Slicing A Numpy Array Giving Wrong Results - numpy-slicing

I have a numpy array that I am trying to slice along the first two columns and first two rows, and then set those equal to 0.
In my code you can see my attempt to try and do so. I am having no end of trouble in terms of getting the right amount of numbers to be set to 0.
nums = np.array([[1,2,3,4],[5,6,7,8],[9,10,11,12],[13,14,15,16]])
nums[0:2,0:2] = 0
print(nums)
The output should be
[[0 0 0 0
0 0 0 0
0 0 11 12
0 0 15 16]]
My output is
[[ 0 0 3 4]
[ 0 0 7 8]
[ 9 10 11 12]
[13 14 15 16]]
Any advice or insight as to why it is not displaying properly would be greatly appreciated.

You should do operation like this:
nums = np.array([[1,2,3,4],[5,6,7,8],[9,10,11,12],[13,14,15,16]])
nums[0:2,:] = 0
nums[:, 0:2] = 0
print(nums)
Then output should be
[[0 0 0 0
0 0 0 0
0 0 11 12
0 0 15 16]]

Related

Fill an n*n array with 1s and 0s

So Im trying to fill in array with 1s and 0s given the number of elements in each row and column.
for example if i have been given
int Row = {2, 2, 2, 3};
int Column = { 3, 2, 1, 3};
then a possible solution is
1 0 0 1
1 1 0 0
0 0 1 1
1 1 0 1
secondly is there any combination in which a valid solution is not possible even if the sum of both arrays (column and row) are equal. In my case it should be valid because 3+2+1+3=2+2+2+3 but is there any case in which both the sums are equal but there still doesn't exist a stable combination.
The answer i found was a greedy approach in which answer each subproblem. So i go column by column and fill in each column depending on the weight of the row.
Remember indexing start with 0
I start with column 0
since row 3 has the highest value (3) i fill it
0 0 0 0
0 0 0 0
0 0 0 0
1 0 0 0
now the row and column array are as follows
row = {2,2,2,2}
column = {2,2,1,3}
i keep filling until i can no longer insert more i.e column[0]=0
1 0 0 0
0 0 0 0
0 0 0 0
1 0 0 0
row = {1,2,2,2}
column={2,2,1,2}
1 0 0 0
1 0 0 0
0 0 0 0
1 0 0 0
row = {1,1,2,2}
column={2,1,1,2}
now since column[0]==0 i can go to the next column and perform the same procedure again

Convert binary values to a decimal matrix

Suppose that I have a matrix a= [1 3; 4 2], I convert this matrix to binary format using this code:
a=magic(2)
y=dec2bin(a,8)
e=str2num(y(:))';
The result is :
y =
00000001
00000100
00000011
00000010
e =
Columns 1 through 17
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Columns 18 through 32
0 0 0 0 1 0 0 0 0 1 1 1 0 1 0
Now when I want to get back my original matrix I inverse the functions :
s=num2str(e(:))';
r=bin2dec(s)
The results I got is:
r =
1082
What can I do to get the orignal matrix? not a number
Thank you in advance
You are doing extra processes which destroyed the original structure:
a=magic(2)
y=dec2bin(a,8)
r=bin2dec(y)
Here r is your answer since y has removed the matrix structure of a. To recreate your matrix, you need to:
originalmatrix = reshape(r,size(a))
originalmatrix =
1 3
4 2
I finally got the right solution for my problem and I want to share it in case anyone need it :
a_back=reshape(bin2dec(num2str(reshape(e, 4, []))), 2, 2)
a =
1 3
4 2

Sorting rows and columns of adjacency matrix to reveal cliques

I'm looking for a reordering technique to group connected components of an adjacency matrix together.
For example, I've made an illustration with two groups, blue and green. Initially the '1's entries are distributed across the rows and columns of the matrix. By reordering the rows and columns, all '1''s can be located in two contiguous sections of the matrix, revealing the blue and green components more clearly.
I can't remember what this reordering technique is called. I've searched for many combinations of adjacency matrix, clique, sorting, and reordering.
The closest hits I've found are
symrcm moves the elements closer to the diagonal, but does not make groups.
Is there a way to reorder the rows and columns of matrix to create a dense corner, in R? which focuses on removing completely empty rows and columns
Please either provide the common name for this technique so that I can google more effectively, or point me in the direction of a Matlab function.
I don't know whether there is a better alternative which should give you direct results, but here is one approach which may serve your purpose.
Your input:
>> A
A =
0 1 1 0 1
1 0 0 1 0
0 1 1 0 1
1 0 0 1 0
0 1 1 0 1
Method 1
Taking first row and first column as Column-Mask(maskCol) and
Row-Mask(maskRow) respectively.
Get the mask of which values contains ones in both first row, and first column
maskRow = A(:,1)==1;
maskCol = A(1,:)~=1;
Rearrange the Rows (according to the Row-mask)
out = [A(maskRow,:);A(~maskRow,:)];
Gives something like this:
out =
1 0 0 1 0
1 0 0 1 0
0 1 1 0 1
0 1 1 0 1
0 1 1 0 1
Rearrange columns (according to the column-mask)
out = [out(:,maskCol),out(:,~maskCol)]
Gives the desired results:
out =
1 1 0 0 0
1 1 0 0 0
0 0 1 1 1
0 0 1 1 1
0 0 1 1 1
Just a check whether the indices are where they are supposed to be or if you want the corresponding re-arranged indices ;)
Before Re-arranging:
idx = reshape(1:25,5,[])
idx =
1 6 11 16 21
2 7 12 17 22
3 8 13 18 23
4 9 14 19 24
5 10 15 20 25
After re-arranging (same process we did before)
outidx = [idx(maskRow,:);idx(~maskRow,:)];
outidx = [outidx(:,maskCol),outidx(:,~maskCol)]
Output:
outidx =
2 17 7 12 22
4 19 9 14 24
1 16 6 11 21
3 18 8 13 23
5 20 10 15 25
Method 2
For Generic case, if you don't know the matrix beforehand, here is the procedure to find the maskRow and maskCol
Logic used:
Take first row. Consider it as column mask (maskCol).
For 2nd row to last row, the following process are repeated.
Compare the current row with maskCol.
If any one value matches with the maskCol, then find the element
wise logical OR and update it as new maskCol
Repeat this process till the last row.
Same process for finding maskRow while the column are used for
iterations instead.
Code:
%// If you have a square matrix, you can combine both these loops into a single loop.
maskCol = A(1,:);
for ii = 2:size(A,1)
if sum(A(ii,:) & maskCol)>0
maskCol = maskCol | A(ii,:);
end
end
maskCol = ~maskCol;
maskRow = A(:,1);
for ii = 2:size(A,2)
if sum(A(:,ii) & maskRow)>0
maskRow = maskRow | A(:,ii);
end
end
Here is an example to try that:
%// Here I removed some 'ones' from first, last rows and columns.
%// Compare it with the original example.
A = [0 0 1 0 1
0 0 0 1 0
0 1 1 0 0
1 0 0 1 0
0 1 0 0 1];
Then, repeat the procedure you followed before:
out = [A(maskRow,:);A(~maskRow,:)]; %// same code used
out = [out(:,maskCol),out(:,~maskCol)]; %// same code used
Here is the result:
>> out
out =
0 1 0 0 0
1 1 0 0 0
0 0 0 1 1
0 0 1 1 0
0 0 1 0 1
Note: This approach may work for most of the cases but still may fail for some rare cases.
Here, is an example:
%// this works well.
A = [0 0 1 0 1 0
1 0 0 1 0 0
0 1 0 0 0 1
1 0 0 1 0 0
0 0 1 0 1 0
0 1 0 0 1 1];
%// This may not
%// Second col, last row changed to zero from one
A = [0 0 1 0 1 0
1 0 0 1 0 0
0 1 0 0 0 1
1 0 0 1 0 0
0 0 1 0 1 0
0 0 0 0 1 1];
Why does it fail?
As we loop through each row (to find the column mask), for eg, when we move to 3rd row, none of the cols match the first row (current maskCol). So the only information carried by 3rd row (2nd element) is lost.
This may be the rare case because some other row might still contain the same information. See the first example. There also none of the elements of third row matches with 1st row but since the last row has the same information (1 at the 2nd element), it gave correct results. Only in rare cases, similar to this might happen. Still it is good to know this disadvantage.
Method 3
This one is Brute-force Alternative. Could be applied if you think the previous case might fail. Here, we use while loop to run the previous code (finding row and col mask) number of times with updated maskCol, so that it finds the correct mask.
Procedure:
maskCol = A(1,:);
count = 1;
while(count<3)
for ii = 2:size(A,1)
if sum(A(ii,:) & maskCol)>0
maskCol = maskCol | A(ii,:);
end
end
count = count+1;
end
Previous example is taken (where the previous method fails) and is run with and without while-loop
Without Brute force:
>> out
out =
1 0 1 0 0 0
1 0 1 0 0 0
0 0 0 1 1 0
0 1 0 0 0 1
0 0 0 1 1 0
0 0 0 0 1 1
With Brute-Forcing while loop:
>> out
out =
1 1 0 0 0 0
1 1 0 0 0 0
0 0 0 1 1 0
0 0 1 0 0 1
0 0 0 1 1 0
0 0 0 0 1 1
The number of iterations required to get the correct results may vary. But it is safe to have a good number.
Good Luck!

Finding minimum number of presses to shut down lamps

I tried to solve a programming problem but my I was unable to see an efficient algorithm. Situation is like this: We have a set of n lamps which can be on (1) or off (0) like this: 1110001011101. That byte string means that there are 13 lamps forming a circle where first three lamps are on, then 3 next off and so on and circle mean that the last lamp is next to the first one.
Then we have been given an integer m>0. It means that in any turn we can choose a lamp and then it and its m adjacent lamps changes their state s to 1-s. I.e. if m=2 and lamp states are 1110001011101 then applying the process to the first lamp we get the sequence 0000001011110.
Now the question is that if the string of length about 2200 and m about 110 are fixed, how one can develop an algorithm that shut downs all the lamps with minimum number of turns?
This problem is similar to the well-known "lights out" problem. http://en.wikipedia.org/wiki/Lights_Out_%28game%29 One way to approach it is by using linear algebra. It's easier to understand with smaller numbers, say length = 5 and m = 1.
First note that choosing a lamp and changing it (and its neighbors') state twice has no effect. Second note that the order in which lamps (and their neighbors) are switch doesn't matter. So a strategy is just a set of lamps. We'll represent lamps that are chosen to be part of the strategy by 1 and lamps that are not chosen by 0. We place the 1's and 0's in a column vector, e.g., (0 1 1 0 1)^T where T is for transpose (rows become columns). That strategy means toggle the lamp in position 1 (starting at position 0, of course) and its two neighbors; then the lamp in position 2 and its two neighbors, and finally the lamp in position 4 and its two neighbors.
The effect of a strategy can be calculated by matrix multiplication over the field GF(2). GF(2) has just 2 elements, 0 and 1, with ordinary rules of arithmetic except for the rule 1 + 1 = 0. Then the effect of the strategy above is the result of matrix multiplication by a matrix with the result of choosing lamp i in the i-th column, in other words by a "circulant matrix` as follows:
[ 1 1 0 0 1 ] [0] [0]
[ 1 1 1 0 0 ] [1] [0]
[ 0 1 1 1 0 ] [1] = [0]
[ 0 0 1 1 1 ] [0] [0]
[ 1 0 0 1 1 ] [1] [1]
The result of the strategy (0 1 1 0 1)^T is to toggle only the light in the last position. So if you start with only the light in the last position lit, and apply the strategy, all the lights will be off.
In this simple case, we represent the initial configuration by a column vector b. The solution strategy is then a column vector x satisfying the matrix equation Ax = b.
The question now becomes, for given b, 1) is there an x satisfying Ax=b? 2) Is the solution x unique? If not, which x has the least 1's? 3) How can it be calculated?
The answers to the above questions will depend on the numbers "length" and "m" for the particular problem at hand. In the length = 5, m = 1 problem considered above, the theory of linear algebra tells us that there is a unique solution for any b. We can get solutions for b of the form (0 0 ... 1 ... 0)^T, in other words one 1 and the rest zero, by "rotating" the solution (0 1 1 0 1)^T. We can represent any solution uniquely as a linear combination of those solutions, so the strategy/solution with the minimum number of 1's is the same as the unique solution for any given initial state.
On the other hand, with length = 6 and m = 1, all three strategies (100100)^T, (010010)^T, and (001001)^T map to outcome (111111)^T, so that there is not a unique solution in some cases; by the theory of linear algebra, it follows that there is no solution in some other cases.
In general, we can tell whether solutions exist and are unique using Gaussian elimination. In the 5x5 case above, add row 0 to rows 1 and 4;
[ 1 1 0 0 1 ] [1 0 0 0 0] [ 1 1 0 0 1 ] [1 0 0 0 0]
[ 1 1 1 0 0 ] [0 1 0 0 0] [ 0 0 1 0 1 ] [1 1 0 0 0]
[ 0 1 1 1 0 ] [0 0 1 0 0] -> [ 0 1 1 1 0 ] [0 0 1 0 0] ->
[ 0 0 1 1 1 ] [0 0 0 1 0] [ 0 0 1 1 1 ] [0 0 0 1 0]
[ 1 0 0 1 1 ] [0 0 0 0 1] [ 0 1 0 1 0 ] [1 0 0 0 1]
then swap rows 1 and 2; then add row 1 to row 0 and row 4,
[ 1 1 0 0 1 ] [1 0 0 0 0] [ 1 0 1 1 1 ] [1 0 1 0 0]
[ 0 1 1 1 0 ] [0 0 1 0 0] [ 0 1 1 1 0 ] [0 0 1 0 0]
[ 0 0 1 0 1 ] [1 1 0 0 0] -> [ 0 0 1 0 1 ] [1 1 0 0 0] ->
[ 0 0 1 1 1 ] [0 0 0 1 0] [ 0 0 1 1 1 ] [0 0 0 1 0]
[ 0 1 0 1 0 ] [1 0 0 0 1] [ 0 0 1 0 0 ] [1 0 1 0 1]
then add row 2 to rows 0, 1, 3, 4; then add row 3 to rows 1, 2;
[ 1 0 0 1 0 ] [0 1 1 0 0] [ 1 0 0 0 0 ] [1 0 1 1 0]
[ 0 1 0 1 1 ] [1 1 1 0 0] [ 0 1 0 0 1 ] [0 0 1 1 0]
[ 0 0 1 0 1 ] [1 1 0 0 0] -> [ 0 0 1 0 1 ] [1 1 0 0 0] ->
[ 0 0 0 1 0 ] [1 1 0 1 0] [ 0 0 0 1 0 ] [1 1 0 1 0]
[ 0 0 0 0 1 ] [0 1 1 0 1] [ 0 0 0 0 1 ] [0 1 1 0 1]
and finally add row 4 to rows 1, 2:
[ 1 0 0 0 0 ] [1 0 1 1 0]
[ 0 1 0 0 0 ] [0 1 0 1 1]
[ 0 0 1 0 0 ] [1 0 1 0 1]
[ 0 0 0 1 0 ] [1 1 0 1 0]
[ 0 0 0 0 1 ] [0 1 1 0 1]
You can read off the basis of solutions in the columns of the right matrix. For example, the solution we used above is in the last column of the right matrix.
You should try Gaussian elimination in the length = 6, m = 1 case discussed above to see what happens.
In the given case (length = 2200, m = 110), I suspect that solutions always exist and are unique because the number of lamps toggled in one move is 221, which is relatively prime to 2200, but I suggest you use Gaussian elimination to find an explicit strategy for any starting position b. How would you minimize the number of moves if there were not a unique strategy?
There's a general solution to flipping problems like this using linear algebra over Z/2Z (that is the field containing only the numbers 0 and 1).
Suppose there's N bulbs and N switches. Let M be an N by N matrix with a 1 in position i, j if pressing switch i toggles bulb j. Here your matrix will look like this for N=5, m=1:
1, 1, 0, 0, 1
1, 1, 1, 0, 0
0, 1, 1, 1, 0
0, 0, 1, 1, 1
1, 0, 0, 1, 1
Let x be a column vector of size N, where each entry is 0 or 1.
Then Mx (that is, the product of the matrix M and the vector x over Z/2Z) is a column vector of size N which is the result of pressing the switches corresponding to 1s in x. That's because in Z/2Z, multiplication is like "and" and addition is like "xor".
Let v be a column vector of size N, with v_i=1 if bulb i is initially lit. Then x solves the problem if it's a solution to the linear system Mx = v. It can be solved, for example, using gaussian elimination.
Well, your explanation doesn't make it clear if the lamps should be only turned off or "flipped" (i.e., 0's become 1's and 1's become 0's). Your example data just turns them off.
If that's the case, just set the 110 lamps to 0 - that would be quicker than querying their state before switching them off. Assuming your lamps are in an array called "lamps" and the starting lamp position is startPos:
// These first 2 lines added after Kolmar remark about adjacent lamps meaning lamps to the left and right.
startPos = startPos - m;
if (startPos < 0) startPos += lamps.length;
for (int i=0; i <= m + 1; i++){
if ((i + startPos) > lamps.length) startPos = 0;
lamps[i + startPos] = 0;
}
If you need to "flip" the lamp's state, change the last line of the loop to:
lamps[i + startPos] = 1-lamps[i + startPos];

Fast Connected Component Identification in Undirected Graphs in R

Given a node x in an undirected graph that is known to be part of a connected component, I seek to find all nodes belonging to the component of x.
My current implementation identifies all components in the undirected graph and is therefore inneficient for large graphs. I currently use connectedComp from ggm library to do this, but would rather run a BFS from RBGL starting at node x and terminating once its component is fully explored. Any suggestions on how to do this? Also, any information on parallel graph algorithm implementations that can be called from R would be appreciated.
library("ggm")
x <- 2
> graph
1 2 3 4 5 6 7 8 9 10
1 0 0 0 0 0 0 0 0 0 0
2 0 0 1 0 0 1 0 0 0 0
3 0 1 0 0 0 1 1 1 0 0
4 0 0 0 0 0 0 0 0 0 0
5 0 0 0 0 0 0 0 0 0 0
6 0 1 1 0 0 0 0 0 0 0
7 0 0 1 0 0 0 0 0 0 0
8 0 0 1 0 0 0 0 0 0 0
9 0 0 0 0 0 0 0 0 0 0
10 0 0 0 0 0 0 0 0 0 0
graph_object <- as(graph, "graphNEL")
# All connected components of graph using connectedComp function:
comp_list <- connectedComp(graph_object)
> comp_list
$`1`
[1] "1"
$`2`
[1] "2" "3" "6" "7" "8"
$`3`
[1] "4"
$`4`
[1] "5"
$`5`
[1] "9"
$`6`
[1] "10"
# Extract adjacency matrix of component containing x:
comp_x <- seq_along(comp_list)[sapply(comp_list, FUN=function(list) x %in% list)]
> comp_x
[1] 2
comp_x_list <- comp_list[[comp_x]]
> comp_x_list
[1] "2" "3" "6" "7" "8"
comp_x <- graph[comp_x_list, comp_x_list]
> comp_x
2 3 6 7 8
2 0 1 1 0 0
3 1 0 1 1 1
6 1 1 0 0 0
7 0 1 0 0 0
8 0 1 0 0 0
In my opinion preprocessing graph with Union-find will give you best results.
It would be faster if you store graph as list of edges instead of adjacency matrix.
If you need parallel solution, then you should read about bfs in hadoop

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