I am new with Bash, and trying to rename files in my folder keeping the first 9 characters intact and get rid of anything that comes after.
abc123456olda.jpg > abc123456.jpg
I wrote this;
for file in *
do
echo mv "$file" `echo "$file" | sed -e 's/(.{9}).*(\.jpg)$/$1$2/' *.jpg
done
Did not get it to work. Can someone guide what am I doing wrong?
You're not far off, try this:
for file in *.jpg; do
echo mv "$file" "$(echo "$file" | sed -E -e 's/(.{9}).*(\.jpg)$/\1\2/')"
done
There are some corrections. A important one is that $1$2 should be \1\2, and you need the -E flag to sed so that it understands the grouping with parenthesis.
Once you see the command is alright, remove the echo from the second line so mv actually gets executed.
Use bash's built-in parameter expansion operator rather than sed.
Also, you should put *.jpg in the for statement, not the sed argument; what you're doing is processing the contents of the files, not the filenames.
for file in *.jpg
do
mv "$file" "${file:0:9}.jpg"
done
${file:0:9} means the substring of $file starting from index 0 and having 9 characters.
Related
I want a script that replaces hyphens with dots in dates represented in filenames as XXXX-XX-XX. So something called 2019-09-05 moves to 2019.09.05. I've looked at other solutions for similar problems and have come up with the following:
for file in *-*-*; do
mv "$file" "$(echo "$file" | sed s/*-*-*/*.*.*/)"
done
But all this does is replace all the files separated by hyphens with a single file called ..*. I'm not fully sure how bash regex works or how I need to format the output side of it to make it work. Any ideas?
If you are using a pure bash environment and you don't mind for portability, you can use parameters expansion:
for file in *-*-*; do
mv "${file}" "${file//-/.}"
done
If you still want to use sed, just replace what you did with sed -e "s/-/./g"
EDIT:
As #pjh said, *-*-* used in the for statement will check for files starting with hyphen (-), too.
Because of that, it is better to avoid confusion using mv -- "${file}" "${file//-/.}" instead of simply mv "${file}" "${file//-/.}", making the script more robust.
To retain the three pieces you need to capture them with parentheses and then use backreferences (\1, \2, \3) them in the replacement string. Also sed expects a regular expression so * becomes .*.
for file in *-*-*; do
mv "$file" "$(echo "$file" | sed -r 's/(.*)-(.*)-(.*)/\1.\2.\3/')"
done
Alternatively, you could just replace dashes with dots and ignore the stuff in between.
for file in *-*-*; do
mv "$file" "$(echo "$file" | sed 's/-/./g')"
done
A even simpler way is to do the replacement with bash syntax rather than sed.
for file in *-*-*; do
mv "$file" "${file//-/.}"
done
I have a list of filenames like this in bash
UTSHoS10_Other_CAAGCC-TTAGGA_R_160418.R1.fq.gz
UTSHoS10_Other_CAAGCC-TTAGGA_R_160418.R2.fq.gz
UTSHoS11_Other_AGGCCT-TTAGGA_R_160418.R2.fq.gz
UTSHoS11_Other_AGGCCT-TTAGGA_R_160418.R2.fq.gz
UTSHoS12_Other_GGCAAG-TTAGGA_R_160418.R1.fq.gz
UTSHoS12_Other_GGCAAG-TTAGGA_R_160418.R2.fq.gz
And I want them to look like this
UTSHoS10_R1.fq.gz
UTSHoS10_R2.fq.gz
UTSHoS11_R1.fq.gz
UTSHoS11_R2.fq.gz
UTSHoS12_R1.fq.gz
UTSHoS12_R2.fq.gz
I do not have the perl rename command and sed 's/_Other*160418./_/' *.gz
is not doing anything. I've tried other rename scripts on here but either nothing occurs or my shell starts printing huge amounts of code to the console and freezes.
This post (Removing Middle of Filename) is similar however the answers given do not explain what specific parts of the command are doing so I could not apply it to my problem.
Parameter expansions in bash can perform string substitutions based on glob-like patterns, which allows for a more efficient solution than calling an extra external utility such as sed in each loop iteration:
for f in *.gz; do echo mv "$f" "${f/_Other_*-TTAGGA_R_160418./_}"; done
Remove the echo before mv to perform actual renaming.
You can do something like this in the directory which contains the files to be renamed:
for file_name in *.gz
do
new_file_name=$(sed 's/_[^.]*\./_/g' <<< "$file_name");
mv "$file_name" "$new_file_name";
done
The pattern (_[^.]*\.) starts matching from the FIRST _ till the FIRST . (both inclusive). [^.]* means 0 or more non-dot (or non-period) characters.
Example:
AMD$ ls
UTSHoS10_Other_CAAGCC-TTAGGA_R_160418.R1.fq.gz UTSHoS12_Other_GGCAAG-TTAGGA_R_160418.R1.fq.gz
UTSHoS10_Other_CAAGCC-TTAGGA_R_160418.R2.fq.gz UTSHoS12_Other_GGCAAG-TTAGGA_R_160418.R2.fq.gz
UTSHoS11_Other_AGGCCT-TTAGGA_R_160418.R2.fq.gz
AMD$ for file_name in *.gz
> do new_file_name=$(sed 's/_[^.]*\./_/g' <<< "$file_name")
> mv "$file_name" "$new_file_name"
> done
AMD$ ls
UTSHoS10_R1.fq.gz UTSHoS10_R2.fq.gz UTSHoS11_R2.fq.gz UTSHoS12_R1.fq.gz UTSHoS12_R2.fq.gz
Pure Bash, using substring operation and assuming that all file names have the same length:
for file in UTS*.gz; do
echo mv -i "$file" "${file:0:9}${file:38:8}"
done
Outputs:
mv -i UTSHoS10_Other_CAAGCC-TTAGGA_R_160418.R1.fq.gz UTSHoS10_R1.fq.gz
mv -i UTSHoS10_Other_CAAGCC-TTAGGA_R_160418.R2.fq.gz UTSHoS10_R2.fq.gz
mv -i UTSHoS11_Other_AGGCCT-TTAGGA_R_160418.R2.fq.gz UTSHoS11_R2.fq.gz
mv -i UTSHoS11_Other_AGGCCT-TTAGGA_R_160418.R2.fq.gz UTSHoS11_R2.fq.gz
mv -i UTSHoS12_Other_GGCAAG-TTAGGA_R_160418.R1.fq.gz UTSHoS12_R1.fq.gz
mv -i UTSHoS12_Other_GGCAAG-TTAGGA_R_160418.R2.fq.gz UTSHoS12_R2.fq.gz
Once verified, remove echo from the line inside the loop and run again.
Going with your sed command, this can work as a bash one-liner:
for name in UTSH*fq.gz; do newname=$(echo $name | sed 's/_Other.*160418\./_/'); echo mv $name $newname; done
Notes:
I've adjusted your sed command: it had an * without a preceeding . (sed takes a regular expression, not a globbing pattern). Similarly, the dot needs escaping.
To see if it works, without actually renaming the files, I've left the echo command in. Easy to remove just that to make it functional.
It doesn't have to be a one-liner, obviously. But sometimes, that makes editing and browsing your command-line history easier.
The script works as far as renaming the files but it moves the renamed files out of their respective folders.
I would like it to not move them but only rename them and I have failed after a few days of trying. I know this code is a mess and there is unneeded code in it but it nearly works.
Also the renamed file isn’t getting an extension of .txt but that isn't really an issue for me. I just want to see the "Dynamic Range Value" that is taken from inside the file as the file name so I don’t have to open every file (a couple thousand albums worth) to see what the DR is. Here is the code:
#!/bin/bash
cd /media/Storage/MusicWorks/Processing
find . -name 'dr14.txt' | while IFS=$'\n' read -r i
do mv -n "$i" `egrep -m1 -e 'Official DR value:' "$i" | sed -e 's/Official DR value://'`;
echo "Done"
done
I run this script from the terminal with a bash alias.
I have reservations about the egrep | sed part of your script, but if they work for you, so be it. You need to preserve the pathname of the file, for example like this:
find . -name 'dr14.txt' |
while IFS=$'\n' read -r i
do
newname="${i%/*}"/$(egrep -m1 -e 'Official DR value:' "$i" | sed -e 's/Official DR value://');
mv -n "$i" "$newname"
echo "Done $i ($newname)"
done
The ${i%/*} notation removes anything from the last slash to the end of the name in $i. Since all the names from find will start with ./, this is secure enough; it would not work well on absolute names such as / and /unix (the output would be the empty string, but /usr/bin/sh would be fine).
Under a little prompting by tripleee in a comment, it is possible to simplify the egrep | sed part of the code to:
newname="${i%/*}"/$(sed -n -e '/Official DR value:/{s///p;q;}' "$i");
The second semicolon is needed with BSD sed but not with GNU sed.
I have the following files in the following format:
$ ls CombinedReports_LLL-*'('*.csv
CombinedReports_LLL-20140211144020(Untitled_1).csv
CombinedReports_LLL-20140211144020(Untitled_11).csv
CombinedReports_LLL-20140211144020(Untitled_110).csv
CombinedReports_LLL-20140211144020(Untitled_111).csv
CombinedReports_LLL-20140211144020(Untitled_12).csv
CombinedReports_LLL-20140211144020(Untitled_13).csv
CombinedReports_LLL-20140211144020(Untitled_14).csv
CombinedReports_LLL-20140211144020(Untitled_15).csv
CombinedReports_LLL-20140211144020(Untitled_16).csv
CombinedReports_LLL-20140211144020(Untitled_17).csv
CombinedReports_LLL-20140211144020(Untitled_18).csv
CombinedReports_LLL-20140211144020(Untitled_19).csv
I would like this part removed:
20140211144020 (this is the timestamp the reports were run so this will vary)
and end up with something like:
CombinedReports_LLL-(Untitled_1).csv
CombinedReports_LLL-(Untitled_11).csv
CombinedReports_LLL-(Untitled_110).csv
CombinedReports_LLL-(Untitled_111).csv
CombinedReports_LLL-(Untitled_12).csv
CombinedReports_LLL-(Untitled_13).csv
CombinedReports_LLL-(Untitled_14).csv
CombinedReports_LLL-(Untitled_15).csv
CombinedReports_LLL-(Untitled_16).csv
CombinedReports_LLL-(Untitled_17).csv
CombinedReports_LLL-(Untitled_18).csv
CombinedReports_LLL-(Untitled_19).csv
I was thinking simply along the lines of the mv command, maybe something like this:
$ ls CombinedReports_LLL-*'('*.csv
but maybe a sed command or other would be better
rename is part of the perl package. It renames files according to perl-style regular expressions. To remove the dates from your file names:
rename 's/[0-9]{14}//' CombinedReports_LLL-*.csv
If rename is not available, sed+shell can be used:
for fname in Combined*.csv ; do mv "$fname" "$(echo "$fname" | sed -r 's/[0-9]{14}//')" ; done
The above loops over each of your files. For each file, it performs a mv command: mv "$fname" "$(echo "$fname" | sed -r 's/[0-9]{14}//')" where, in this case, sed is able to use the same regular expression as the rename command above. s/[0-9]{14}// tells sed to look for 14 digits in a row and replace them with an empty string.
Without using an other tools like rename or sed and sticking strictly to bash alone:
for f in CombinedReports_LLL-*.csv
do
newName=${f/LLL-*\(/LLL-(}
mv -i "$f" "$newName"
done
for f in CombinedReports_LLL-* ; do
b=${f:0:20}${f:34:500}
mv "$f" "$b"
done
You can try line by line on shell:
f="CombinedReports_LLL-20140211144020(Untitled_11).csv"
b=${f:0:20}${f:34:500}
echo $b
You can use the rename utility for this. It uses syntax much like sed to change filenames. The following example (from the rename man-page) shows how to remove the trailing '.bak' extension from a list of backup files in the local directory:
rename 's/\.bak$//' *.bak
I'm using the advice given in the top response and have put the following line into a shell script:
ls *.nii | xargs rename 's/[f_]{2}//' f_0*.nii
In terminal, this line works perfectly, but in my script it will not execute and reads * as a literal part of the file name.
I am trying to create a small Bash script to remove hyphens from a filename. For example, I want to rename:
CropDamageVO-041412.mpg
to
CropDamageVO041412.mpg
I'm new to Bash, so be gentle :] Thank you for any help
Try this:
for file in $(find dirWithDashedFiles -type f -iname '*-*'); do
mv $file ${file//-/}
done
That's assuming that your directories don't have dashes in the name. That would break this.
The ${varname//regex/replacementText} syntax is explained here. Just search for substring replacement.
Also, this would break if your directories or filenames have spaces in them. If you have spaces in your filenames, you should use this:
for file in *-*; do
mv $file "${file//-/}"
done
This has the disadvantage of having to be run in every directory that contains files you want to change, but, like I said, it's a little more robust.
FN=CropDamageVO-041412.mpg
mv $FN `echo $FN | sed -e 's/-//g'`
The backticks (``) tell bash to run the command inside them and use the output of that command in the expression. The sed part applies a regular expression to remove the hyphens from the filename.
Or to do this to all files in the current directory matching a certain pattern:
for i in *VO-*.mpg
do
mv $i `echo $i | sed -e 's/-//g'`
done
A general solution for removing hyphens from any string:
$ echo "remove-all-hyphens" | tr -d '-'
removeallhyphens
$
f=CropDamageVO-041412.mpg
echo "${f//-}"
or, of course,
mv "$f" "${f//-}"