I am trying to setup my project dependencies with my M1 Macbook.
First step : I tried to run pip3 install -r requirements.txt (using bash - ARM64) and got the below error with a particular package.
ERROR: Could not find a version that satisfies the requirement higra>=0.6.2 (from versions: none)
After some research, I got to know that the higra package is not yet supported with ARM architecture. As a workaround, I was told to run the pip3 install -r requirements.txt with rosetta terminal (x86_64 architecture).
Second step: I run the pip3 install with rosetta. I did not get the error from the first step (That package got installed successfully). However, I now get the below error
Running setup.py install for psycopg2 ... error
error: subprocess-exited-with-error
× Running setup.py install for psycopg2 did not run successfully.
│ exit code: 1
╰─> [237 lines of output]
running install
running build
running build_py
creating build
creating build/lib.macosx-10.14-x86_64-3.8
creating build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/_json.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/extras.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/errorcodes.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/tz.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/_range.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/_ipaddress.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/__init__.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/extensions.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/errors.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/sql.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
copying lib/pool.py -> build/lib.macosx-10.14-x86_64-3.8/psycopg2
running build_ext
building 'psycopg2._psycopg' extension
creating build/temp.macosx-10.14-x86_64-3.8
creating build/temp.macosx-10.14-x86_64-3.8/psycopg
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/psycopgmodule.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/psycopgmodule.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/green.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/green.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/pqpath.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/pqpath.o
psycopg/pqpath.c:139:17: warning: implicit conversion from enumeration type 'ConnStatusType' to different enumeration type 'ExecStatusType' [-Wenum-conversion]
PQstatus(conn->pgconn) : PQresultStatus(*pgres)));
^~~~~~~~~~~~~~~~~~~~~~
psycopg/pqpath.c:1723:11: warning: code will never be executed [-Wunreachable-code]
ret = 1;
^
psycopg/pqpath.c:1828:17: warning: implicit conversion from enumeration type 'ConnStatusType' to different enumeration type 'ExecStatusType' [-Wenum-conversion]
PQstatus(curs->conn->pgconn) : PQresultStatus(curs->pgres)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
3 warnings generated.
psycopg/pqpath.c:139:17: warning: implicit conversion from enumeration type 'ConnStatusType' to different enumeration type 'ExecStatusType' [-Wenum-conversion]
PQstatus(conn->pgconn) : PQresultStatus(*pgres)));
^~~~~~~~~~~~~~~~~~~~~~
psycopg/pqpath.c:1723:11: warning: code will never be executed [-Wunreachable-code]
ret = 1;
^
psycopg/pqpath.c:1828:17: warning: implicit conversion from enumeration type 'ConnStatusType' to different enumeration type 'ExecStatusType' [-Wenum-conversion]
PQstatus(curs->conn->pgconn) : PQresultStatus(curs->pgres)));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
3 warnings generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/utils.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/utils.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/bytes_format.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/bytes_format.o
In file included from psycopg/bytes_format.c:82:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
In file included from psycopg/bytes_format.c:82:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/libpq_support.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/libpq_support.o
In file included from psycopg/libpq_support.c:30:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
In file included from psycopg/libpq_support.c:30:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/win32_support.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/win32_support.o
In file included from psycopg/win32_support.c:28:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
In file included from psycopg/win32_support.c:28:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/solaris_support.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/solaris_support.o
In file included from psycopg/solaris_support.c:29:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
In file included from psycopg/solaris_support.c:29:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/aix_support.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/aix_support.o
In file included from psycopg/aix_support.c:29:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
In file included from psycopg/aix_support.c:29:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/connection_int.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/connection_int.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/connection_type.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/connection_type.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/cursor_int.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/cursor_int.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/cursor_type.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/cursor_type.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/column_type.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/column_type.o
In file included from psycopg/column_type.c:28:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
In file included from psycopg/column_type.c:28:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/replication_connection_type.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/replication_connection_type.o
In file included from psycopg/replication_connection_type.c:28:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
In file included from psycopg/replication_connection_type.c:28:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/replication_cursor_type.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/replication_cursor_type.o
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/replication_message_type.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/replication_message_type.o
In file included from psycopg/replication_message_type.c:28:
In file included from ./psycopg/psycopg.h:38:
./psycopg/config.h:69:13: warning: unused function 'Dprintf' [-Wunused-function]
static void Dprintf(const char *fmt, ...)
^
1 warning generated.
....
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -iwithsysroot/System/Library/Frameworks/System.framework/PrivateHeaders -iwithsysroot/Applications/Xcode.app/Contents/Developer/Library/Frameworks/Python3.framework/Versions/3.8/Headers -arch arm64 -arch x86_64 -Werror=implicit-function-declaration -DPSYCOPG_VERSION=2.9.3 (dt dec pq3 ext lo64) -DPSYCOPG_DEBUG=1 -DPG_VERSION_NUM=140002 -DHAVE_LO64=1 -DPSYCOPG_DEBUG=1 -I/Users/I323017/Documents/GitHub/rec-id-service/rec-id-python/include -I/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/include/python3.8 -I. -I/opt/homebrew/opt/libpq/include -I/opt/homebrew/opt/libpq/include/postgresql/server -c psycopg/typecast.c -o build/temp.macosx-10.14-x86_64-3.8/psycopg/typecast.o
clang -bundle -undefined dynamic_lookup -arch arm64 -arch x86_64 -Wl,-headerpad,0x1000 build/temp.macosx-10.14-x86_64-3.8/psycopg/psycopgmodule.o build/temp.macosx-10.14-x86_64-3.8/psycopg/green.o build/temp.macosx-10.14-x86_64-3.8/psycopg/pqpath.o build/temp.macosx-10.14-x86_64-3.8/psycopg/utils.o build/temp.macosx-10.14-x86_64-3.8/psycopg/bytes_format.o build/temp.macosx-10.14-x86_64-3.8/psycopg/libpq_support.o build/temp.macosx-10.14-x86_64-3.8/psycopg/win32_support.o build/temp.macosx-10.14-x86_64-3.8/psycopg/solaris_support.o build/temp.macosx-10.14-x86_64-3.8/psycopg/aix_support.o build/temp.macosx-10.14-x86_64-3.8/psycopg/connection_int.o build/temp.macosx-10.14-x86_64-3.8/psycopg/connection_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/cursor_int.o build/temp.macosx-10.14-x86_64-3.8/psycopg/cursor_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/column_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/replication_connection_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/replication_cursor_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/replication_message_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/diagnostics_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/error_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/conninfo_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/lobject_int.o build/temp.macosx-10.14-x86_64-3.8/psycopg/lobject_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/notify_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/xid_type.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_asis.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_binary.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_datetime.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_list.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_pboolean.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_pdecimal.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_pint.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_pfloat.o build/temp.macosx-10.14-x86_64-3.8/psycopg/adapter_qstring.o build/temp.macosx-10.14-x86_64-3.8/psycopg/microprotocols.o build/temp.macosx-10.14-x86_64-3.8/psycopg/microprotocols_proto.o build/temp.macosx-10.14-x86_64-3.8/psycopg/typecast.o -L/opt/homebrew/opt/libpq/lib -lpq -lssl -lcrypto -o build/lib.macosx-10.14-x86_64-3.8/psycopg2/_psycopg.cpython-38-darwin.so
ld: library not found for -lssl
clang: error: linker command failed with exit code 1 (use -v to see invocation)
error: command 'clang' failed with exit status 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: legacy-install-failure
× Encountered error while trying to install package.
╰─> psycopg2
note: This is an issue with the package mentioned above, not pip.
hint: See above for output from the failure.
I don't see an option to go back to bash (ARM) as the packages are not supported there. Could anyone please help me to solve this issue with Rosetta (x86_64)?
Related
While compiling a Ruby gem's native extension, I get this error according to logs:
LD_LIBRARY_PATH=.:/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/lib "gcc-12 -M -o conftest -I/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/include/ruby-3.1.0/x86_64-linux -I/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/include/ruby-3.1.0/ruby/backward -I/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/include/ruby-3.1.0 -I. -I/opt/local/include -I/usr/local/include -I/opt/homebrew/include -I/usr/include -I/home/linuxbrew/.linuxbrew/opt/libyaml/include -I/home/linuxbrew/.linuxbrew/opt/openssl#3/include -I/home/linuxbrew/.linuxbrew/opt/readline/include -O3 -fno-fast-math -ggdb3 -Wall -Wextra -Wdeprecated-declarations -Wduplicated-cond -Wimplicit-function-declaration -Wimplicit-int -Wmisleading-indentation -Wpointer-arith -Wwrite-strings -Wold-style-definition -Wimplicit-fallthrough=0 -Wmissing-noreturn -Wno-cast-function-type -Wno-constant-logical-operand -Wno-long-long -Wno-missing-field-initializers -Wno-overlength-strings -Wno-packed-bitfield-compat -Wno-parentheses-equality -Wno-self-assign -Wno-tautological-compare -Wno-unused-parameter -Wno-unused-value -Wsuggest-attribute=format -Wsuggest-attribute=noreturn -Wunused-variable -Wundef -fPIC conftest.c -L. -L/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/lib -Wl,-rpath,/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/lib -L/opt/local/lib -Wl,-rpath,/opt/local/lib -L/usr/local/lib -Wl,-rpath,/usr/local/lib -L/opt/homebrew/lib -Wl,-rpath,/opt/homebrew/lib -L/usr/lib -Wl,-rpath,/usr/lib -L/home/linuxbrew/.linuxbrew/opt/libyaml/lib -Wl,-rpath,/home/linuxbrew/.linuxbrew/opt/libyaml/lib -L/home/linuxbrew/.linuxbrew/opt/openssl#3/lib -Wl,-rpath,/home/linuxbrew/.linuxbrew/opt/openssl#3/lib -L/home/linuxbrew/.linuxbrew/opt/readline/lib -Wl,-rpath,/home/linuxbrew/.linuxbrew/opt/readline/lib -L. -fstack-protector-strong -L/home/linuxbrew/.linuxbrew/opt/libyaml/lib -Wl,-rpath,/home/linuxbrew/.linuxbrew/opt/libyaml/lib -L/home/linuxbrew/.linuxbrew/opt/openssl#3/lib -Wl,-rpath,/home/linuxbrew/.linuxbrew/opt/openssl#3/lib -L/home/linuxbrew/.linuxbrew/opt/readline/lib -Wl,-rpath,/home/linuxbrew/.linuxbrew/opt/readline/lib -rdynamic -Wl,-export-dynamic -Wl,--no-as-needed -Wl,-rpath,/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/lib -L/home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/lib -lruby -lm -lc"
In file included from /home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/include/ruby-3.1.0/ruby/defines.h:16,
from /home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/include/ruby-3.1.0/ruby/ruby.h:25,
from /home/linuxbrew/.linuxbrew/Cellar/ruby#3.1/3.1.3_1/include/ruby-3.1.0/ruby.h:38,
from conftest.c:1:
/usr/include/stdio.h:781:10: fatal error: bits/sys_errlist.h: No such file or directory
781 | #include <bits/sys_errlist.h>
| ^~~~~~~~~~~~~~~~~~~~
compilation terminated.
checked program was:
/* begin */
1: #include "ruby.h"
2:
3: int main(int argc, char **argv)
4: {
5: return !!argv[argc];
6: }
/* end */
The problem is that in the -I arguments you can see -I/opt/homebrew/include -I/usr/include, and the first of these directories has /opt/homebrew/include/stdio.h which doesn't contain #include <bits/sys_errlist.h>. As far as I understand https://gcc.gnu.org/onlinedocs/gcc/Directory-Options.html, it should be used instead of /usr/include/stdio.h. What am I missing and how can I fix the problem?
Versions:
WSL 1.0.3.0
Ubuntu 20.04
Homebrew GCC 12.2.0
Homebrew Ruby 3.1.3
The awful (but working for me) workaround:
Rename /usr/include;
Compile;
Rename it back.
I am trying to install VisualSFM on my MacBook Pro mid-2015 running High Sierra for a photogrammetry project I am currently working on with a professor. To do the install I am using Dan Monaghan's installer along with this video to do the install;however, when I run the installer, I get this error:
==> make install
Last 15 lines from /Users/Steven/Library/Logs/Homebrew/gtk+/02.make:
libtool: compile: clang -DHAVE_CONFIG_H -I. -I../.. - DG_LOG_DOMAIN=\"Gdk\" -DGDK_COMPILATION -I../.. -I../../gdk -I../../gdk -DG_DISABLE_CAST_CHECKS -DDISABLE_VISIBILITY -D_REENTRANT -I/usr/local/Cellar/pcre/8.42/include -I/usr/local/Cellar/glib/2.56.1/include/gio-unix-2.0/ -I/usr/local/Cellar/glib/2.56.1/include/glib-2.0 -I/usr/local/Cellar/glib/2.56.1/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/libpng/1.6.34/include/libpng16 -I/usr/local/Cellar/gdk-pixbuf/2.36.12/include/gdk-pixbuf-2.0 -I/usr/local/opt/freetype/include/freetype2 -I/usr/local/Cellar/fontconfig/2.13.0/include -I/usr/local/Cellar/pixman/0.34.0_1/include/pixman-1 -I/usr/local/Cellar/cairo/1.14.12/include/cairo -I/usr/local/Cellar/fribidi/1.0.4/include/fribidi -I/usr/local/Cellar/graphite2/1.3.11/include -I/usr/local/Cellar/harfbuzz/1.8.0/include/harfbuzz -I/usr/local/Cellar/pango/1.42.1/include/pango-1.0 -I/opt/X11/include -I/opt/X11/include/cairo -I/opt/X11/include -DG_DISABLE_SINGLE_INCLUDES -DATK_DISABLE_SINGLE_INCLUDES -DGDK_PIXBUF_DISABLE_SINGLE_INCLUDES -DGTK_DISABLE_SINGLE_INCLUDES -I/opt/X11/include -g -O2 -Wall -c gdkcursor-x11.c -fno-common -DPIC -o .libs/gdkcursor-x11.o
libtool: compile: clang -DHAVE_CONFIG_H -I. -I../.. -DG_LOG_DOMAIN=\"Gdk\" -DGDK_COMPILATION -I../.. -I../../gdk -I../../gdk -DG_DISABLE_CAST_CHECKS -DDISABLE_VISIBILITY -D_REENTRANT -I/usr/local/Cellar/pcre/8.42/include -I/usr/local/Cellar/glib/2.56.1/include/gio-unix-2.0/ -I/usr/local/Cellar/glib/2.56.1/include/glib-2.0 -I/usr/local/Cellar/glib/2.56.1/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/libpng/1.6.34/include/libpng16 -I/usr/local/Cellar/gdk-pixbuf/2.36.12/include/gdk-pixbuf-2.0 -I/usr/local/opt/freetype/include/freetype2 -I/usr/local/Cellar/fontconfig/2.13.0/include -I/usr/local/Cellar/pixman/0.34.0_1/include/pixman-1 -I/usr/local/Cellar/cairo/1.14.12/include/cairo -I/usr/local/Cellar/fribidi/1.0.4/include/fribidi -I/usr/local/Cellar/graphite2/1.3.11/include -I/usr/local/Cellar/harfbuzz/1.8.0/include/harfbuzz -I/usr/local/Cellar/pango/1.42.1/include/pango-1.0 -I/opt/X11/include -I/opt/X11/include/cairo -I/opt/X11/include -DG_DISABLE_SINGLE_INCLUDES -DATK_DISABLE_SINGLE_INCLUDES -DGDK_PIXBUF_DISABLE_SINGLE_INCLUDES -DGTK_DISABLE_SINGLE_INCLUDES -I/opt/X11/include -g -O2 -Wall -c gdkapplaunchcontext-x11.c -fno-common -DPIC -o .libs/gdkapplaunchcontext-x11.o
libtool: compile: clang -DHAVE_CONFIG_H -I. -I../.. -DG_LOG_DOMAIN=\"Gdk\" -DGDK_COMPILATION -I../.. -I../../gdk -I../../gdk -DG_DISABLE_CAST_CHECKS -DDISABLE_VISIBILITY -D_REENTRANT -I/usr/local/Cellar/pcre/8.42/include -I/usr/local/Cellar/glib/2.56.1/include/gio-unix-2.0/ -I/usr/local/Cellar/glib/2.56.1/include/glib-2.0 -I/usr/local/Cellar/glib/2.56.1/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/libpng/1.6.34/include/libpng16 -I/usr/local/Cellar/gdk-pixbuf/2.36.12/include/gdk-pixbuf-2.0 -I/usr/local/opt/freetype/include/freetype2 -I/usr/local/Cellar/fontconfig/2.13.0/include -I/usr/local/Cellar/pixman/0.34.0_1/include/pixman-1 -I/usr/local/Cellar/cairo/1.14.12/include/cairo -I/usr/local/Cellar/fribidi/1.0.4/include/fribidi -I/usr/local/Cellar/graphite2/1.3.11/include -I/usr/local/Cellar/harfbuzz/1.8.0/include/harfbuzz -I/usr/local/Cellar/pango/1.42.1/include/pango-1.0 -I/opt/X11/include -I/opt/X11/include/cairo -I/opt/X11/include -DG_DISABLE_SINGLE_INCLUDES -DATK_DISABLE_SINGLE_INCLUDES -DGDK_PIXBUF_DISABLE_SINGLE_INCLUDES -DGTK_DISABLE_SINGLE_INCLUDES -I/opt/X11/include -g -O2 -Wall -c gdkdisplay-x11.c -fno-common -DPIC -o .libs/gdkdisplay-x11.o
libtool: compile: clang -DHAVE_CONFIG_H -I. -I../.. -DG_LOG_DOMAIN=\"Gdk\" -DGDK_COMPILATION -I../.. -I../../gdk -I../../gdk -DG_DISABLE_CAST_CHECKS -DDISABLE_VISIBILITY -D_REENTRANT -I/usr/local/Cellar/pcre/8.42/include -I/usr/local/Cellar/glib/2.56.1/include/gio-unix-2.0/ -I/usr/local/Cellar/glib/2.56.1/include/glib-2.0 -I/usr/local/Cellar/glib/2.56.1/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/libpng/1.6.34/include/libpng16 -I/usr/local/Cellar/gdk-pixbuf/2.36.12/include/gdk-pixbuf-2.0 -I/usr/local/opt/freetype/include/freetype2 -I/usr/local/Cellar/fontconfig/2.13.0/include -I/usr/local/Cellar/pixman/0.34.0_1/include/pixman-1 -I/usr/local/Cellar/cairo/1.14.12/include/cairo -I/usr/local/Cellar/fribidi/1.0.4/include/fribidi -I/usr/local/Cellar/graphite2/1.3.11/include -I/usr/local/Cellar/harfbuzz/1.8.0/include/harfbuzz -I/usr/local/Cellar/pango/1.42.1/include/pango-1.0 -I/opt/X11/include -I/opt/X11/include/cairo -I/opt/X11/include -DG_DISABLE_SINGLE_INCLUDES -DATK_DISABLE_SINGLE_INCLUDES -DGDK_PIXBUF_DISABLE_SINGLE_INCLUDES -DGTK_DISABLE_SINGLE_INCLUDES -I/opt/X11/include -g -O2 -Wall -c gdkdrawable-x11.c -fno-common -DPIC -o .libs/gdkdrawable-x11.o
libtool: compile: clang -DHAVE_CONFIG_H -I. -I../.. -DG_LOG_DOMAIN=\"Gdk\" -DGDK_COMPILATION -I../.. -I../../gdk -I../../gdk -DG_DISABLE_CAST_CHECKS -DDISABLE_VISIBILITY -D_REENTRANT -I/usr/local/Cellar/pcre/8.42/include -I/usr/local/Cellar/glib/2.56.1/include/gio-unix-2.0/ -I/usr/local/Cellar/glib/2.56.1/include/glib-2.0 -I/usr/local/Cellar/glib/2.56.1/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/libpng/1.6.34/include/libpng16 -I/usr/local/Cellar/gdk-pixbuf/2.36.12/include/gdk-pixbuf-2.0 -I/usr/local/opt/freetype/include/freetype2 -I/usr/local/Cellar/fontconfig/2.13.0/include -I/usr/local/Cellar/pixman/0.34.0_1/include/pixman-1 -I/usr/local/Cellar/cairo/1.14.12/include/cairo -I/usr/local/Cellar/fribidi/1.0.4/include/fribidi -I/usr/local/Cellar/graphite2/1.3.11/include -I/usr/local/Cellar/harfbuzz/1.8.0/include/harfbuzz -I/usr/local/Cellar/pango/1.42.1/include/pango-1.0 -I/opt/X11/include -I/opt/X11/include/cairo -I/opt/X11/include -DG_DISABLE_SINGLE_INCLUDES -DATK_DISABLE_SINGLE_INCLUDES -DGDK_PIXBUF_DISABLE_SINGLE_INCLUDES -DGTK_DISABLE_SINGLE_INCLUDES -I/opt/X11/include -g -O2 -Wall -c gdkdnd-x11.c -fno-common -DPIC -o .libs/gdkdnd-x11.o
libtool: compile: clang -DHAVE_CONFIG_H -I. -I../.. -DG_LOG_DOMAIN=\"Gdk\" -DGDK_COMPILATION -I../.. -I../../gdk -I../../gdk -DG_DISABLE_CAST_CHECKS -DDISABLE_VISIBILITY -D_REENTRANT -I/usr/local/Cellar/pcre/8.42/include -I/usr/local/Cellar/glib/2.56.1/include/gio-unix-2.0/ -I/usr/local/Cellar/glib/2.56.1/include/glib-2.0 -I/usr/local/Cellar/glib/2.56.1/lib/glib-2.0/include -I/usr/local/opt/gettext/include -I/usr/local/Cellar/libpng/1.6.34/include/libpng16 -I/usr/local/Cellar/gdk-pixbuf/2.36.12/include/gdk-pixbuf-2.0 -I/usr/local/opt/freetype/include/freetype2 -I/usr/local/Cellar/fontconfig/2.13.0/include -I/usr/local/Cellar/pixman/0.34.0_1/include/pixman-1 -I/usr/local/Cellar/cairo/1.14.12/include/cairo -I/usr/local/Cellar/fribidi/1.0.4/include/fribidi -I/usr/local/Cellar/graphite2/1.3.11/include -I/usr/local/Cellar/harfbuzz/1.8.0/include/harfbuzz -I/usr/local/Cellar/pango/1.42.1/include/pango-1.0 -I/opt/X11/include -I/opt/X11/include/cairo -I/opt/X11/include -DG_DISABLE_SINGLE_INCLUDES -DATK_DISABLE_SINGLE_INCLUDES -DGDK_PIXBUF_DISABLE_SINGLE_INCLUDES -DGTK_DISABLE_SINGLE_INCLUDES -I/opt/X11/include -g -O2 -Wall -c gdkevents-x11.c -fno-common -DPIC -o .libs/gdkevents-x11.o
gdkdrawable-x11.c:32:10: fatal error: 'cairo-xlib.h' file not found
#include <cairo-xlib.h>
^~~~~~~~~~~~~~
1 error generated.
make[3]: *** [gdkdrawable-x11.lo] Error 1
make[3]: *** Waiting for unfinished jobs....
make[2]: *** [install-recursive] Error 1
make[1]: *** [install] Error 2
make: *** [install-recursive] Error 1
Do not report this issue to Homebrew/brew or Homebrew/core!
...
cd build; ar -x ../lib/VisualSFM.a; cd ..;
Package gtk+-2.0 was not found in the pkg-config search path.
Perhaps you should add the directory containing `gtk+-2.0.pc'
to the PKG_CONFIG_PATH environment variable
No package 'gtk+-2.0' found
g++-4.9 -w -o bin/VisualSFM build/*.* -L/usr/local/lib -L/opt/X11/lib -pthread -lGL -lGLU -lX11 -ldl lib/lapack.a lib/blas.a lib/libf2c.a lib/libjpeg.a
Undefined symbols for architecture x86_64:
"_g_cclosure_new", referenced from:
RegisterWin::GetOpenFilePreview(char const*, char const*, int, int) in RegisterGUI.o
"_g_free", referenced from:
RegisterWin::__FileChooserPreview(_GtkFileChooser*, void*) in RegisterGUI.o
RegisterWin::__ComboBoxChanged(_GtkComboBox*, void*) in RegisterGUI.o
...
"_gtk_window_set_type_hint", referenced from:
GlobalTasks::InitLogWindow(char const*, int) in GlobalTasks.o
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make: *** [VisualSFM] Error 1
VSFM application failed to build, halting.
The problem seems to be do to the fact that it requires cairo with x11;however Apple no longer supports cairo with x11 because of XQuartz. I tried brew install --with-x11 cairo but got Warning: cairo: this formula has no --with-x11 option so it will be ignored! I am not sure if it would solve my problem with installing VisualSFM, but is there anyway to install an old version of Cairo with X11?
I am trying to install ruby2.2 in in freebsd 7 i386, but it is throwing below error.
Can someone help how to resolve it
I
# make
CC = /usr/local/bin/gcc48
LD = ld
LDSHARED = /usr/local/bin/gcc48 -shared
CFLAGS = -O3 -fno-fast-math -ggdb3 -Wall -Wextra
-Wno-unused-parameter -Wno-parentheses
-Wno-long-long -Wno-missing-field-initializers
-Wunused-variable -Wpointer-arith
-Wwrite-strings -Wdeclaration-after-statement
-Wimplicit-function-declaration
-ansi -std=iso9899:199409
XCFLAGS = -D_FORTIFY_SOURCE=2 -fstack-protector
-fno-strict-overflow -fvisibility=hidden
-DRUBY_EXPORT -fPIE
CPPFLAGS = -I. -I.ext/include/i386-freebsd7.1 -I./include -I.
DLDFLAGS = -Wl,-soname,showflags -fstack-protector -pie
SOLIBS =
Using built-in specs.
COLLECT_GCC=/usr/local/bin/gcc48
COLLECT_LTO_WRAPPER=
/usr/local/libexec/gcc48/gcc/i386-portbld- freebsd7.1/4.8.3/lto-wrapper
Target: i386-portbld-freebsd7.1
Configured with: ./../gcc-4.8.3/configure
--disable-bootstrap --disable-nls
--enable-gnu-indirect-function
--libdir=/usr/local/lib/gcc48
--libexecdir=/usr/local/libexec/gcc48
--program-suffix=48
--with- as=/usr/local/bin/as
--with-gmp=/usr/local
--with-gxx-include-dir=/usr/local/lib/gcc48/include/c++/
--with-ld=/usr/local/bin/ld
--with-pkgversion='FreeBSD Ports Collection'
--with-system-zlib --disable-libgcj
--enable-languages=c,c++,objc,fortran
--prefix=/usr/local --mandir=/usr/local/man
--infodir=/usr/local/info/gcc48
--build=i386-portbld-freebsd7.1
Thread model: posix
gcc version 4.8.3 (FreeBSD Ports Collection)
compiling math.c
**math.c: In function 'math_log':
**math.c:466:9: internal compiler error: Segmentation fault: 11
d += numbits * log(2); /* log(2**numbits) */****
^
no stack trace because unwind library not available
Please submit a full bug report,
with preprocessed source if appropriate.
I couldn't build opencv with cuda support on Mavericks:
When using cmake -G "Unix Makefiles" -DWITH_CUDA=ON ..
i got error:
-- Configuring incomplete, errors occurred!
Any workaround on this?
(Similar error when using macport too)
CMakeError.log
Determining size of off64_t failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec3929617441/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec3929617441.dir/build.make CMakeFiles/cmTryCompileExec3929617441.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec3929617441.dir/OFF64_T.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec3929617441.dir/OFF64_T.c.o -c /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:19:12: error: use of undeclared identifier 'off64_t'; did you mean 'off_t'?
('0' + ((SIZE / 10000)%10)),
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:17:22: note: expanded from macro 'SIZE'
#define SIZE (sizeof(off64_t))
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:20:12: error: use of undeclared identifier 'off64_t'; did you mean 'off_t'?
('0' + ((SIZE / 1000)%10)),
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:17:22: note: expanded from macro 'SIZE'
#define SIZE (sizeof(off64_t))
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:21:12: error: use of undeclared identifier 'off64_t'; did you mean 'off_t'?
('0' + ((SIZE / 100)%10)),
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:17:22: note: expanded from macro 'SIZE'
#define SIZE (sizeof(off64_t))
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:22:12: error: use of undeclared identifier 'off64_t'; did you mean 'off_t'?
('0' + ((SIZE / 10)%10)),
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:17:22: note: expanded from macro 'SIZE'
#define SIZE (sizeof(off64_t))
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:23:12: error: use of undeclared identifier 'off64_t'; did you mean 'off_t'?
('0' + (SIZE % 10)),
^
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:17:22: note: expanded from macro 'SIZE'
#define SIZE (sizeof(off64_t))
^
5 errors generated.
gmake[1]: *** [CMakeFiles/cmTryCompileExec3929617441.dir/OFF64_T.c.o] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec3929617441/fast] Error 2
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CheckTypeSize/OFF64_T.c:
#include <sys/types.h>
#include <stdint.h>
#include <stddef.h>
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# define KEY '_','_','i','3','8','6'
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# define KEY '_','_','p','p','c','_','_'
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char info_size[] = {'I', 'N', 'F', 'O', ':', 's','i','z','e','[',
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('0' + ((SIZE / 1000)%10)),
('0' + ((SIZE / 100)%10)),
('0' + ((SIZE / 10)%10)),
('0' + (SIZE % 10)),
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' ','k','e','y','[', KEY, ']',
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int main(int argc, char *argv[])
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Determining if the include file io.h exists failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec647810530/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec647810530.dir/build.make CMakeFiles/cmTryCompileExec647810530.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec647810530.dir/CheckIncludeFile.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec647810530.dir/CheckIncludeFile.c.o -c /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c:1:10: fatal error: 'io.h' file not found
#include <io.h>
^
1 error generated.
gmake[1]: *** [CMakeFiles/cmTryCompileExec647810530.dir/CheckIncludeFile.c.o] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec647810530/fast] Error 2
Determining if the function jbg_newlen exists failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec4172827471/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec4172827471.dir/build.make CMakeFiles/cmTryCompileExec4172827471.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec4172827471.dir/CheckFunctionExists.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -DCHECK_FUNCTION_EXISTS=jbg_newlen -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec4172827471.dir/CheckFunctionExists.c.o -c /opt/local/share/cmake-2.8/Modules/CheckFunctionExists.c
Linking C executable cmTryCompileExec4172827471
/opt/local/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec4172827471.dir/link.txt --verbose=1
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -DCHECK_FUNCTION_EXISTS=jbg_newlen -O3 -DNDEBUG -Wl,-search_paths_first -Wl,-headerpad_max_install_names CMakeFiles/cmTryCompileExec4172827471.dir/CheckFunctionExists.c.o -o cmTryCompileExec4172827471
Undefined symbols for architecture x86_64:
"_jbg_newlen", referenced from:
_main in CheckFunctionExists.c.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[1]: *** [cmTryCompileExec4172827471] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec4172827471/fast] Error 2
Determining if the include file linux/videodev.h exists failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec70111243/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec70111243.dir/build.make CMakeFiles/cmTryCompileExec70111243.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec70111243.dir/CheckIncludeFile.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec70111243.dir/CheckIncludeFile.c.o -c /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c:1:10: fatal error: 'linux/videodev.h' file not found
#include <linux/videodev.h>
^
1 error generated.
gmake[1]: *** [CMakeFiles/cmTryCompileExec70111243.dir/CheckIncludeFile.c.o] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec70111243/fast] Error 2
Determining if the include file linux/videodev2.h exists failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec661389614/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec661389614.dir/build.make CMakeFiles/cmTryCompileExec661389614.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec661389614.dir/CheckIncludeFile.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec661389614.dir/CheckIncludeFile.c.o -c /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c:1:10: fatal error: 'linux/videodev2.h' file not found
#include <linux/videodev2.h>
^
1 error generated.
gmake[1]: *** [CMakeFiles/cmTryCompileExec661389614.dir/CheckIncludeFile.c.o] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec661389614/fast] Error 2
Determining if the include file sys/videoio.h exists failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec741892054/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec741892054.dir/build.make CMakeFiles/cmTryCompileExec741892054.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec741892054.dir/CheckIncludeFile.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec741892054.dir/CheckIncludeFile.c.o -c /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c:1:10: fatal error: 'sys/videoio.h' file not found
#include <sys/videoio.h>
^
1 error generated.
gmake[1]: *** [CMakeFiles/cmTryCompileExec741892054.dir/CheckIncludeFile.c.o] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec741892054/fast] Error 2
Determining if the include file libavformat/avformat.h exists failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec2161613468/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec2161613468.dir/build.make CMakeFiles/cmTryCompileExec2161613468.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec2161613468.dir/CheckIncludeFile.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec2161613468.dir/CheckIncludeFile.c.o -c /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c:1:10: fatal error: 'libavformat/avformat.h' file not found
#include <libavformat/avformat.h>
^
1 error generated.
gmake[1]: *** [CMakeFiles/cmTryCompileExec2161613468.dir/CheckIncludeFile.c.o] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec2161613468/fast] Error 2
Determining if the include file ffmpeg/avformat.h exists failed with the following output:
Change Dir: /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp
Run Build Command:/opt/local/bin/gmake "cmTryCompileExec188285781/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTryCompileExec188285781.dir/build.make CMakeFiles/cmTryCompileExec188285781.dir/build
gmake[1]: Entering directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
/opt/local/bin/cmake -E cmake_progress_report /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CMakeFiles 1
Building C object CMakeFiles/cmTryCompileExec188285781.dir/CheckIncludeFile.c.o
/usr/bin/cc -fsigned-char -W -Werror=return-type -Werror=address -Werror=sequence-point -Wformat -Werror=format-security -Wmissing-declarations -Wmissing-prototypes -Wstrict-prototypes -Wundef -Winit-self -Wpointer-arith -Wshadow -Wsign-promo -Wno-narrowing -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -fdiagnostics-show-option -fno-omit-frame-pointer -msse -msse2 -msse3 -O3 -DNDEBUG -o CMakeFiles/cmTryCompileExec188285781.dir/CheckIncludeFile.c.o -c /Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c
/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp/CheckIncludeFile.c:1:10: fatal error: 'ffmpeg/avformat.h' file not found
#include <ffmpeg/avformat.h>
^
1 error generated.
gmake[1]: *** [CMakeFiles/cmTryCompileExec188285781.dir/CheckIncludeFile.c.o] Error 1
gmake[1]: Leaving directory `/Users/caominhvu/Downloads/opencv-2.4.7/build/CMakeFiles/CMakeTmp'
gmake: *** [cmTryCompileExec188285781/fast] Error 2
Here's how I compiled OpenCV 2.4.8 on OSX Mavericks 10.9.1 using Xcode 5.0.2 and CUDA 5.5:
open CMake to set the project, and to the basic configuration
in latest Xcode (I think >= 5) there's no more the gcc compiler, deprecated in favor of clang, so go to the CUDA options of the CMAKE project and change CUDA_HOST_COMPILER to use "/usr/bin/clang". Luckily CUDA 5.5 supports clang and not only gcc
Apparently CUDA 5.5 supports only the older libstdc++ library and not the more modern libc++, so update CUDA_NVCC_FLAGS to tell mvcc to pass tell the nativa compilar to use this older library. Add "-Xcompiler -stdlib=libstdc++; -Xlinker -stdlib=libstdc++"
Tell also the C++ compiler that compiles the rest of the library to use libstdc++: show the advanced options of CMAKE and go to CMAKE to add "-stdlib=libstdc++" to both CMAKE_CXX_FLAGS and CMAKE_EXE_LINKER_FLAGS
For anyone coming here later who may be trying to install from this tutorial. I ran into this problem because my OPENCV_EXTRA_MODULES_PATH was pointing to the wrong directory. I had mine in ~/src/, and not just ~/
I have been developing a bit of code for the last few weeks. The Code is wrapped within a MEX file in MATLAB. Until yesterday my usual test took about 1 second. Suddenly after recompiling the code without changing anything, the same code takes more than 4 seconds.
The only changes happened in a function totally unrelated to the function I am calling. It seems as all compiler optimization has vanished from one second to the other.
Maybe one of you experienced similar happenings in the past and knows how to deal with that?
Thank you for your suggestions.
Edit 1:
As I assume it is something compiler dependent, here the output of the compilation command (using verbose mode)
----------------------------------------------------------------
-> MATLAB = /Applications/MATLAB_R2010b.app
-> CC = gcc-4.0
-> CC flags:
CFLAGS = -fno-common -no-cpp-precomp -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -fexceptions
CDEBUGFLAGS = -g
COPTIMFLAGS = -O2 -DNDEBUG
CLIBS = -L/Applications/MATLAB_R2010b.app/bin/maci64 -lmx -lmex -lmat -lstdc++
arguments = -DMX_COMPAT_32
-> CXX = g++-4.0
-> CXX flags:
CXXFLAGS = -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5
CXXDEBUGFLAGS = -g
CXXOPTIMFLAGS = -O2 -DNDEBUG
CXXLIBS = -L/Applications/MATLAB_R2010b.app/bin/maci64 -lmx -lmex -lmat -lstdc++
arguments = -DMX_COMPAT_32
-> FC = gfortran
-> FC flags:
FFLAGS = -fexceptions -m64 -fbackslash
FDEBUGFLAGS = -g
FOPTIMFLAGS = -O
FLIBS = -L/Applications/MATLAB_R2010b.app/bin/maci64 -lmx -lmex -lmat -L -lgfortran -L -lgfortranbegin
arguments = -DMX_COMPAT_32
-> LD = gcc-4.0
-> Link flags:
LDFLAGS = -Wl,-twolevel_namespace -undefined error -arch x86_64 -Wl,-syslibroot,/Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -bundle -Wl,-exported_symbols_list,/Applications/MATLAB_R2010b.app/extern/lib/maci64/mexFunction.map
LDDEBUGFLAGS = -g
LDOPTIMFLAGS = -O
LDEXTENSION = .mexmaci64
arguments = /usr/lib/libarmadillo.dylib /usr/lib/liblapack.dylib /usr/lib/libblas.dylib
-> LDCXX =
-> Link flags:
LDCXXFLAGS =
LDCXXDEBUGFLAGS =
LDCXXOPTIMFLAGS =
LDCXXEXTENSION =
arguments = /usr/lib/libarmadillo.dylib /usr/lib/liblapack.dylib /usr/lib/libblas.dylib
----------------------------------------------------------------
-> g++-4.0 -c -I/usr/include -I/Applications/MATLAB_R2010b.app/extern/include -I/Applications/MATLAB_R2010b.app/simulink/include -DMATLAB_MEX_FILE -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -DMX_COMPAT_32 -O2 -DNDEBUG "file1.cpp"
-> g++-4.0 -c -I/usr/include -I/Applications/MATLAB_R2010b.app/extern/include -I/Applications/MATLAB_R2010b.app/simulink/include -DMATLAB_MEX_FILE -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -DMX_COMPAT_32 -O2 -DNDEBUG "file2.cpp"
-> g++-4.0 -c -I/usr/include -I/Applications/MATLAB_R2010b.app/extern/include -I/Applications/MATLAB_R2010b.app/simulink/include -DMATLAB_MEX_FILE -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -DMX_COMPAT_32 -O2 -DNDEBUG "file3.cpp"
-> gcc-4.0 -O -Wl,-twolevel_namespace -undefined error -arch x86_64 -Wl,-syslibroot,/Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -bundle -Wl,-exported_symbols_list,/Applications/MATLAB_R2010b.app/extern/lib/maci64/mexFunction.map -o "distanceSplinePoint.mexmaci64" file1.o file2.o file3.o /usr/lib/libarmadillo.dylib /usr/lib/liblapack.dylib /usr/lib/libblas.dylib -L/Applications/MATLAB_R2010b.app/bin/maci64 -lmx -lmex -lmat -lstdc++
As it sometimes is with asking questions: You can spend hours searching for the answer, but once you decided to ask somebody for help you miraculously get the answer in your head.
Clearing the MATLAB-Workspace solved all my problems...
Still, thanks for reading ;)