I am struggeling to install an oracle driver and use it in my Jenkins builds.
My goal is this:
I would like to run cypress e2e tests in a jenkins pipe. Cypress should be able to execute oracle statements to prepare the database for some tests.
Therefore I created a script with the npm package 'oracledb'. This is working fine on my windows machine.
But in the Jenkins pipe, I can not download the needed instantclient driver files.
So I started to create my own jenkins agent. This agent is a Docker Image which is created from 'FROM cypress/browsers:node14.17.0-chrome91-ff89'. And it is then downloading and unzipping the instantclient drivers.
So far so good, but when I execute a Task on that created agent. I can not find or use the driver that the agent should provide.
So my question is: How can I provide a instantclient installation on an Jenkins agent to be used in executions?
Dockerfile:
FROM cypress/browsers:node14.17.0-chrome91-ff89
USER root
ENV JAVA_TOOL_OPTIONS=-Dfile.encoding=UTF-8
ENV LANG=en_GB.UTF-8
RUN mkdir -p /home/jenkins && \
chown -R 1001:0 /home/jenkins && \
chmod -R g+w /home/jenkins
RUN ls /home -all
RUN mkdir -p /opt/oracle && \
chown -R 1001:0 /opt/oracle && \
chmod -R g+w /opt/oracle
WORKDIR /opt/oracle
RUN apt-get update && apt-get install -y libaio1 wget unzip
RUN wget https://download.oracle.com/otn_software/linux/instantclient/instantclient-basiclite-linuxx64.zip && \
unzip instantclient-basiclite-linuxx64.zip && rm -f instantclient-basiclite-linuxx64.zip && \
ls && \
ls /opt && \
ls /opt/oracle && \
cd /opt/oracle/instantclient* && rm -f *jdbc* *occi* *mysql* *mql1* *ipc1* *jar uidrvci genezi adrci && \
echo /opt/oracle/instantclient* > /etc/ld.so.conf.d/oracle-instantclient.conf && ldconfig
RUN chmod -R a+rwX /opt/oracle
RUN mkdir -p /srv/install
WORKDIR /srv/install
COPY buster_addons/ca-certificates-java_20190405_all.deb /srv/install/ca-certificates-java_20190405_all.deb
COPY buster_addons/fonts-dejavu-extra_2.37-1_all.deb /srv/install/fonts-dejavu-extra_2.37-1_all.deb
COPY buster_addons/java-common_0.71_all.deb /srv/install/java-common_0.71_all.deb
COPY buster_addons/libpcsclite1_1.8.24-1_amd64.deb /srv/install/libpcsclite1_1.8.24-1_amd64.deb
COPY buster_addons/libatk-wrapper-java_0.38.0-1_all.deb /srv/install/libatk-wrapper-java_0.38.0-1_all.deb
COPY buster_addons/libatk-wrapper-java_0.33.3-22_all.deb /srv/install/libatk-wrapper-java_0.33.3-22_all.deb
COPY buster_addons/libatk-wrapper-java-jni_0.33.3-22_amd64.deb /srv/install/libatk-wrapper-java-jni_0.33.3-22_amd64.deb
COPY buster_addons/openjdk-11-jre_11.0.7+10-3_deb10u1_amd64.deb /srv/install/openjdk-11-jre_11.0.7+10-3_deb10u1_amd64.deb
COPY buster_addons/openjdk-11-jdk_11.0.7+10-3_deb10u1_amd64.deb /srv/install/openjdk-11-jdk_11.0.7+10-3_deb10u1_amd64.deb
COPY buster_addons/openjdk-11-jre-headless_11.0.7+10-3_deb10u1_amd64.deb /srv/install/openjdk-11-jre-headless_11.0.7+10-3_deb10u1_amd64.deb
COPY buster_addons/openjdk-11-jdk-headless_11.0.7+10-3_deb10u1_amd64.deb /srv/install/openjdk-11-jdk-headless_11.0.7+10-3_deb10u1_amd64.deb
RUN dpkg -i /srv/install/java-common_0.71_all.deb && \
dpkg -i /srv/install/libpcsclite1_1.8.24-1_amd64.deb && \
dpkg -i --force-all /srv/install/openjdk-11-jre-headless_11.0.7+10-3_deb10u1_amd64.deb && \
dpkg -i /srv/install/ca-certificates-java_20190405_all.deb && \
dpkg -i /srv/install/libatk-wrapper-java_0.38.0-1_all.deb && \
dpkg -i /srv/install/openjdk-11-jre_11.0.7+10-3_deb10u1_amd64.deb && \
dpkg -i /srv/install/libatk-wrapper-java-jni_0.33.3-22_amd64.deb && \
dpkg -i /srv/install/libatk-wrapper-java_0.33.3-22_all.deb && \
dpkg -i /srv/install/fonts-dejavu-extra_2.37-1_all.deb && \
dpkg -i /srv/install/openjdk-11-jdk-headless_11.0.7+10-3_deb10u1_amd64.deb && \
dpkg -i /srv/install/openjdk-11-jdk_11.0.7+10-3_deb10u1_amd64.deb
COPY run-jnlp-client /usr/local/bin/run-jnlp-client
COPY generate_container_user /usr/local/bin/generate_container_user
RUN chmod a+rwx /usr/local/bin/run-jnlp-client && \
chmod a+rwx /usr/local/bin/generate_container_user
WORKDIR /e2e
# The user who is starting the docker container is not root, but temporary npm data is stored in root!
RUN chmod -R a+rwX /e2e
RUN mkdir -p /tmp && \
chown -R 1001:0 /tmp
RUN ls /tmp -all
# Run the Jenkins JNLP client
ENTRYPOINT ["/usr/local/bin/run-jnlp-client"]
The JNLP stuff is from here: https://github.com/openshift/jenkins/blob/master/slave-base/contrib/bin/run-jnlp-client
Related
I am running an Asgi-based Django Application(Rest Framework) using AWS Kubernetes in the production environment. Everything is running fine at AMD Processor(c5.2xlarge, c5.4xlarge). To decrease the cost we are trying to migrate the application to AWS Graviton Processor(c6g.2xlarge, c6g.4xlarge). But we are observing an increase in the 90% latency to 10X.
The command used for running the application -
DD_DJANGO_INSTRUMENT_MIDDLEWARE=false ddtrace-run gunicorn --workers 1 --worker-tmp-dir /dev/shm --log-file=- --thread 2 --bind :8080 --log-level INFO --timeout 5000 asgi:application -k uvicorn.workers.UvicornWorker
I have one more application that is WSGI based and it's working fine at the graviton processor.
Attaching the docker code -
FROM python:3.9-slim
RUN apt update -y
RUN mv /var/lib/dpkg/info/libc-bin.* /tmp/ && apt install libc-bin && mv /tmp/libc-bin.* /var/lib/dpkg/info/
#
### Create a group and user to run our app
## ARG APP_USER=user
## RUN groupadd -r ${APP_USER} && useradd --no-log-init -r -g ${APP_USER} ${APP_USER}
#
## Install packages needed to run your application (not build deps):
## mime-support -- for mime types when serving static files
## postgresql-client -- for running database commands
## We need to recreate the /usr/share/man/man{1..8} directories first because
## they were clobbered by a parent image.
RUN set -ex \
&& RUN_DEPS=" \
libpcre3 \
git \
mime-support \
postgresql-client \
libmagic1\
fail2ban libjpeg-dev libtiff5-dev zlib1g-dev libfreetype6-dev liblcms2-dev libxslt-dev libxml2-dev \
gdal-bin sysstat libpq-dev binutils libproj-dev procps" \
&& seq 1 8 | xargs -I{} mkdir -p /usr/share/man/man{} \
&& apt-get update && apt-get install -y --no-install-recommends $RUN_DEPS \
&& rm -rf /var/lib/apt/lists/*
ADD requirements /requirements
#ADD package.json package.json
#
## Install build deps, then run `pip install`, then remove unneeded build deps all in a single step.
## Correct the path to your production requirements file, if needed.
RUN set -ex \
&& BUILD_DEPS=" \
build-essential \
libpcre3-dev \
libpq-dev \
" \
&& apt-get update && apt-get install -y --no-install-recommends $BUILD_DEPS \
# && npm install --production --no-save \
&& pip install --no-cache-dir -r /requirements/requirements.txt \
&& apt-get purge -y --auto-remove -o APT::AutoRemove::RecommendsImportant=false $BUILD_DEPS \
&& rm -rf /var/lib/apt/lists/*
#
RUN rm -rf /requirements
RUN mkdir /code/
WORKDIR /code/
ADD . /code/
COPY ./scripts /scripts
RUN chmod +x /scripts/*
RUN mkdir -p /vol/web/media
RUN mkdir -p /vol/web/static
RUN groupadd -r user
RUN useradd --no-log-init -r -g user user
RUN chown -R user:user /vol
RUN chmod -R 755 /vol/web
USER user
Python Modules -
aiohttp==3.8.1
aiosignal==1.2.0
amqp==5.1.1
anyio==3.6.1
asgiref==3.5.2
asttokens==2.0.5
async-timeout==4.0.2
attrs==21.4.0
aws-requests-auth==0.4.3
Babel==2.9.1
backcall==0.2.0
billiard==3.6.4.0
black==22.6.0
boto3==1.9.62
botocore==1.12.253
bytecode==0.13.0
celery==5.2.7
certifi==2022.6.15
charset-normalizer==2.0.12
click==8.1.3
click-didyoumean==0.3.0
click-plugins==1.1.1
click-repl==0.2.0
ddsketch==2.0.4
ddtrace==1.3.0
decorator==5.1.1
Django==4.0.1
django-appconf==1.0.5
django-cache-memoize==0.1.10
django-compressor==3.1
django-compressor-autoprefixer==0.1.0
django-cors-headers==3.11.0
django-datadog-logger==0.5.0
django-elasticsearch-dsl==7.2.2
django-elasticsearch-dsl-drf==0.22.4
django-environ==0.8.1
django-extensions==3.1.5
django-libsass==0.9
django-log-request-id==2.0.0
django-nine==0.2.5
django-prometheus==2.2.0
django-sites==0.11
django-storages==1.12.3
django-uuid-upload-path==1.0.0
django-versatileimagefield==2.2
djangorestframework==3.13.1
djangorestframework-gis==0.18
docutils==0.15.2
elasticsearch==7.17.1
elasticsearch-dsl==7.4.0
executing==0.8.3
frozenlist==1.3.0
geographiclib==1.52
geopy==2.2.0
gunicorn==20.1.0
h11==0.12.0
httpcore==0.14.7
httpx==0.21.3
idna==3.3
ipython==8.0.1
jedi==0.18.1
jmespath==0.10.0
JSON-log-formatter==0.5.1
kombu==5.2.4
libsass==0.21.0
matplotlib-inline==0.1.3
multidict==6.0.2
mypy-extensions==0.4.3
packaging==21.3
parso==0.8.3
pathspec==0.9.0
pexpect==4.8.0
pickleshare==0.7.5
Pillow==9.2.0
platformdirs==2.5.2
prometheus-client==0.14.1
prompt-toolkit==3.0.30
protobuf==4.21.2
psycopg2-binary==2.9.3
ptyprocess==0.7.0
pure-eval==0.2.2
Pygments==2.12.0
pyparsing==3.0.9
python-dateutil==2.8.2
python-dotenv==0.19.2
python-magic==0.4.27
pytz==2021.3
rcssmin==1.1.0
regex==2022.1.18
requests==2.27.1
rfc3986==1.5.0
rjsmin==1.2.0
s3transfer==0.1.13
six==1.16.0
sniffio==1.2.0
sqlparse==0.4.2
stack-data==0.3.0
tenacity==8.0.1
tomli==2.0.1
traitlets==5.3.0
typing_extensions==4.3.0
urllib3==1.25.11
uvicorn==0.17.0
vine==5.0.0
wcwidth==0.2.5
whitenoise==5.3.0
yarl==1.7.2
Docker build command -
docker buildx build --push --platform linux/amd64,linux/arm64 -t ${ECR_LATEST_TAGX} -t ${ECR_VERSION_TAGX} --output=type=image --file ../incr.Dockerfile ../
I'm a beginner in neo4j. I'm trying to build tests using embedded neo4j database inside a springboot application. I haven't succeeded since the class DatabaseManagementServiceBuilder is found nowhere Please note I'm using version 4.0.2 Any help please ?
The full classname is org.neo4j.dbms.api.DatabaseManagementServiceBuilder.
Here is a sample class that uses the builder.
I've struggled with using an embedded neo4j db for my tests a few months back as well.
In case you don't find a suitable solution for the embedded version, I ended up starting a real instance of the db...
I adjusted a bit neo4j's official Dockerfile to use jdk instead of jre and was able to run my tests against it.
Here's the Dockerfile, starting from the official 3.4.5-enterprise Dockerfile:
FROM openjdk:8-jdk-slim
RUN apt-get update && apt-get install -y --no-install-recommends \
make && \
rm -rf /var/lib/apt/lists/*
ADD maven-settings.xml /root/.m2/settings.xml
# from official neo4j:3.4.5-enterprise image content (changed base image to use jdk instead of jre)
RUN addgroup --system neo4j && adduser --system --no-create-home --home /var/lib/neo4j --ingroup neo4j neo4j
ENV NEO4J_SHA256=0629f17a99ba90d6900c98f332c775a732cc2ad6298b8df41a2872277b19e6e3 \
NEO4J_TARBALL=neo4j-enterprise-3.4.5-unix.tar.gz \
NEO4J_EDITION=enterprise \
NEO4J_ACCEPT_LICENSE_AGREEMENT=yes \
TINI_VERSION="v0.18.0" \
TINI_SHA256="12d20136605531b09a2c2dac02ccee85e1b874eb322ef6baf7561cd93f93c855"
ARG NEO4J_URI=http://dist.neo4j.org/neo4j-enterprise-3.4.5-unix.tar.gz
RUN apt update \
&& apt install -y \
bash \
curl \
&& curl -L --fail --silent --show-error "https://github.com/krallin/tini/releases/download/${TINI_VERSION}/tini" > /sbin/tini \
&& echo "${TINI_SHA256} /sbin/tini" | sha256sum -c --strict --quiet \
&& chmod +x /sbin/tini \
&& curl --fail --silent --show-error --location --remote-name ${NEO4J_URI} \
&& echo "${NEO4J_SHA256} ${NEO4J_TARBALL}" | sha256sum -c --strict --quiet \
&& tar --extract --file ${NEO4J_TARBALL} --directory /var/lib \
&& mv /var/lib/neo4j-* /var/lib/neo4j \
&& rm ${NEO4J_TARBALL} \
&& mv /var/lib/neo4j/data /data \
&& chown -R neo4j:neo4j /data \
&& chmod -R 777 /data \
&& chown -R neo4j:neo4j /var/lib/neo4j \
&& chmod -R 777 /var/lib/neo4j \
&& ln -s /data /var/lib/neo4j/data
# Install latest su-exec
RUN set -ex; \
\
curl -o /usr/local/bin/su-exec.c https://raw.githubusercontent.com/ncopa/su-exec/master/su-exec.c; \
\
fetch_deps='gcc libc-dev'; \
apt-get update; \
apt-get install -y --no-install-recommends $fetch_deps; \
rm -rf /var/lib/apt/lists/*; \
gcc -Wall \
/usr/local/bin/su-exec.c -o/usr/local/bin/su-exec; \
chown root:root /usr/local/bin/su-exec; \
chmod 0755 /usr/local/bin/su-exec; \
rm /usr/local/bin/su-exec.c; \
\
apt-get purge -y --auto-remove $fetch_deps
ENV PATH /var/lib/neo4j/bin:$PATH
ARG NEO4J_AUTH=neo4j/neo4jtest
ENV NEO4J_AUTH=${NEO4J_AUTH}
WORKDIR /var/lib/neo4j
VOLUME /data
COPY docker-entrypoint.sh /docker-entrypoint.sh
EXPOSE 7474 7473 7687
ENTRYPOINT ["/sbin/tini", "-g", "--", "/docker-entrypoint.sh"]
CMD ["neo4j"]
I used the original docker-entrypoint.sh script.
I have a docker container that serves a webserver. On every startup of the container, I want to excecute a little shell script. The script that has to be executed has only one statement.
/var/www/html/app/Console/cake schema update -y
To achieve this, I created a .sh file called schemaupdate.sh which I copy into the docker container using the dockerfile into the /etc/init.d folder. Furthermore I make it executable and register it to the startup.
COPY schemaupdate.sh /etc/init.d/schemaupdate.sh
chmod 755 /etc/init.d/schemaupdate.sh
update-rc.d schemaupdate.sh defaults
The file is successfully copied into the container. However, the script is not executed when the docker container starts. When I manually call the sh file, everything is running fine.
How can I achieve, that the file / statement is executed on each startup of a container? It is important, that the script is executed at the startup and the container (so the webserver) still continues to run! The script only makes a little update check and after the check the webserver keeps on going.
The container is a debian based container. Here is inital dockerfile.
#start with base Image from php
FROM php:7.3-apache
#install system dependencies and enable PHP modules
RUN apt-get update && apt-get install -y \
libicu-dev \
libpq-dev \
libmcrypt-dev \
mysql-client \
git \
zip \
unzip \
&& rm -r /var/lib/apt/lists/* \
&& docker-php-ext-configure pdo_mysql --with-pdo-mysql=mysqlnd \
&& docker-php-ext-install \
intl \
mbstring \
pcntl \
pdo_mysql \
pdo_pgsql \
pgsql \
opcache
# zip \
# mcrypt \
#configure imap for mails
RUN apt-get update && \
apt-get install -y \
libc-client-dev libkrb5-dev && \
rm -r /var/lib/apt/lists/*
RUN docker-php-ext-configure imap --with-kerberos --with-imap-ssl && \
docker-php-ext-install -j$(nproc) imap
#install mcrypt
RUN apt-get update \
&& apt-get install -y libmcrypt-dev \
&& rm -rf /var/lib/apt/lists/* \
&& pecl install mcrypt-1.0.2 \
&& docker-php-ext-enable mcrypt
#install composer
RUN curl -sS https://getcomposer.org/installer | php -- --install-dir=/usr/bin/ --filename=composer
#set our application folder as an environment variable
ENV APP_HOME /var/www/html
#change uid and gid of apache to docker user uid/gid
RUN usermod -u 1000 www-data && groupmod -g 1000 www-data
#change the web_root to cakephp /var/www/html/webroot folder
#RUN sed -i -e "s/html/html\/webroot/g" /etc/apache2/sites-enabled/000-default.conf
# enable apache module rewrite
RUN a2enmod rewrite
#copy source files and run composer
#COPY src/ /var/www/html
#COPY src/ $APP_HOME
# install all PHP dependencies
#RUN composer install --no-interaction
#SET Volume
VOLUME /var/www/html/
#change ownership of our applications
RUN chown -R www-data:www-data $APP_HOME
#SET ENV VARIABLES
COPY schemaupdate.sh /etc/init.d/schemaupdate.sh
chmod 755 /etc/init.d/schemaupdate.sh
update-rc.d schemaupdate.sh defaults
EXPOSE 80
/etc/init.d/ isn't relevant. Containers aren't full blown operating systems with a heavyweight SysV init-style startup sequence. They run a single command, that's it.
You should either add the command as a RUN statement in the Dockerfile so its results are baked into the image, or you should have it called directly by the container's CMD or ENTRYPOINT directive.
I Finally used the Entrypoint. I deleted the COPY, chmod and update-rc. The Entrypoint looks like the following.
ENTRYPOINT [ "sh", "-c", "/var/www/html/app/Console/cake schema update -y && /var/www/html/app/Console/cake schema update -y && /usr/sbin/apachectl -D FOREGROUND"]
It first starts the update statment. After this is finished (so terminated), the apachectl is called to keep the webserver running.
Docker Version: 17.09.1-ce
I am beginner in docker and I am trying to build docker image on centos. The below is the snippet of docker file i am having
FROM centos
RUN yum -y install samba-common && \
yum -y install gcc perl mingw-binutils-generic mingw-filesystem-base mingw32-binutils mingw32-cpp mingw32-crt mingw32-filesystem mingw32-gcc mingw32-headers mingw64-binutils mingw64-cpp mingw64-crt mingw64-filesystem mingw64-gcc mingw64-headers libcom_err-devel popt-devel zlib-devel zlib-static glibc-devel glibc-static python-devel && \
yum -y install git gnutls-devel libacl1-dev libacl-devel libldap2-dev openldap-devel && \
yum -y remove libbsd-devel && \
WORKDIR /usr/src && \
git clone git://xxxxxxxx/p/winexe/winexe-waf winexe-winexe-wafgit && \
WORKDIR /usr/src/samba && \
WORKDIR /usr/src/winexe-winexe-wafgit/source && \
head -n -3 wscript_build > tmp.txt && cp -f tmp.txt wscript_build && \
echo -e '\t'"stlib='smb_static bsd z resolv rt'", >> wscript_build && \
echo -e '\t'"lib='dl gnutls'", >> wscript_build && \
echo -e '\t'")" >> wscript_build && \
rm -rf tmp.txt && \
./waf --samba-dir=../../samba configure build
I tried with the normal cd which not work. WORKDIR does not work. How I can set working directory in Dockerfile?
I am getting an error like below using the above Dockerfile
/bin/sh: WORKDIR: command not found
The command '/bin/sh -c yum -y install samba-common && yum -y install gcc perl mingw-binutils-generic mingw-filesystem-base mingw32-binutils mingw32-cpp mingw32-crt mingw32-filesystem mingw32-gcc mingw32-headers mingw64-binutils mingw64-cpp mingw64-crt mingw64-filesystem mingw64-gcc mingw64-headers libcom_err-devel popt-devel zlib-devel zlib-static glibc-devel glibc-static python-devel && yum -y install git gnutls-devel libacl1-dev libacl-devel libldap2-dev openldap-devel && yum -y remove libbsd-devel && WORKDIR /usr/src && git clone git://xxxxxxxx/p/winexe/winexe-waf winexe-winexe-wafgit && WORKDIR /usr/src/samba && git reset --hard a6bda1f2bc85779feb9680bc74821da5ccd401c5 && WORKDIR /usr/src/winexe-winexe-wafgit/source && head -n -3 wscript_build > tmp.txt && cp -f tmp.txt wscript_build && echo -e '\t'"stlib='smb_static bsd z resolv rt'", >> wscript_build && echo -e '\t'"lib='dl gnutls'", >> wscript_build && echo -e '\t'")" >> wscript_build && rm -rf tmp.txt && ./waf --samba-dir=../../samba configure build' returned a non-zero code: 127
When I tried with normal cd instead work WORKDIR then I got below error
/bin/sh: line 0: cd: /usr/src/samba: No such file or directory but with sudo i can go into it. Then I tried to include sudo cd directory in docker file then it said no sudo found
UPDATE 1:
This is how I started build
sudo docker build -t abwinexeimage -f ./abwinexeimage . The build got successfully but unfortunately when i list images i dont see any image with tag namme of abwinexeimage.
I dont understand what is that first entry with tag name as none. what it represents ? it shows size of 1.23 GB, Do I really need this image or can i safely delete ?
When I started build first line showed that Sending build context to Docker daemon 303.9MB that means in that image list repository named centos with tag name latest is one the right image which I built ? I assuming so as the size says 202 MB ?
Then I issued docker ps, but no container running, then issued docker ps -a to see stopped containers
Then I tried to run image as container..
Now tried to issue docker ps to check whether container is running
Now i can tell you why i am so concerned about multiple containers present. Actually I wanted to manually CD into cd /usr/src/samba this inside docker container to verify if changes done via docker file got updated correctly or not. Now since i have multiple containers, really not sure which container I need to look into. In that stunt, i tried to start all containers, then manually issue
docker exec -it CONTAINER_NAME [bash | sh] to verify if i am able to find that file system there. This is the reason why I asked whether I can have single container so that i can easily find the file system there,my understanding is since multiple RUN statements created different layers, then its difficult for me to find in which container my file system resides, so that I can CD into it.. sorry for big explanation... I am trying to understand concepts better. Your comments please..
You need to use WORKDIR as a Dockerfile instruction, instead of using it together with run instruction.
RUN has 2 forms:
RUN (shell form, the command is run in a shell, which by default is /bin/sh -c on Linux or cmd /S /C on Windows) RUN
["executable", "param1", "param2"] (exec form)
WORKDIR
WORKDIR /path/to/workdir The WORKDIR instruction sets the working
directory for any RUN, CMD, ENTRYPOINT, COPY and ADD instructions that
follow it in the Dockerfile
FROM centos
RUN yum -y install samba-common && \
yum -y install gcc perl mingw-binutils-generic mingw-filesystem-base mingw32-binutils mingw32-cpp mingw32-crt mingw32-filesystem mingw32-gcc mingw32-headers mingw64-binutils mingw64-cpp mingw64-crt mingw64-filesystem mingw64-gcc mingw64-headers libcom_err-devel popt-devel zlib-devel zlib-static glibc-devel glibc-static python-devel && \
yum -y install git gnutls-devel libacl1-dev libacl-devel libldap2-dev openldap-devel && \
yum -y remove libbsd-devel
WORKDIR /usr/src
#use git clone with RUN not with WORKDIR
RUN git clone git://xxxxxxxx/p/winexe/winexe-waf winexe-winexe-wafgit
#So start it with new line
WORKDIR /usr/src/samba
WORKDIR /usr/src/winexe-winexe-wafgit/source
#start RUN with new line
RUN head -n -3 wscript_build > tmp.txt && cp -f tmp.txt wscript_build && \
echo -e '\t'"stlib='smb_static bsd z resolv rt'", >> wscript_build && \
echo -e '\t'"lib='dl gnutls'", >> wscript_build && \
echo -e '\t'")" >> wscript_build && \
rm -rf tmp.txt && \
./waf --samba-dir=../../samba configure build
I am using this http://fhirtest.uhn.ca/baseDstu2 test FHIR server and it worked okay so far.
Now I am getting an HTTP-500 - Failed to Call Access Method exception.
Anyone has any idea on what has gone wrong?
This happens frequently. Probably because someone tested weird queries or similar that put the server in an unstable status.
I suggest posting a comment in https://chat.fhir.org/#narrow/stream/hapi to get the server restarted,
or install http://hapifhir.io/doc_cli.html which does basically the same but you have full control.
I built a Dockerfile:
FROM debian:sid
MAINTAINER Günter Zöchbauer <guenter#yyy.com>
ENV DEBIAN_FRONTEND noninteractive
RUN \
apt-get -q update && \
DEBIAN_FRONTEND=noninteractive && \
apt-get install --no-install-recommends -y -q \
apt-transport-https \
apt-utils \
wget \
bzip2 \
default-jdk
# net-tools sudo procps telnet
RUN \
apt-get update && \
rm -rf /var/lib/apt/lists/*
https://github.com/jamesagnew/hapi-fhir/releases/download/v2.0/hapi-fhir-2.0-cli.tar.bz2 && \
ADD hapi-* /hapi_fhir_cli/
RUN ls -la
RUN ls -la /hapi_fhir_cli
ADD prepare_server.sh /hapi_fhir_cli/
RUN \
cd /hapi_fhir_cli && \
bash -c /hapi_fhir_cli/prepare_server.sh
ADD start.sh /hapi_fhir_cli/
WORKDIR /hapi_fhir_cli
EXPOSE 5555
ENTRYPOINT ["/hapi_fhir_cli/start.sh"]
Which requires in the same directory as the Dockerfile
prepare_server.sh
#!/usr/bin/env bash
ls -la
./hapi-fhir-cli run-server --allow-external-refs &
while ! timeout 1 bash -c "echo > /dev/tcp/localhost/8080"; do sleep 10; done
./hapi-fhir-cli upload-definitions -t http://localhost:8080/baseDstu2
./hapi-fhir-cli upload-examples -c -t http://localhost:8080/baseDstu2
start.sh
#!/usr/bin/env bash
cd /hapi_fhir_cli
./hapi-fhir-cli run-server --allow-external-refs -p 5555
Build
docker build myname/hapi_fhir_cli_dstu2 -t . #--no-cache
Run
docker run -d -p 5555:5555 [image id from docker build]
Hope this helps.