Cannot install geopandas - installation

I am trying to instal geopandas. It goes like this:
(base) PS C:\Users\a_e_f> conda install geopandas
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen
solve. Retrying with flexible solve.
Solving environment: \
Found conflicts! Looking for incompatible packages.
This can take several minutes. Press CTRL-C to abort.
Examining tornado:*
etc etc for more than an hour.
How I got here:
I installed anaconda many months ago but never got around to using it. Now I need to do something with geopandas so...
I tried to update anaconda. Got some warnings & so decided to uninstall it & do a new clean install.
I attempted to uninstall anacondas but found the instructions unclear & missed a step. Reinstalled anaconda. geopandas wouldn't install.
Research revealed the missing uninstall step. Did it again. Looked like it was all gone.
Installed anaconda. Verified as here: https://docs.anaconda.com/anaconda/install/verify-install/#
Tried to install geopandas. See above.
I am using Windows 10

Do not install packages into the base environment, create new, clean ones for your project.
Use conda-forge channel where GeoPandas team has the ability to fine tune installation process
conda create -n geo_env
conda activate geo_env
conda config --env --add channels conda-forge
conda config --env --set channel_priority strict
conda install geopandas
if that doesn't help, use mamba to install GeoPandas.
conda create -n geo_env
conda activate geo_env
conda config --env --add channels conda-forge
conda config --env --set channel_priority strict
conda install mamba
mamba install geopandas

Following merv's hints (above) I used the approach here: Conda install some-package hangs with (Solving environment: failed)
That seems to have fixed the problem.
Thanks all for your help.

Related

How can I install python-binance package in Pycahrm? (I am using the conda interpreter for my project)

I am trying to install the Python-binance package to Pycharm, but it is not available for the conda interpreter that I use.
When I try to install it via 'conda install python-binance' in my terminal I get the following error:
(base) patrickchong#Patricks-MacBook-Pro ~ % conda install python-binance
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
PackagesNotFoundError: The following packages are not available from current channels:
- python-binance
Current channels:
- https://repo.anaconda.com/pkgs/main/osx-64
- https://repo.anaconda.com/pkgs/main/noarch
- https://repo.anaconda.com/pkgs/r/osx-64
- https://repo.anaconda.com/pkgs/r/noarch
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
Which is strange, because it installs fine when I run 'pip install python-binance'.
Any help would be much appreciated!
Thanks to Flying Teller's comments below I managed to install python-binance using conda. However, in my Python interpreter, which uses conda, python-binance still doesn't appear? (when I click the + sign and look for python-binance it is not there?)
There is nothing unexpected happening here. pip and conda use different sources for their packages. pip always checks PyPi on which python-binance is available. conda looks for packages in a list of configured channels, in you case, the default channels. But if you check with the search function on anaconda.org, you can see that the package is only available from conda-forge, so you can install it from conda using
conda install -c conda-forge python-binance

conda install python-graphviz: stuck at Solving environment

When I tried to conda install python-graphviz in Anaconda3 on my Ubuntu machine, it stuck at Solving environment:
(base) $ conda install python-graphviz
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: /
What's the problem?
I had the same problem. The following was my solution:
Install graphviz manually.
E.g. for ubuntu:
sudo apt install graphviz graphviz-dev
Then do a pip install for the python package.
pip install graphviz
Confusingly the pip install of graphviz is the same as the conda install of python-graphviz. (bad naming)
Typing this from my phone so better double check my commands for typos. Let me know if that solved it.

Error during qiime1 installation on MacOS Mojave

I am trying to install qiime1 environment using terminal on Mac. Currently getting an error saying packages not found for matplotlib 1.4.3.
I struggled with the same issue, matplotlib 1.4.3 package not found, and subsequently tried many different solutions, pip install and so on. So I am posting the solution that worked for me, I cannot remember where I found the different suggestions, but the downgrade of conda was key to make it work (thanks to whomever it was that suggested it in the first place):
conda config --set allow_conda_downgrades true
conda install conda=4.6.14
conda create -n qiime1 python=2.7 qiime matplotlib=1.4.3 mock nose -c bioconda
print_qiime_config.py -t
Once you've installed qiime you can upgrade your conda to the most recent version if you like

Conda won't remove package

Am I doing something wrong in my commands? I can't remove Keras.
$ conda remove --name myEnv keras
Collecting package metadata (repodata.json): done
Solving environment: failed
PackagesNotFoundError: The following packages are missing from the target environment:
- keras
$ conda list --name myEnv keras
# packages in environment at /Users/me/anaconda3/envs/myEnv:
#
# Name Version Build Channel
keras 2.3.1 pypi_0 pypi
The channel pypi for keras means you have mix used pip and conda. To uninstall the keras installed from pypi, use pip.
pip uninstall keras
It's not a good idea to mix use both package managers pip and conda in one environment. If you really need to. Read the official guide Using Pip in a Conda Environment.
conda remove --force (the rest of the command)
Pip Interoperability
As #Simba correctly identified, the package is from PyPI (i.e., it was installed via pip). By default, Conda can recognize the presence of such packages but will not interact with them. However, there is a "preview" configuration option, pip_interop_enabled, that enables such interaction (see Conda v4.6 Release Notes). You could either
Set this option globally:
conda config --set pip_interop_enabled true
conda remove --name myEnv keras
If you have PyPI packages generally, then this should help improve your env stability, but at the cost of slightly longer solve times, since now Conda will account for packages coming from PyPI.
Temporarily turn it on just for this operation
CONDA_PIP_INTEROP_ENABLED=1 conda remove --name myEnv keras

Can't create Anaconda environment with python=3.4

I'm trying to set up a Anaconda environment with Python=3.4.
(base) C:\WINDOWS\system32>conda create -n py34 version=3.4
I already include the conda-forge channel, but still get this error:
Collecting package metadata (current_repodata.json): done
Solving environment: failed with current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: failed
PackagesNotFoundError: The following packages are not available from current channels:
- version=3.4
Current channels:
- https://repo.anaconda.com/pkgs/main/win-64
- https://repo.anaconda.com/pkgs/main/noarch
- https://repo.anaconda.com/pkgs/r/win-64
- https://repo.anaconda.com/pkgs/r/noarch
- https://repo.anaconda.com/pkgs/msys2/win-64
- https://repo.anaconda.com/pkgs/msys2/noarch
- https://conda.anaconda.org/conda-forge/win-64
- https://conda.anaconda.org/conda-forge/noarch
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
When i try it with:
(base) C:\WINDOWS\system32>conda create -n py34 python=3.4 -c conda-forge
I get:
Collecting package metadata (current_repodata.json): done
Solving environment: failed with current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: failed
UnsatisfiableError: The following specifications were found to be incompatible with each other:
Package vc conflicts for:
python=3.4 -> vc=10
Package pip conflicts for:
python=3.4 -> pip
Package vs2010_runtime conflicts for:
python=3.4 -> vs2010_runtime
I'm pretty new to Anaconda and Python and dont know what to search for anymore.
This post: Why conda cannot create environment with python=3.4 installed in it didnt help either.
Firstly you can provide more details by increasing the verbosity of the create command, which will provide useful debug messages. Each -v increases the verbosity from INFO to DEBUG to TRACE. I normally always use DEBUG because I hate seeing it just sit there when solving an environment.
conda create -v -v -v -n py34 python=3.4
I don't believe you needed to add conda-forge, the problem with your first command was that you didn't specify python=3.4, you did version=3.4. Try it without conda-forge and including python=3.4 instead.
It also looks like your conda is broken, it's failing to resolve the environments which is likely not helping the situation. Try to fix that with
conda update --all
If you are still stuck with the same problem then review the conflicts with the following commands
conda info vc
conda info pip
conda info vs2010_runtime
I believe there is a chance that some of the packages in your base are incompatible with 3.4. In this case you could try to install without any default packages
conda create --no-default-packages -n py34 python=3.4
If you are still running into issues, there is a chance there is something janky with your config files, so I would try doing a complete uninstall of anaconda on windows. And then attempt this again.
Ok, 3 days later i found out that the latest Version of Anaconda is kinda broken. I downgraded to version 4.6.14 and now everythings seems to work.
conda config --set allow_conda_downgrades true
conda install conda=4.6.14
Solving environment: failed with current_repodata.json, will retry with next repodata source. UnsatisfiableError:

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