I'm trying to download multiple files in parallel using xargs. Things worked so well if I only download the file without given name. echo ${links[#]} | xargs -P 8 -n 1 wget. Is there any way that allow me to download with filename like wget -O [filename] [URL] but in parallel?
Below is my work. Thank you.
links=(
"https://apod.nasa.gov/apod/image/1901/sombrero_spitzer_3000.jpg"
"https://apod.nasa.gov/apod/image/1901/orionred_WISEantonucci_1824.jpg"
"https://apod.nasa.gov/apod/image/1901/20190102UltimaThule-pr.png"
"https://apod.nasa.gov/apod/image/1901/UT-blink_3d_a.gif"
"https://apod.nasa.gov/apod/image/1901/Jan3yutu2CNSA.jpg"
)
names=(
"file1.jpg"
"file2.jpg"
"file3.jpg"
"file4.jpg"
"file5.jpg"
)
echo ${links[#]} ${names[#]} | xargs -P 8 -n 1 wget
With GNU Parallel you can do:
parallel wget -O {2} {1} ::: "${links[#]}" :::+ "${names[#]}"
If a download fails, GNU Parallel can also retry commands with --retry 3.
Related
I'm using ncftpput to upload images to a ftp server.
An example of the script is
# destination. origin
ncftpput -R ftp_server icon_d2/cape_cin ./cape_cin_*.png
ncftpput -R ftp_server icon_d2/t_v_pres ./t_v_pres_*.png
ncftpput -R ftp_server icon_d2/it/cape_cin ./it/cape_cin_*.png
ncftpput -R ftp_server icon_d2/it/t_v_pres ./it/t_v_pres_*.png
I'm trying to parallelize this with GNU parallel but I'm struggling to pass the arguments to ncftpput. I know what I'm doing wrong but somehow can not find the solution.
If I construct the array of what I need to upload
images_output=("cape_cin" "t_v_pres")
# suffix for naming
projections_output=("" "it/")
# remote folder on server
projections_output_folder=("icon_d2" "icon_d2/it")
# Create a list of all the images to upload
upload_elements=()
for i in "${!projections_output[#]}"; do
for j in "${images_output[#]}"; do
upload_elements+=("${projections_output_folder[$i]}/${j} ./${projections_output[$i]}${j}_*.png")
done
done
Then I can do the upload in serial like this
for k in "${upload_elements[#]}"; do
ncftpput -R ftp_server ${k}
done
When using parallel I'm using colsep to separate the arguments
parallel -j 5 --colsep ' ' ncftpput -R ftp_server ::: "${upload_elements[#]}"
but ncftpput gives an error that tells me it is not understanding the structure of the passed argument.
What am I doing wrong?
Try:
parallel -j 5 --colsep ' ' eval ncftpput -R ftp_server ::: "${upload_elements[#]}"
This should do exactly the same:
for k in "${upload_elements[#]}"; do
echo ncftpput -R ftp_server ${k}
done | parallel -j 5
I want to check some file on the remote website.
Here is bash command to generate commands that calculate the file md5
[root]# head -n 3 zrcpathAll | awk '{print $3}' | xargs -I {} echo wget -q -O - -i {}e \| md5sum\;
wget -q -O - -i https://example.com/zrc/3d2f0e76e04444f4ec456ef9f11289ec.zrce | md5sum;
wget -q -O - -i https://example.com/zrc/e1bd7171263adb95fb6f732864ceb556.zrce | md5sum;
wget -q -O - -i https://example.com/zrc/5300b80d194f677226c4dc6e17ba3b85.zrce | md5sum;
Then I pipe the outputed commands to bash, but only the first command was executed.
[root]# head -n 3 zrcpathAll | awk '{print $3}' | xargs -I {} echo wget -q -O - -i {}e \| md5sum\; | bash -v
wget -q -O - -i https://example.com/zrc/3d2f0e76e04444f4ec456ef9f11289ec.zrce | md5sum;
3d2f0e76e04444f4ec456ef9f11289ec -
[root]#
Would you please try the following instead:
while read -r _ _ url _; do
wget -q -O - "$url"e | md5sum
done < <(head -n 3 zrcpathAll)
we should not put -i in front of "$url" here.
[Explanation about -i option]
Manpage of wget says:
-i file
--input-file=file
Read URLs from a local or external file. [snip]
If this function is used, no URLs need be present on the command line. [snip]
If the file is an external one, the document will be automatically treated as html if the Content-Type matches text/html.
Furthermore, the file's location will be implicitly used as base
href if none was specified.
where the file will contain line(s) of url such as:
https://example.com/zrc/3d2f0e76e04444f4ec456ef9f11289ec.zrce
https://example.com/zrc/e1bd7171263adb95fb6f732864ceb556.zrce
https://example.com/zrc/5300b80d194f677226c4dc6e17ba3b85.zrce
Whereas if we use the option as -i url, wget first
downloads the url as a file which contains the lines of urls
as above. In our case, the url is the target to download itself,
not the list of urls, wget causes an error: No URLs found in url.
Even if the wget fails, why the command outputs just one line, not
three lines as the result of md5sum?
This seems to be because the head command immediately flushes the remaining
lines when the piped subprocess fails.
I am downloading files with this script:
parallel --progress -j16 -a ./temp/img-url.txt 'wget -nc -q -P ./images/ {}; wget -nc -q -P ./images/ {.}_{001..005}.jpg'
Would it be possible to not download files, just check them on the remote side and if exists create a dummy file instead of downloading?
Something like:
if wget --spider $url 2>/dev/null; then
#touch img.file
fi
should work, but I don't know how to combine this code with GNU Parallel.
Edit:
Based on Ole's answer I wrote this piece of code:
#!/bin/bash
do_url() {
url="$1"
wget -q -nc --method HEAD "$url" && touch ./images/${url##*/}
#get filename from $url
url2=${url##*/}
wget -q -nc --method HEAD ${url%.jpg}_{001..005}.jpg && touch ./images/${url2%.jpg}_{001..005}.jpg
}
export -f do_url
parallel --progress -a urls.txt do_url {}
It works, but it fails for some files. I can not find consistency why it works for some files, why it fails for others. Maybe it has something with the last filename. Second wget tries to access the currect url, but the touch command after that simply does not create the desidered file. First wget always (correctly) downloads the main image without the _001.jpg, _002.jpg.
Example urls.txt:
http://host.com/092401.jpg (works correctly, _001.jpg.._005.jpg are downloaded)
http://host.com/HT11019.jpg (not works, only the main image is downloaded)
It is pretty hard to understand what it is you really want to accomplish. Let me try to rephrase your question.
I have urls.txt containing:
http://example.com/dira/foo.jpg
http://example.com/dira/bar.jpg
http://example.com/dirb/foo.jpg
http://example.com/dirb/baz.jpg
http://example.org/dira/foo.jpg
On example.com these URLs exist:
http://example.com/dira/foo.jpg
http://example.com/dira/foo_001.jpg
http://example.com/dira/foo_003.jpg
http://example.com/dira/foo_005.jpg
http://example.com/dira/bar_000.jpg
http://example.com/dira/bar_002.jpg
http://example.com/dira/bar_004.jpg
http://example.com/dira/fubar.jpg
http://example.com/dirb/foo.jpg
http://example.com/dirb/baz.jpg
http://example.com/dirb/baz_001.jpg
http://example.com/dirb/baz_005.jpg
On example.org these URLs exist:
http://example.org/dira/foo_001.jpg
Given urls.txt I want to generate the combinations with _001.jpg .. _005.jpg in addition to the original URL. E.g.:
http://example.com/dira/foo.jpg
becomes:
http://example.com/dira/foo.jpg
http://example.com/dira/foo_001.jpg
http://example.com/dira/foo_002.jpg
http://example.com/dira/foo_003.jpg
http://example.com/dira/foo_004.jpg
http://example.com/dira/foo_005.jpg
Then I want to test if these URLs exist without downloading the file. As there are many URLs I want to do this in parallel.
If the URL exists I want an empty file created.
(Version 1): I want the empty file created in a the similar directory structure in the dir images. This is needed because some of the images have the same name, but in different dirs.
So the files created should be:
images/http:/example.com/dira/foo.jpg
images/http:/example.com/dira/foo_001.jpg
images/http:/example.com/dira/foo_003.jpg
images/http:/example.com/dira/foo_005.jpg
images/http:/example.com/dira/bar_000.jpg
images/http:/example.com/dira/bar_002.jpg
images/http:/example.com/dira/bar_004.jpg
images/http:/example.com/dirb/foo.jpg
images/http:/example.com/dirb/baz.jpg
images/http:/example.com/dirb/baz_001.jpg
images/http:/example.com/dirb/baz_005.jpg
images/http:/example.org/dira/foo_001.jpg
(Version 2): I want the empty file created in the dir images. This can be done because all the images have unique names.
So the files created should be:
images/foo.jpg
images/foo_001.jpg
images/foo_003.jpg
images/foo_005.jpg
images/bar_000.jpg
images/bar_002.jpg
images/bar_004.jpg
images/baz.jpg
images/baz_001.jpg
images/baz_005.jpg
(Version 3): I want the empty file created in the dir images called the name from urls.txt. This can be done because only one of _001.jpg .. _005.jpg exists.
images/foo.jpg
images/bar.jpg
images/baz.jpg
#!/bin/bash
do_url() {
url="$1"
# Version 1:
# If you want to keep the folder structure from the server (similar to wget -m):
wget -q --method HEAD "$url" && mkdir -p images/"$2" && touch images/"$url"
# Version 2:
# If all the images have unique names and you want all images in a single dir
wget -q --method HEAD "$url" && touch images/"$3"
# Version 3:
# If all the images have unique names when _###.jpg is removed and you want all images in a single dir
wget -q --method HEAD "$url" && touch images/"$4"
}
export -f do_url
parallel do_url {1.}{2} {1//} {1/.}{2} {1/} :::: urls.txt ::: .jpg _{001..005}.jpg
GNU Parallel takes a few ms per job. When your jobs are this short, the overhead will affect the timing. If none of your CPU cores are running at 100% you can run more jobs in parallel:
parallel -j0 do_url {1.}{2} {1//} {1/.}{2} {1/} :::: urls.txt ::: .jpg _{001..005}.jpg
You can also "unroll" the loop. This will save 5 overheads per URL:
do_url() {
url="$1"
# Version 2:
# If all the images have unique names and you want all images in a single dir
wget -q --method HEAD "$url".jpg && touch images/"$url".jpg
wget -q --method HEAD "$url"_001.jpg && touch images/"$url"_001.jpg
wget -q --method HEAD "$url"_002.jpg && touch images/"$url"_002.jpg
wget -q --method HEAD "$url"_003.jpg && touch images/"$url"_003.jpg
wget -q --method HEAD "$url"_004.jpg && touch images/"$url"_004.jpg
wget -q --method HEAD "$url"_005.jpg && touch images/"$url"_005.jpg
}
export -f do_url
parallel -j0 do_url {.} :::: urls.txt
Finally you can run more than 250 jobs: https://www.gnu.org/software/parallel/man.html#EXAMPLE:-Running-more-than-250-jobs-workaround
You may use curl instead to check if the URLs you are parsing are there without downloading any file as such:
if curl --head --fail --silent "$url" >/dev/null; then
touch .images/"${url##*/}"
fi
Explanation:
--fail will make the exit status nonzero on a failed request.
--head will avoid downloading the file contents
--silent will avoid status or errors from being emitted by the check itself.
To solve the "looping" issue, you can do:
urls=( "${url%.jpg}"_{001..005}.jpg )
for url in "${urls[#]}"; do
if curl --head --silent --fail "$url" > /dev/null; then
touch .images/${url##*/}
fi
done
From what I can see, your question isn't really about how to use wget to test for the existence of a file, but rather on how to perform correct looping in a shell script.
Here is a simple solution for that:
urls=( "${url%.jpg}"_{001..005}.jpg )
for url in "${urls[#]}"; do
if wget -q --method=HEAD "$url"; then
touch .images/${url##*/}
fi
done
What this does is that it invokes Wget with the --method=HEAD option. With the HEAD request, the server will simply report back whether the file exists or not, without returning any data.
Of course, with a large data set this is pretty inefficient. You're creating a new connection to the server for every file you're trying. Instead, as suggested in the other answer, you could use GNU Wget2. With wget2, you can test all of these in parallel, and use the new --stats-server option to find a list of all the files and the specific return code that the server provided. For example:
$ wget2 --spider --progress=none -q --stats-site example.com/{,1,2,3}
Site Statistics:
http://example.com:
Status No. of docs
404 3
http://example.com/3 0 bytes (identity) : 0 bytes (decompressed), 238ms (transfer) : 238ms (response)
http://example.com/1 0 bytes (gzip) : 0 bytes (decompressed), 241ms (transfer) : 241ms (response)
http://example.com/2 0 bytes (identity) : 0 bytes (decompressed), 238ms (transfer) : 238ms (response)
200 1
http://example.com/ 0 bytes (identity) : 0 bytes (decompressed), 231ms (transfer) : 231ms (response)
You can even get this data printed as a CSV or JSON for easier parsing
Just loop over the names?
for uname in ${url%.jpg}_{001..005}.jpg
do
if wget --spider $uname 2>/dev/null; then
touch ./images/${uname##*/}
fi
done
You could send a command via ssh to see if the remote file exists and cat it if it does:
ssh your_host 'test -e "somefile" && cat "somefile"' > somefile
Could also try scp which supports glob expressions and recursion.
I am trying to extract URLS from a webpage using wget. I tried this
wget -r -l2 --reject=gif -O out.html www.google.com | sed -n 's/.*href="\([^"]*\).*/\1/p'
It is displaiyng FINISHED
Downloaded: 18,472 bytes in 1 files
But not displaying the weblinks. If I try to do it seperately
wget -r -l2 --reject=gif -O out.html www.google.com
sed -n 's/.*href="\([^"]*\).*/\1/p' < out.html
Output
http://www.google.com/intl/en/options/
/intl/en/policies/terms/
It is not displaying all the links
ttp://www.google.com
http://maps.google.com
https://play.google.com
http://www.youtube.com
http://news.google.com
https://mail.google.com
https://drive.google.com
http://www.google.com
http://www.google.com
http://www.google.com
https://www.google.com
https://plus.google.com
And more over I want to get links from 2nd level and more can any one give a solution for this
Thanks in advance
The -O file option captures the output of wget and writes it to the specified file, so there is no output going through the pipe to sed.
You can say -O - to direct wget output to standard output.
If you don't want to use grep, you can try
sed -n "/href/ s/.*href=['\"]\([^'\"]*\)['\"].*/\1/gp"
So I have the equivalent of a list of files being output by another command, and it looks something like this:
http://somewhere.com/foo1.xml.gz
http://somewhere.com/foo2.xml.gz
...
I need to run the XML in each file through xmlstarlet, so I'm doing ... | xargs gzip -d | xmlstarlet ..., except I want xmlstarlet to be called once for each line going into gzip, not on all of the xml documents appended to each other. Is it possible to compose 'gzip -d' 'xmlstarlet ...', so that xargs will supply one argument to each of their composite functions?
Why not read your file and process each line separately in the shell? i.e.
fileList=/path/to/my/xmlFileList.txt
cat ${fileList} \
| while read fName ; do
gzip -d ${fName} | xmlstartlet > ${fName}.new
done
I hope this helps.
Although the right answer is the one suggested by shelter (+1), here is a one-liner "divertimento" providing that the input is the proposed by Andrey (a command that generates the list of urls) :-)
~$ eval $(command | awk '{a=a "wget -O - "$0" | gzip -d | xmlstartlet > $(basename "$0" .gz ).new; " } END {print a}')
It just generates a multi command line that does wget http://foo.xml.gz | gzip -d | xmlstartlet > $(basenname foo.xml.gz .gz).new for each of the urls in the input; after the resulting command is evaluated
Use GNU Parallel:
cat filelist | parallel 'zcat {} | xmlstarlet >{.}.out'
or if you want to include the fetching of urls:
cat urls | parallel 'wget -O - {} | zcat | xmlstarlet >{.}.out'
It is easy to read and you get the added benefit of having on job per CPU run in parallel. Watch the intro video to learn more: http://www.youtube.com/watch?v=OpaiGYxkSuQ
If xmlstarlet can operate on stdin instead of having to pass it a filename, then:
some command | xargs -i -n1 sh -c 'zcat "{}" | xmlstarlet options ...'
The xargs option -i means you can use the "{}" placeholder to indicate where the filename should go. Use -n 1 to indicate xargs should only one line at a time from its input.