I'm trying to reorient some images with fslreorient2std in an Ubuntu 20.4 shell running on Windows 10. I've installed WSL2 and FSL. When I run the command fslreorient2std in a directory where there is the image file (.nii), the following error message appear:
ERROR: Could not find image ws44891-153636-00001-00192-1.nii
See also below.
$ ls
ws44891-153636-00001-00192-1.nii
$fslreorient2std ws44891-153636-00001-00192-1.nii ws44891-153636-00001-00192-1_reorient.nii
ERROR: Could not find image ws44891-153636-00001-00192-1.nii
I tried to download test images in other formats or test other .nii images I have, and the error is always the same.
I'd be grateful for any help, thank you !
Related
I am fairly new to virtualbox and i want to install Oracle Database on my mac but i keep getting this error upon importing to virtualbox
i tried uninstall and reinstalling the virtualbox but keeps getting the same error can someone help me?
Go to downloaded link copy down Md5 check sum and verify with md5 command for the downloaded file,if checksum don't match you need to download again.(most probably you have incomplete or corrupted file).Since import failed I think it's best to download again and verify checksum
e.g Dowloaded OracleBigDatalite as well as md5sum.txt
$ cat md5sum.txt
26197c5d1f8e22102dc2f3641a58a851 BigDataLite411.7z.001
91198541deae1925888534ad5bc68e87 BigDataLite411.7z.002
67a2c534d407a18b5193df262173b815 BigDataLite411.7z.003
2da5928c2cca49a8e296a3fc2ef52de0 BigDataLite411.7z.004
ff35b60c518162e9fd4a15c170d53ee1 BigDataLite411.7z.005
970a860bb7e0efacee7a609a1e4d4414 BigDataLite411.7z.006
601927d6910acde33fe1fb377799d4a4 BigDataLite411.7z.007
c6e3763d73217ce7ffc921123f2c7c4b BigDataLite411.7z.008
b71ed4a3fbd79c269d6fe59e630c0ec1 BigDataLite411.7z.009
f2d25d520719e6d7adea273bf48ec147 BigDataLite411.7z.010
dc6db7a2834022747e0b7aba160e0a23 BigDataLite411.7z.011
ade4d056b6c71912f727eb5f57cc3db6 BigDataLite411.7z.012
$ md5sum BigDataLite411.7z.001
26197c5d1f8e22102dc2f3641a58a851 BigDataLite411.7z.001
First file in downloaded files checksum is matching with md5.txt(md5sum command on Ubuntu WSL on Mac I'm hoping it's md5)
P.S:-I don't have enough points to comment
So I am trying to read the meta data of EXR files using Imagemagick npm package and it works fine on smaller files, but on larger files I am getting this error
Uncaught Error: Command timed out
I tried editing the policy.xml and increased the time, but still not working. Any workaround or how to fix this?
Getting and error as shown in the attached image. Unable to proceed ahead with the installation.
When I try to explicitly run the command which at which the installation is halted through Windows Command Prompt i get the same error.
Command -
"C:\Users\Sharu\AppData\Local\Continuum\anaconda3\pythonw.exe" -E -s "C:\Users\Sharu\AppData\Local\Continuum\anaconda3\Lib_nsis.py" post_install
Any help to resolve this would be greatly appreciated ! Thanks in Advance ! Image is attached below -
< Installtion-error-capture-click-me >
I have an error converting some pdf files, it is:
Internal Error: File Offset wrong for ttf table (name-data), -1 expected 174
Save Failed
Cannot save font to C:\Users\test\AppData\Local\Temp//pdf2htmlEX-a14136/__tmp_font1.ttf
I'm using Windows last executable:
pdf2htmlEX version 0.14.6
Libraries:
poppler 0.33.0
libfontforge 20150621
cairo 1.12.18
Supported image format: png jpg svg
I'm testing it and fails at page 76 but if I change pages order, it still fails at page 76, even if I remove it from file.
It's fails even with command:
pdf2htmlEx test.pdf
And testing to split it into files of 10 pages for example, it works OK... but I can't use it, I need to convert full pdf.
I've googled this error, that is received through both octave console and xoctave, and tried the suggestions to include the cd command followed by setting the IMAGE_PATH both to the same image path.
After trying the above suggestion, the imread still doesn't work emitting the same error; the path where the image exists is the very same as that of xoctave's default workspace. I've already went through Xoctave's options>console> Where is Octave to insert the correct directory to octave.exe and then saved and reopened xoctave.
The error is:
error: imread: cannot find image.jpg
error: called from:
error: C:\octave\3.2.4.gcc-4.4.O\share\octave\3.2.4\m\image\imread.m at 1ine 53, column 5
On octave installation, I've chosen the default installation settings (as partly seen below), as well as all the "Octave Forge" packages ("image" inclusive). I've then installed and extracted the image processing toolbox found here.
The strange thing is that I've had the same imread error on a different computer (running windows XP) that was resolved as soon as I've changed directory (cd) and set IMAGE_PATH to the required workspace. Also, on using ls to list the directory's contents, the image is found within as expected.
I'm using Octave 3.2.4 and Xoctave 0.9.79 beta; running on Windows 7 64-bit.