
Sqoop Command:
sqoop import --connect jdbc:informix-sqli://mgomtcmsp1:50001/cms:INFORMIXSERVER=fmg_pgomtp1 \
--username AL667RE \
--target-dir "/data/raw/manage_agex" \
--password Bdhuern#17892 \
--table agex \
--driver com.informix.jdbc.IfxDriver
Error:
18/09/03 10:54:49 ERROR manager.SqlManager: Error executing statement: java.sql.SQLException: No Transaction Isolation on non-logging db's
java.sql.SQLException: No Transaction Isolation on non-logging db's
at com.informix.util.IfxErrMsg.getSQLException(IfxErrMsg.java:348)
at com.informix.jdbc.IfxSqliConnect.setTransactionIsolation(IfxSqliConnect.java:2012)
at org.apache.sqoop.manager.SqlManager.makeConnection(SqlManager.java:910)
at org.apache.sqoop.manager.GenericJdbcManager.getConnection(GenericJdbcManager.java:52)
at org.apache.sqoop.manager.SqlManager.execute(SqlManager.java:763)
at org.apache.sqoop.manager.SqlManager.execute(SqlManager.java:786)
at org.apache.sqoop.manager.SqlManager.getColumnInfoForRawQuery(SqlManager.java:289)
at org.apache.sqoop.manager.SqlManager.getColumnTypesForRawQuery(SqlManager.java:260)
at org.apache.sqoop.manager.SqlManager.getColumnTypes(SqlManager.java:246)
at org.apache.sqoop.manager.ConnManager.getColumnTypes(ConnManager.java:327)
at org.apache.sqoop.orm.ClassWriter.getColumnTypes(ClassWriter.java:1858)
at org.apache.sqoop.orm.ClassWriter.generate(ClassWriter.java:1657)
at org.apache.sqoop.tool.CodeGenTool.generateORM(CodeGenTool.java:106)
at org.apache.sqoop.tool.ImportTool.importTable(ImportTool.java:494)
at org.apache.sqoop.tool.ImportTool.run(ImportTool.java:621)
at org.apache.sqoop.Sqoop.run(Sqoop.java:147)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:183)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:234)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:243)
at org.apache.sqoop.Sqoop.main(Sqoop.java:252)
18/09/03 10:54:49 ERROR tool.ImportTool: Import failed: java.io.IOException: No columns to generate for ClassWriter
at org.apache.sqoop.orm.ClassWriter.generate(ClassWriter.java:1663)
at org.apache.sqoop.tool.CodeGenTool.generateORM(CodeGenTool.java:106)
at org.apache.sqoop.tool.ImportTool.importTable(ImportTool.java:494)
at org.apache.sqoop.tool.ImportTool.run(ImportTool.java:621)
at org.apache.sqoop.Sqoop.run(Sqoop.java:147)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:183)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:234)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:243)
at org.apache.sqoop.Sqoop.main(Sqoop.java:252)

Related

Why can't I find the file when importing from sqoop?

I try to import mysql table into hive through sqoop.
I used the command below.
sqoop import --username testuser --password test123 --num-mappers 1 --connect "jdbc:sqlserver://testdomain.com:2031;database=test_db" --target-dir /sqoop_batch/ --append --as-textfile --table test_table
However, an error occurred at the bottom error occurred.
...
2022-03-29 09:47:23,322 INFO mapreduce.JobSubmitter: Submitting tokens for job: job_1648452113129_0011
2022-03-29 09:47:23,324 INFO mapreduce.JobSubmitter: Executing with tokens: []
2022-03-29 09:47:23,376 INFO mapreduce.JobSubmitter: Cleaning up the staging area /user/root/.staging/job_1648452113129_0011
2022-03-29 09:47:23,387 ERROR tool.ImportTool: Import failed: java.io.FileNotFoundException: File does not exist: hdfs://mycluster:8020/user/root/.staging/job_1648452113129_0011
at org.apache.hadoop.fs.Hdfs.getFileStatus(Hdfs.java:145)
at org.apache.hadoop.fs.AbstractFileSystem.resolvePath(AbstractFileSystem.java:488)
at org.apache.hadoop.mapred.YARNRunner.setupLocalResources(YARNRunner.java:394)
at org.apache.hadoop.mapred.YARNRunner.createApplicationSubmissionContext(YARNRunner.java:573)
at org.apache.hadoop.mapred.YARNRunner.submitJob(YARNRunner.java:325)
at org.apache.hadoop.mapreduce.JobSubmitter.submitJobInternal(JobSubmitter.java:251)
at org.apache.hadoop.mapreduce.Job$11.run(Job.java:1570)
at org.apache.hadoop.mapreduce.Job$11.run(Job.java:1567)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1730)
at org.apache.hadoop.mapreduce.Job.submit(Job.java:1567)
at org.apache.hadoop.mapreduce.Job.waitForCompletion(Job.java:1588)
at org.apache.sqoop.mapreduce.ImportJobBase.doSubmitJob(ImportJobBase.java:200)
at org.apache.sqoop.mapreduce.ImportJobBase.runJob(ImportJobBase.java:173)
at org.apache.sqoop.mapreduce.ImportJobBase.runImport(ImportJobBase.java:270)
at org.apache.sqoop.manager.SqlManager.importTable(SqlManager.java:692)
at org.apache.sqoop.manager.SQLServerManager.importTable(SQLServerManager.java:163)
at org.apache.sqoop.tool.ImportTool.importTable(ImportTool.java:520)
at org.apache.sqoop.tool.ImportTool.run(ImportTool.java:628)
at org.apache.sqoop.Sqoop.run(Sqoop.java:147)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:76)
at org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:183)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:234)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:243)
at org.apache.sqoop.Sqoop.main(Sqoop.java:252)
NOTE. I also modified the permission to access the /user/root/.staging directory to 777, but it was not resolved.
NOTE. I also modified 'yarn.app.mapreduce.am.staging-dir' in 'yarn-site.xml', but it was not resolved.

java.lang.NoSuchMethodError: org.apache.hadoop.io.retry.RetryUtils.getDefaultRetryPolicy

I am trying to import mySql data to Hadoop using sqoop.
Environment:
Ubuntu 16.04
Hadoop 2.6.0-cdh5.16.1
Sqoop 1.4.7
On executing
sqoop import --connect jdbc:mysql://127.0.0.1/crawl_data_stats
--username root --password password --table auth_group
Exception in thread "main" java.lang.NoSuchMethodError: org.apache.hadoop.io.retry.RetryUtils.getDefaultRetryPolicy(Lorg/apache/hadoop/conf/Configuration;Ljava/lang/String;ZLjava/lang/String;Ljava/lang/String;Ljava/lang/Class;)Lorg/apache/hadoop/io/retry/RetryPolicy;
at org.apache.hadoop.hdfs.NameNodeProxies.createNNProxyWithClientProtocol(NameNodeProxies.java:408)
at org.apache.hadoop.hdfs.NameNodeProxies.createNonHAProxy(NameNodeProxies.java:314)
at org.apache.hadoop.hdfs.NameNodeProxies.createProxy(NameNodeProxies.java:176)
at org.apache.hadoop.hdfs.DFSClient.<init>(DFSClient.java:763)
at org.apache.hadoop.hdfs.DFSClient.<init>(DFSClient.java:694)
at org.apache.hadoop.hdfs.DistributedFileSystem.initialize(DistributedFileSystem.java:159)
at org.apache.hadoop.fs.FileSystem.createFileSystem(FileSystem.java:3303)
at org.apache.hadoop.fs.FileSystem.access$200(FileSystem.java:124)
at org.apache.hadoop.fs.FileSystem$Cache.getInternal(FileSystem.java:3352)
at org.apache.hadoop.fs.FileSystem$Cache.get(FileSystem.java:3320)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:479)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:227)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:463)
at org.apache.hadoop.fs.Path.getFileSystem(Path.java:361)
at org.apache.hadoop.mapreduce.lib.output.FileOutputFormat.setOutputPath(FileOutputFormat.java:160)
at org.apache.sqoop.mapreduce.ImportJobBase.configureOutputFormat(ImportJobBase.java:160)
at org.apache.sqoop.mapreduce.ImportJobBase.runImport(ImportJobBase.java:263)
at org.apache.sqoop.manager.SqlManager.importTable(SqlManager.java:692)
at org.apache.sqoop.manager.MySQLManager.importTable(MySQLManager.java:127)
at org.apache.sqoop.tool.ImportTool.importTable(ImportTool.java:520)
at org.apache.sqoop.tool.ImportTool.run(ImportTool.java:628)
at org.apache.sqoop.Sqoop.run(Sqoop.java:147)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:76)
at org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:183)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:234)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:243)
at org.apache.sqoop.Sqoop.main(Sqoop.java:252)

Table from sqoop 1.4.7 importing into HDFS is fine. while importing into hive 3.1.1

sqoop import --connect jdbc:mysql://localhost:3306/sqoopdb --username dsa -P
--split-by id --columns id,name --table employee --target-dir /test1
--fields-terminated-by "," --hive-import --create-hive-table
--hive-table employee_sqoop
Table from sqoop 1.4.7 importing into HDFS is fine. while importing into hive 3.1.1 getting
ERROR [main] tool.ImportTool: Import failed: java.io.IOException: Hive CliDriver exited with status=1
This is pseudo hadoop 3.1.1 cluster with hbase , sqoop , hive with latest versions....
I copy the libthrift*.jar file from hive/lib into sqoop/lib directory
And also I set HBASE_HOME to a non-existing path
copy jackson-annotations-2.9.5.jar,jackson-core-2.9.5.jar,jackson-databind-2.9.5.jar files into sqoop/lib folder*
ERROR [main] tool.ImportTool: Import failed: java.io.IOException: Hive CliDriver exited with status=1 at
org.apache.sqoop.hive.HiveImport.executeScript(HiveImport.java:355)
at org.apache.sqoop.hive.HiveImport.importTable(HiveImport.java:241)
at org.apache.sqoop.tool.ImportTool.importTable(ImportTool.java:537)
at org.apache.sqoop.tool.ImportTool.run(ImportTool.java:628) at
org.apache.sqoop.Sqoop.run(Sqoop.java:147) at
org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70) at
org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:183) at
org.apache.sqoop.Sqoop.runTool(Sqoop.java:234) at
org.apache.sqoop.Sqoop.runTool(Sqoop.java:243) at
org.apache.sqoop.Sqoop.main(Sqoop.java:252)

Exporting the table from hive to Oracle server

When I am importing the table from Oracle db to hive is fine but when I am exporting the data from hive to db I got the error. I am performing the fallowing query operation.
sqoop export
--connect jdbc:oracle:thin:#oragmp01prscan.enterprisenet.org:1521/GMP1PROD_RLB
--username GMPAPMETA
--password welcome123
--table activity/
--export-dir hdfs://user/hive/warehouse/activity/
ERROR:
at org.apache.sqoop.tool.ExportTool.run(ExportTool.java:100)
at org.apache.sqoop.Sqoop.run(Sqoop.java:143)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:179)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:218)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:227)
at org.apache.sqoop.Sqoop.main(Sqoop.java:236)
15/11/05 01:18:28 ERROR tool.ExportTool:
Encountered IOException running export job:
java.io.IOException: No columns to generate for ClassWriter

Sqoop connecting between EMR and Netezza

We are not able to connect to Netezza from EMR via sqoop connection. Below is the error message. I am wondering if there is some port need to be open in Netezza host. Thanks.
./sqoop-1.4.5.bin__hadoop-1.0.0/bin/sqoop list-tables --connect jdbc:netezza://<NETEZZA-HOST>/<NETEZZA-DB> --username XXXX --password XXXX
15/02/12 23:30:43 ERROR sqoop.Sqoop: Got exception running Sqoop: java.lang.NullPointerException
java.lang.NullPointerException
at org.netezza.internal.NzSocket.sendChar(NzSocket.java:84)
at org.netezza.sql.NzConnection.close(NzConnection.java:1187)
at org.netezza.sql.NzConnection.initSocket(NzConnection.java:2673)
at org.netezza.sql.NzConnection.open(NzConnection.java:260)
at org.netezza.datasource.NzDatasource.getConnection(NzDatasource.java:523)
at org.netezza.datasource.NzDatasource.getConnection(NzDatasource.java:510)
at org.netezza.Driver.connect(Driver.java:153)
at java.sql.DriverManager.getConnection(DriverManager.java:571)
at java.sql.DriverManager.getConnection(DriverManager.java:215)
at org.apache.sqoop.manager.SqlManager.makeConnection(SqlManager.java:877)
at org.apache.sqoop.manager.GenericJdbcManager.getConnection(GenericJdbcManager.java:52)
at org.apache.sqoop.manager.SqlManager.listTables(SqlManager.java:517)
at org.apache.sqoop.tool.ListTablesTool.run(ListTablesTool.java:49)
at org.apache.sqoop.Sqoop.run(Sqoop.java:143)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.sqoop.Sqoop.runSqoop(Sqoop.java:179)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:218)
at org.apache.sqoop.Sqoop.runTool(Sqoop.java:227)
at org.apache.sqoop.Sqoop.main(Sqoop.java:236)

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