vscode debugger configuration: cwd - debugging

I'm trying to configure a debugger for my project.
Here is the problem.
The project folder structure can be simplified like this:
- Project Root
- X
- Y
- etc
I absolutely need to set the cwd in the debugger config as X, otherwise the binary won't run. If I set it as X, program runs, debugger (sort of) works: I see the call stack and the values of the variables. However, vscode cannot find the files with code and I can't see the lines being executed. VSCode also gives me an error:
Unable to open 'file.cpp':
Unable to read file '/blahblah/cwd/Y/file.cpp'
Error: unable to resolve non-existing file.
So the debugger rightfully uses the cwd as a prefix to the rest of the file path, but Y is not nested into X, it is actually in the same root directory.
Again, I absolutely need the binary to be called from the X directory. Is there any way to tell vscode the proper path to the code files in this case?

So here is what worked for me:
// added this to launch.json
"sourceFileMap: {
"proc/self/cwd" : "{workspaceFolder}"
}
From the VSCode docs:
sourceFileMap:
This allows mapping of the compile-time paths for source
to local source locations. It is an object of key/value pairs and will
resolve the first string-matched path. (example: "sourceFileMap": {
"/mnt/c": "c:\" } will map any path returned by the debugger that
begins with /mnt/c and convert it to c:\. You can have multiple
mappings in the object but they will be handled in the order
provided.)
My problem was that the directory from which I needed the process to run didn't match the directory where the source files are located. In the error message vscode gave me I saw the path it uses to try to find source files ("/proc/self/cwd"). So I mapped this path to the one I actually need (just the workspaceFolder in my case).

Related

Unable to Install Facebook Duckling on Windows - Stack Exec Fails

I'm trying to setup Facebook Duckling on Windows 10.
When I execute: stack exec duckling-example-exe it produces the following error:
duckling-example-exe.EXE: /etc/zoneinfo/: getDirectoryContents:findFirstFile: does not exist (The system cannot find the path specified.)
I don't understand why I'm getting this error since I followed the recommendation on this GitHub thread which suggests replacing "/usr/share/zoneinfo/" in Duckling/exe/ExampleMain.hs with a link to a folder containing the zoneinfo files. You can see I replaced the path as suggested in the screenshot below:
I also tried adding a double slash as seen below - but it didn't help:
I tried with forward slash instead but this didn't help either:
Moreover, I don't understand where the path: /etc/zoneinfo/ is coming from, if the path is no longer present in ExampleMain.hs? Where is the compiler pulling the path from?
Thanks!
You need to run stack exec duckling-example-exe in the directory where the stack.yaml and project.yaml files of the duckling source code is that you are trying to modify. Otherwise it will use the version of duckling from stackage without your changes.

Problem with files using prolog (Existence error)

Why would the file run with no problems when using Eclipse but when I create a jar file of the same program I can't run it locally on my pc?
This is the error I get where a is an input and signal.pl is a file I pass located in Desktop:
C:\Users\HP\Desktop>java -jar ADE2.jar a signal.pl
Exception in thread "main" org.jpl7.PrologException: PrologException: error(existence_error(source_sink, a), _0)
at org.jpl7.Query.fetchNextSolution(Query.java:438)
at org.jpl7.Query.hasMoreSolutions(Query.java:342)
at org.jpl7.Query.oneSolution(Query.java:872)
at org.jpl7.Query.hasSolution(Query.java:950)
at ADE.executeGorgias(ADE.java:19)
at ADE.main(ADE.java:41)
I assume that you have two different working directories in your two scenaries.
SWI-Prolog provides the working_directory/2 predicate in the form of working_directory(-Old, +New).
As the documentation states:
Unify Old with an absolute path to the current working directory and change working directory to New. Use the pattern working_directory(CWD, CWD) to get the current directory.
Thus, I would suggest to test working_directory(CWD, CWD) in both cases to see if your working directory differs, which may lead to probelms when working with relative paths.
Edit: You can also use absolute_file_name/3 to ensure that your "Eclipse use case" and your "jar use case" resolve the file in the same way.

Front end and back end not compatible - get more linker information

while building a project in VisualStudio 2012 I get the error message
LINK : fatal error C1905: Front end and back end not compatible (must target same processor).
Checking the project manually does not help, all involved (static) libraries have been built for the same processor. I also added
/VERBOSE:lib and /VERBOSE
to command line to get some more information but this does not help, only additional output line I got by this was a stupid
Starting pass 1
So: any ideas how I can find out what causes this strange error message? How can I get more output from the linker?
Thanks!
Old question and I'm not sure whether anyone still need an answer. I had this problem with Visual Studio 2017.
Check paths for generated .obj files, especially when you use some .cpp files in more than one project (within solution) and/or use %(RelativeDir) variable in Properties -> C/C++ -> Output Files -> Object File Name. It happened to me with this path in Object File Name '$(IntDir)\%(RelativeDir)' and this $(ProjectDir)Junk\$(Platform)\ in Intermediate Directory. Error gone when I moved $(Platform) part to Object File Name.
Old paths:
Intermediate Directory: $(ProjectDir)Junk\$(Platform)\.
Object File Name: $(IntDir)\%(RelativeDir).
New paths:
Intermediate Directory: $(ProjectDir)Junk\.
Object File Name: $(IntDir)$(Platform)\%(RelativeDir).
You can also specify Object File Name option for each file, shared between multiple projects to keep using old path (or if new paths configuration isn't working for you) and get rid of that error.

appledoc Exception: at least one directory

After wasting some time to figure out what goes wrong, I finally have to ask for help. I want to use appledocs from Gentle Bytes. I followed every step of the quick install guide, but I´m not able to compile the project.
Here is what I´ve done:
1. cloned it from git://github.com/tomaz/appledoc.git
2. installed the templates to ~/Library/Application Support/appledoc
3. tried to compile the project
Everytime I try to compile, I get following error:
ERROR: AppledocException: At least one directory or file name path is required, use 'appledoc --help'
What do I have to do now?
Sounds like you've compiled it just fine and are now running the program. If it's a command-line program try command-option-R in Xcode to provide some arguments (i.e. names of files that you want to process).
The error means you didn't give it source paths: after all switches, you must give it at least one path to your source files. Can be either file or directory. In later case it will recursively scan the dir. Here's example
appledoc <options> ~/MyProject
Above example will use ~/MyProject directory as a source. You can also add multiple source paths. Note that you need to give the tool few options, see this page for minimum command line and other usage examples.
You either have to copy appledoc executable to one of directories in your path, as suggested by Caleb, or use full path to it when invoking (for example: /path/to/appledoc)

Why am I getting this error in my Primer3/eprimer3 Mac OSX build?

I'm getting this error on my mac osx build.
Primer3/eprimer3 issue:
Error: thermodynamic approach chosen, but path to thermodynamic parameters not specified
From:
http://www.mcardle.wisc.edu/mprime/help/primer3/primer3_manual.htm#globalTags
PRIMER_THERMODYNAMIC_PARAMETERS_PATH (string; default ./primer3_config)
This tag specifies the path to the directory that contains all the parameter files used by the thermodynamic approach. In Linux, there are two default locations that are tested if this tag is not defined: ./primer3_config/ and /opt/primer3_config/. For Windows, there is only one default location: .\primer3_config\.
I put the primer3_config in my PATH in bin and still cannot solve this issue. I even did:
export PRIMER_THERMODYNAMIC_PARAMETERS_PATH=/Users/jared/Downloads/primer3-2.3.2/src
and
export PRIMER_THERMODYNAMIC_PARAMETERS_PATH=/Users/jared/Downloads/primer3-2.3.2/src/primer3_config
to no avail.
According to the primer3 manual:
1.5. IMPORTANT: because PRIMER_THERMODYNAMIC_ALIGNMENT=1
PRIMER_THERMODYNAMIC_PARAMETERS_PATH must point to the right location.
This tag specifies the path to the directory that contains all the
parameter files used by the thermodynamic approach. In Linux, there
are two default locations that are tested if this tag is not
defined: ./primer3_config/ and /opt/primer3_config/. For Windows,
there is only one default location: .\primer3_config. If the the
parameter files are not in one these locations, be sure to set
PRIMER_THERMODYNAMIC_PARAMETERS_PATH.
So if you download and compile primer3 form source using the Make command, to get primer3 to run globally you need to copy the executueable, primer3_core, to your path and place the configuration directory, primer3_config in that same directory or at /opt/primer3_config
cd src
sudo cp primer3_core /usr/local/bin # or /usr/bin
sudo cp -r primer3_config /opt/
I has the same issue. I had installed Primer 3 using homebrew-science which was pretty painless. https://github.com/Homebrew/homebrew-science
I did try copying the primer3_config directory into the homebrew primer3 directory, ie:
/usr/local/Cellar/primer3/2.3.4/bin/primer3_config but this also did not work.
In the end I added the PRIMER_THERMODYNAMIC_PARAMETERS_PATH configuration to the primer 3 input file, and this worked. Note that the directory name must have a trailing slash. It is the last entry in the file below which is copied from the example file in the primer3 sources.
SEQUENCE_ID=example
SEQUENCE_TEMPLATE=GTAGTCAGTAGACNATGACNACTGACGATGCAGACNACACACACACACACAGCACACAGGTATTAGTGGGCCATTCGATCCCGACCCAAATCGATAGCTACGATGACG
SEQUENCE_TARGET=37,21
PRIMER_TASK=pick_detection_primers
PRIMER_PICK_LEFT_PRIMER=1
PRIMER_PICK_INTERNAL_OLIGO=1
PRIMER_PICK_RIGHT_PRIMER=1
PRIMER_OPT_SIZE=18
PRIMER_MIN_SIZE=15
PRIMER_MAX_SIZE=21
PRIMER_MAX_NS_ACCEPTED=1
PRIMER_PRODUCT_SIZE_RANGE=75-100
P3_FILE_FLAG=1
SEQUENCE_INTERNAL_EXCLUDED_REGION=37,21
PRIMER_EXPLAIN_FLAG=1
PRIMER_THERMODYNAMIC_PARAMETERS_PATH=/usr/local/Cellar/primer3/2.3.4/bin/primer3_config/
=
Then run it like this:
$ primer3_core < example2

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