How do I get CMake to find OpenMP_C, OpenMP_CXX, etc.? - macos

I am fairly new to working with the terminal and I am attempting to use cmake to configure a build for a project that involves public transportation routes. When I attempt to make the build I get the following response in the terminal:
$ cmake ..
-- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES)
-- Could NOT find OpenMP_CXX (missing: OpenMP_CXX_FLAGS OpenMP_CXX_LIB_NAMES)
-- Could NOT find OpenMP (missing: OpenMP_C_FOUND OpenMP_CXX_FOUND)
CMake Warning at CMakeLists.txt:33 (message):
Configuring without OpenMP!
CMake Error at src/CMakeLists.txt:13 (add_subdirectory):
The source directory
/Users/ericbush/Desktop/the-one/toolkit/gtfs/pfaedle/src/cppgtfs
does not contain a CMakeLists.txt file.
CMake Error at src/CMakeLists.txt:14 (add_subdirectory):
The source directory
/Users/ericbush/Desktop/the-one/toolkit/gtfs/pfaedle/src/configparser
does not contain a CMakeLists.txt file.
-- Configuring incomplete, errors occurred!
See also "/Users/ericbush/Desktop/the-one/toolkit/gtfs/pfaedle/build/CMakeFiles/CMakeOutput.log".
See also "/Users/ericbush/Desktop/the-one/toolkit/gtfs/pfaedle/build/CMakeFiles/CMakeError.log".
Below is what I believe to be the relevant code from the CMakeLists.txt file:
find_package(OpenMP)
if (OPENMP_FOUND)
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}")
endif()
# set compiler flags, see http://stackoverflow.com/questions/7724569/debug-vs-release-in-cmake
if(OPENMP_FOUND)
set(CMAKE_CXX_FLAGS "-fopenmp -Ofast -fno-signed-zeros -fno-trapping-math -Wall -Wno-format-extra-args -Wextra -Wformat-nonliteral -Wformat-security -Wformat=2 -Wextra -Wno-implicit-fallthrough -pedantic")
else()
message(WARNING "Configuring without OpenMP!")
set(CMAKE_CXX_FLAGS "-Ofast -fno-signed-zeros -fno-trapping-math -Wall -Wno-format-extra-args -Wextra -Wformat-nonliteral -Wformat-security -Wformat=2 -Wextra -Wno-implicit-fallthrough -pedantic")
endif()
set(CMAKE_CXX_FLAGS_DEBUG "-Og -g -DLOGLEVEL=3 -DPFAEDLE_DBG=1")
set(CMAKE_CXX_FLAGS_MINSIZEREL "${CMAKE_CXX_FLAGS} -DLOGLEVEL=2")
set(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS} -DLOGLEVEL=2")
set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "${CMAKE_CXX_FLAGS} -g -DLOGLEVEL=3")
I have found some similar questions on this and other websites, but I am still struggling to understand the problem because I have never used cmake before and, as mentioned, I am somewhat new to working with the terminal. I would be extremely grateful for any information on what the error messages are actually telling me, or any suggestions on steps I could take/things I could try to solve the issue. I am working on a Mac, if anyone is wondering.

For the compiler to see OpenMP, you may need to set the following options in your cmake command (for dependencies located in /opt/local):
cmake .. \
-DOpenMP_C_FLAGS=-fopenmp=lomp \
-DOpenMP_CXX_FLAGS=-fopenmp=lomp \
-DOpenMP_C_LIB_NAMES="libomp" \
-DOpenMP_CXX_LIB_NAMES="libomp" \
-DOpenMP_libomp_LIBRARY="/opt/local/lib/libomp.dylib" \
-DOpenMP_CXX_FLAGS="-Xpreprocessor -fopenmp /opt/local/lib/libomp.dylib -I/opt/local/include" \
-DOpenMP_CXX_LIB_NAMES="libomp" \
-DOpenMP_C_FLAGS="-Xpreprocessor -fopenmp /opt/local/lib/libomp.dylib -I/opt/local/include"
The two missing CMakeLists.txt are located in git submodules within src/ To download the submodules, cd to the root phaedle directory and issue the following command:
git submodule update --init --recursive
Edit: this is now fixed in master.

Related

Why is CMake putting "std=gnu++14" in Clang invocations when I don't specify GCC?

I have a pretty simple CMake-based project that builds one lib and a small executable that uses it. It builds fine on Linux with GCC, but fails on Mac OS with loads of errors of the following kind. The inciting line of code in main.cpp is the second one here:
#include <cstdlib>
#include <memory>
The first of many similar errors:
[build] In file included from /Users/me/data/series2server/main.cpp:2:
[build] In file included from /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk/usr/include/c++/v1/memory:671:
[build] /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk/usr/include/c++/v1/__algorithm/search.h:34:19: error: no member named 'make_pair' in namespace 'std::__1'
[build] return _VSTD::make_pair(__first1, __first1); // Everything matches an empty sequence
This appears to be a mismatch between Clang and GCC uses of std. But I can't figure out why CMake is configuring things to call clang++ but putting "std=gnu++14" in the compiler invocation. I did a full-text search for "std=gnu" in the whole source tree and didn't find it. I do see this in various CMakeLists.txt files:
set( CMAKE_CXX_STANDARD 14 )
A compiler invocation is below. Where might I look for where this gnu option is specified? Thanks!
[build] cd /Users/me/data/series2server/build/restbed && /usr/bin/clang++ -DBUILD_SSL -I/Users/me/data/series2server/restbed/source -isystem /Users/me/data/series2server/restbed/dependency/asio/asio/include -isystem /Users/me/data/series2server/restbed/dependency/openssl/include -Wall -Wextra -Weffc++ -pedantic -Wno-unknown-pragmas -Wno-deprecated-declarations -Wno-non-virtual-dtor -DASIO_STANDALONE=YES -Wno-deprecated-declarations -g -arch arm64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk -std=gnu++14 -MD -MT restbed/CMakeFiles/restbed-static.dir/source/corvusoft/restbed/detail/service_impl.cpp.o -MF CMakeFiles/restbed-static.dir/source/corvusoft/restbed/detail/service_impl.cpp.o.d -o CMakeFiles/restbed-static.dir/source/corvusoft/restbed/detail/service_impl.cpp.o -c /Users/me/data/series2server/restbed/source/corvusoft/restbed/detail/service_impl.cpp
From n.m.'s comment 10 years ago, for clarity:
set( CMAKE_CXX_STANDARD 14 ) sets gcc or clang flag to -std=gnu++14, unless CXX_EXTENSIONS property (or CMAKE_CXX_EXTENSIONS variable) is set to OFF.

Compiler Error when Compiling GCC 5.3.0 (-Lyes/lib and -Iyes/include)

When attempting to compile GNU GCC 5.3.0 I encounter the following error when it tries to build libjavamath.la.
/bin/bash ../../../libtool --tag=CC --mode=link /home/borish/Downloads/gcc-build/./gcc/xgcc -B/home/borish/Downloads/gcc-build/./gcc/ -B/usr/local/x86_64-unknown-linux-gnu/bin/ -B/usr/local/x86_64-unknown-linux-gnu/lib/ -isystem /usr/local/x86_64-unknown-linux-gnu/include -isystem /usr/local/x86_64-unknown-linux-gnu/sys-include -W -Wall -Wmissing-declarations -Wwrite-strings -Wmissing-prototypes -Wno-long-long -Iyes/include -g -O2 -module -version-info 0:0:0 -no-undefined -Lyes/lib -lgmp -avoid-version -o libjavamath.la -rpath /usr/local/lib/../lib64/gcj-5.3.0-16 gnu_java_math_GMP.lo ../../../native/jni/classpath/jcl.lo
../../../libtool: line 5209: cd: yes/lib: No such file or directory
libtool: link: cannot determine absolute directory name of `yes/lib'
Makefile:403: recipe for target 'libjavamath.la' failed
This is on a Debian 8.4 system with GCC 4.9.2-10 installed. I believe I have satisfied all of the prerequisites, and Google wasn't been much help.
Any thoughts?
Update:
I used the following for running the configuration script:
../gcc-5.3.0/configure --disable-multilib --with-mpc --with-isl --with-mpfr --with-gmp
It sounds like you didn't run "configure" correctly. For example:
https://software.ecmwf.int/issues/browse/SUP-676
OK, I see a problem already, the "--with-jasper" option must point the
to the prefix of the "jasper" installation, for example
$./configure --with-jasper=/usr/local/jasper --with-png-support.
Otherwise the value "yes" is set as prefix..
For example, if you look here:
http://www.gnu.org/software/libc/manual/html_node/Configuring-and-compiling.html
you'll see that a flag like ‘--with-headers=directory’ REQUIRES YOU TO ENTER A DIRECTORY PATH. I suspect the same thing is happening with your "-with-mpc" etc.
SUGGESTION: clean your build directory, and (carefully!) re-run ./configure.
The culprit appears to be the --with-gmp, --with-mpc and --with-mpfr switches when initiating the configure script. I suspect since libgmp is a prerequisite for libmpc and libmpfr, a bug feature in the configure script will include the offending -I and -L directives. Inclusion of any of them will result in the following in the root Makefile
HOST_GMPLIBS = -Lyes/lib -lmpc -lmpfr -lgmp
HOST_GMPINC = -Iyes/include
I haven't confirmed this to be the case in any of the other Makefiles, but I suspect something similar is going on elsewhere which is what I ran into when it attempted to building libjavamath.la.
The work around is to omit those switches from the configure invocation. They should be included in any event since the configure script will fail if they aren't present on the host.

Build Android NDK project with Cmake

I would like to generate my android native application with the android NDK and Cmake, so, I've downloaded the android-cmake toolchain.
Cmake generate my project successfully, but when I try to go in the generate directory and try to run "make", I've got the following error:
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/ldz/Desktop/myProject
[ 1%] Building CXX object Project/src/Main/Core/CMakeFiles/Core.dir/Main/Main.cpp.o
arm-linux-androideabi-g++: error: unrecognized command line option '-stdlib=libc++'
I don't know what is wrong here, my project use C++11, here is my g++ --version result:
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 5.0 (clang-500.2.76) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin12.5.0
Thread model: posix
Thanks!
To build an Android NDK project with Cmake and create APK, you should do :
Instead of using android-cmake, you should use the fork from taka-no-me.
Then use Apk.cmake from pixellight. Copy also [AndroidManifest.xml.in, LoadLibraries.java.in, strings.xml.in] from this repo.
Have a CMakeLists.txt like this :
cmake_minimum_required(VERSION 2.8.3)
project(testBuilder)
include("Apk.cmake" REQUIRED)
include_directories(${ANDROID_NDK}/sources/android/native_app_glue)
set(TEST_SRC
${ANDROID_NDK}/sources/android/native_app_glue/android_native_app_glue.c
src/Main.cpp
)
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++0x -ffor-scope -fno-rtti -fno-exceptions -pipe -ffunction-sections -fdata-sections -ffast-math -Wnon-virtual-dtor -Wreorder -Wsign-promo -fvisibility=hidden -fvisibility-inlines-hidden -Wstrict-null-sentinel -Os -funroll-all-loops -fpeel-loops -ftree-vectorize")
set(LINKER_FLAGS "${LINKER_FLAGS} -Wl,--as-needed -Wl,--gc-sections -Wl,--no-undefined -Wl,--strip-all -Wl,-rpath-link=${ANDROID_NDK_SYSROOT}/usr/lib/ -L${ANDROID_NDK_SYSROOT}/usr/lib/")
add_library(test SHARED ${TEST_SRC})
target_link_libraries(test log android)
set_target_properties(test PROPERTIES COMPILE_DEFINITIONS "ANDROID")
set(APP_SHARED_LIBRARIES ${LIBRARY_OUTPUT_PATH}/libtest.so)
android_create_apk(test "${CMAKE_BINARY_DIR}/apk" "${APP_SHARED_LIBRARIES}" "" "Data")
This is Main.cpp
#include <android_native_app_glue.h>
#include <android/log.h>
#define APPNAME "TestApp"
void android_main(struct android_app* state)
{
app_dummy(); // Make sure glue isn't stripped
__android_log_print(ANDROID_LOG_INFO, APPNAME, "HolyShit you did it !");
ANativeActivity_finish(state->activity);
}
Based on Vi.:s answer I did a clone of android-cmake on github and added a modified Apk.cmake called android.apk.cmake. I use NativeActivity instead of pixellight:s LoadLibraries.java.
The clone is here:
https://github.com/Discordia/android-cmake
I created the example in Vi.:s answer:
https://github.com/Discordia/android-cmake-example

Qt creator -1: error: [CMakeFiles/yahtzee.dir/gamecontroller.cpp.o] Error 1 : File not found

I am using Qt creator 2.5 with CMake (2.8.7) and gcc 4.6.3 and lately I have encountered this strange error :
:-1: error: [CMakeFiles/yahtzee.dir/gamecontroller.cpp.o] Error 1
File not found
What can I do about it ? CMake is not generating this gamecontroller.cpp.o
this is my CMakeLists.txt file
project(cpp_workshop)
cmake_minimum_required(VERSION 2.6)
# Set default compile flags for GCC
if(CMAKE_COMPILER_IS_GNUCXX)
message(STATUS "GCC detected, adding compile flags")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -pedantic -Wall -Wextra -Werror")
else()
message(STATUS "GCC not detected, probably running Windows")
endif(CMAKE_COMPILER_IS_GNUCXX)
#add_definitions("-Wall -Werror")
ADD_DEFINITIONS("-Wno-unused-parameter")
add_executable(yahtzee #name of the executable
gamecontroller.h gamecontroller.cpp
player.h player.cpp
game.h game.cpp
dice.h dice.cpp
strategy.cpp strategy.h
istrategy.h
game_rules.h
main singleton
)
And just to mention, all these files are located in directory and this is the 'build' directory that CMake creates :
CMakeCache.txt CMakeFiles cmake_install.cmake cpp_workshop.cbp Makefile
and the above CMakeFiles dir
CMakeCCompiler.cmake CMakeDirectoryInformation.cmake CompilerIdCXX TargetDirectories.txt
cmake.check_cache CMakeOutput.log Makefile2 yahtzee.dir
CMakeCXXCompiler.cmake CMakeSystem.cmake Makefile.cmake
CMakeDetermineCompilerABI_C.bin CMakeTmp Progress
CMakeDetermineCompilerABI_CXX.bin CompilerIdC progress.marks
Ok, the problem was with Cmake's argument passed to gcc
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11")
I changed that to
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++0x")
and now it works. Surprisingly, C++11 does not work with gcc yet ?

Compiling LLVM 2.9's gcc 4.2 on kernel 3.0 with gcc 4.6

I'm trying to get llvm-gcc 4.2.2.9 to compile on this x86_64 system which runs the 3.0.0-21-generic kernel. llvm 2.9 itself builds fine. I suspected the downloadable version of llvm-gcc was causing some other problems, so I decided to build llvm-gcc myself.
Like suggested in the README.LLVM I configured with
../llvm-gcc-4.2-2.9.source/configure \
--prefix=/opt/llvm-gcc4.2-2.9/../llvm-gcc4.2-2.9-install \
--disable-multilib \
--program-prefix=llvm- \
--enable-llvm=/opt/llvm-2.9 \
--host=x86_64-generic-linux-gnu
--enable-languages=c,c++
I'm running this from the /opt/llvm-gcc4.2-2.9 directory, while the sources are sitting in /opt/llvm-gcc-4.2-2.9.source and my llvm 2.9 lives in /opt/llvm-2.9. Note that I'm setting the --host instead of the --target as this implicitly sets the --target to the same architecture.
make does build a lot of stuff (producing a sizeable amount of warnings) when finally stopping at this error:
make[3]: Entering directory `/opt/llvm-gcc4.2-2.9/gcc'
/opt/llvm-gcc4.2-2.9/./gcc/xgcc -B/opt/llvm-gcc4.2-2.9/./gcc/ -B/opt/llvm-gcc4.2-2.9/../llvm-gcc4.2-2.9-install/x86_64-generic-linux-gnu/bin/ -B/opt/llvm-gcc4.2-2.9/../llvm-gcc4.2-2.9-install/x86_64-generic-linux-gnu/lib/ -isystem /opt/llvm-gcc4.2-2.9/../llvm-gcc4.2-2.9-install/x86_64-generic-linux-gnu/include -isystem /opt/llvm-gcc4.2-2.9/../llvm-gcc4.2-2.9-install/x86_64-generic-linux-gnu/sys-include -O2 -O2 -g -O2 -DIN_GCC -W -Wall -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wold-style-definition -isystem ./include -I. -I. -I../../llvm-gcc-4.2-2.9.source/gcc -I../../llvm-gcc-4.2-2.9.source/gcc/. -I../../llvm-gcc-4.2-2.9.source/gcc/../include -I../../llvm-gcc-4.2-2.9.source/gcc/../libcpp/include -I../../llvm-gcc-4.2-2.9.source/gcc/../libdecnumber -I../libdecnumber -I/opt/llvm-2.9/include -g0 -finhibit-size-directive -fno-inline-functions -fno-exceptions -fno-zero-initialized-in-bss -fno-toplevel-reorder -fno-omit-frame-pointer -fno-asynchronous-unwind-tables \
-c ../../llvm-gcc-4.2-2.9.source/gcc/crtstuff.c -DCRT_BEGIN \
-o crtbegin.o
In file included from /usr/include/stdio.h:28,
from ../../llvm-gcc-4.2-2.9.source/gcc/tsystem.h:90,
from ../../llvm-gcc-4.2-2.9.source/gcc/crtstuff.c:68:
/usr/include/features.h:323:26: error: bits/predefs.h: No such file or directory
/usr/include/features.h:356:25: error: sys/cdefs.h: No such file or directory
/usr/include/features.h:388:23: error: gnu/stubs.h: No such file or directory
I find it a bit odd that the include path goes from my system's stdio.h back to llvm-gcc headers and then tries again to include system headers. But maybe that's normal?
After that error hundreds of lines with more errors follow from the same compilation unit.
Could it be that my system's gcc 4.6.1 or my system's headers maybe grew incompatible with the dated llvm-gcc 4.2 headers? Then again, I know that on a different system (running the 2.6 kernel) gcc 4.5.2 plays well with llvm 2.7's gcc 4.2.
I'm at a loss here, because I do need a recent llvm 2.*, and the other two acceptable llvm versions (2.7, 2.8) didn't show any result more helpful.
It seems that /usr/include on your system provides 32-bit headers, thus the compilation fails since you do not have all multilib headers installed. You might need to patch llvm-gcc the same way as your distribution patches gcc in order to find the headers locations.
Alternatively, you might try to install 32-bit headers and try multilib build of llvm-gcc.
But the best way will be switch to LLVM 3.1 and clang :)

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